RNA–Protein interactions for RNA: ENST00000423487.6

ABCA1-203, Transcript of ATP binding cassette subfamily A member 1, humanhuman

TSL 2 BASIC

Gene ABCA1, Length 1,540 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1-203ENST00000423487 RRP7AQ9Y3A4 280 aaKnown RBP21■□□□□ 0.95
ABCA1-203ENST00000423487 MTHFSDQ2M296 383 aaKnown RBP20.99■□□□□ 0.95
ABCA1-203ENST00000423487 SALL2Q9Y467 1007 aaPredicted RBP20.99■□□□□ 0.95
ABCA1-203ENST00000423487 ZBED9Q6R2W3 1325 aa20.99■□□□□ 0.95
ABCA1-203ENST00000423487 RIPK4P57078 832 aa20.99■□□□□ 0.95
ABCA1-203ENST00000423487 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.99■□□□□ 0.951e-7■■□□□ 12.8
ABCA1-203ENST00000423487 MEGF6O75095 1541 aa20.98■□□□□ 0.95
ABCA1-203ENST00000423487 TNKS1BP1Q9C0C2 1729 aaKnown RBP20.97■□□□□ 0.95
ABCA1-203ENST00000423487 CCDC27Q2M243 656 aa20.97■□□□□ 0.95
ABCA1-203ENST00000423487 CDCA7Q9BWT1 371 aaPredicted RBP20.97■□□□□ 0.95
ABCA1-203ENST00000423487 TRPC5Q9UL62 973 aaPredicted RBP20.97■□□□□ 0.95
ABCA1-203ENST00000423487 SPG7Q9UQ90 795 aa20.97■□□□□ 0.95
ABCA1-203ENST00000423487 OVOS2A0A0G2JMS6 1433 aa20.96■□□□□ 0.95
ABCA1-203ENST00000423487 LMOD3Q0VAK6 560 aa20.96■□□□□ 0.95
ABCA1-203ENST00000423487 BARGINQ6ZT62 677 aa20.95■□□□□ 0.94
ABCA1-203ENST00000423487 ZNF530Q6P9A1 599 aaPredicted RBP20.94■□□□□ 0.94
ABCA1-203ENST00000423487 DISP2A7MBM2 1401 aa20.94■□□□□ 0.94
ABCA1-203ENST00000423487 ZNF772Q68DY9 489 aaPredicted RBP20.94■□□□□ 0.94
ABCA1-203ENST00000423487 ZCRB1Q8TBF4 217 aaKnown RBP20.94■□□□□ 0.94
ABCA1-203ENST00000423487 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
ABCA1-203ENST00000423487 ATRNO75882 1429 aa20.93■□□□□ 0.94
ABCA1-203ENST00000423487 PARP4Q9UKK3 1724 aaKnown RBP20.93■□□□□ 0.94
ABCA1-203ENST00000423487 C1orf141Q5JVX7 400 aa20.93■□□□□ 0.94
ABCA1-203ENST00000423487 WWC1Q8IX03 1113 aa20.93■□□□□ 0.94
ABCA1-203ENST00000423487 TRIM35Q9UPQ4 493 aa20.93■□□□□ 0.94
ABCA1-203ENST00000423487 GNAT3A8MTJ3 354 aa20.92■□□□□ 0.94
ABCA1-203ENST00000423487 HTATSF1O43719 755 aaKnown RBP20.92■□□□□ 0.94
ABCA1-203ENST00000423487 AKAP4Q5JQC9 854 aa20.92■□□□□ 0.94
ABCA1-203ENST00000423487 GJD4Q96KN9 370 aaPredicted RBP20.92■□□□□ 0.94
ABCA1-203ENST00000423487 RTF1Q92541 710 aaKnown RBP20.91■□□□□ 0.94
ABCA1-203ENST00000423487 QTRT2Q9H974 415 aaKnown RBP20.91■□□□□ 0.94
ABCA1-203ENST00000423487 ZNF521Q96K83 1311 aa20.91■□□□□ 0.94
ABCA1-203ENST00000423487 MAP3K5Q99683 1374 aa20.91■□□□□ 0.94
ABCA1-203ENST00000423487 ILDR1Q86SU0 546 aaPredicted RBP20.9■□□□□ 0.94
ABCA1-203ENST00000423487 PCDH11XQ9BZA7 1347 aa20.9■□□□□ 0.94
ABCA1-203ENST00000423487 PCDH11YQ9BZA8 1340 aa20.9■□□□□ 0.94
ABCA1-203ENST00000423487 EXOC5O00471 708 aa20.89■□□□□ 0.94
ABCA1-203ENST00000423487 PDE3BQ13370 1112 aa20.89■□□□□ 0.94
ABCA1-203ENST00000423487 WDR63Q8IWG1 891 aa20.89■□□□□ 0.94
ABCA1-203ENST00000423487 IFNL2Q8IZJ0 200 aa20.89■□□□□ 0.94
ABCA1-203ENST00000423487 FAM98CQ17RN3 349 aaKnown RBP20.88■□□□□ 0.93
ABCA1-203ENST00000423487 PKD1L3Q7Z443 1732 aa20.88■□□□□ 0.93
ABCA1-203ENST00000423487 PHKG2P15735 406 aa20.88■□□□□ 0.93
ABCA1-203ENST00000423487 CALD1Q05682 793 aaKnown RBP20.88■□□□□ 0.93
ABCA1-203ENST00000423487 HSP90AB1P08238 724 aaKnown RBP20.87■□□□□ 0.93
ABCA1-203ENST00000423487 GOLGA2Q08379 1002 aa20.87■□□□□ 0.93
ABCA1-203ENST00000423487 DDB1Q16531 1140 aa20.87■□□□□ 0.93
ABCA1-203ENST00000423487 CYP27B1O15528 508 aa20.86■□□□□ 0.93
ABCA1-203ENST00000423487 WNK3Q9BYP7 1800 aa20.86■□□□□ 0.93
ABCA1-203ENST00000423487 TNS2Q63HR2 1409 aa20.85■□□□□ 0.93
ABCA1-203ENST00000423487 GLI3P10071 1580 aa20.85■□□□□ 0.93
ABCA1-203ENST00000423487 DLG5Q8TDM6 1919 aa20.84■□□□□ 0.93
ABCA1-203ENST00000423487 DCTN1Q14203 1278 aa20.84■□□□□ 0.93
ABCA1-203ENST00000423487 MCM10Q7L590 875 aa20.84■□□□□ 0.93
ABCA1-203ENST00000423487 DDX54Q8TDD1 881 aaKnown RBP20.84■□□□□ 0.93
ABCA1-203ENST00000423487 IL16Q14005 1332 aa20.84■□□□□ 0.93
ABCA1-203ENST00000423487 A0A0G2JS52 829 aa20.83■□□□□ 0.93
ABCA1-203ENST00000423487 MYT1Q01538 1121 aa20.83■□□□□ 0.93
ABCA1-203ENST00000423487 ONECUT3O60422 494 aaPredicted RBP20.83■□□□□ 0.92
ABCA1-203ENST00000423487 MPRIPQ6WCQ1 1025 aa20.83■□□□□ 0.92
ABCA1-203ENST00000423487 IL17REQ8NFR9 667 aa20.83■□□□□ 0.92
ABCA1-203ENST00000423487 DCAF5Q96JK2 942 aa20.83■□□□□ 0.92
ABCA1-203ENST00000423487 THUMPD2Q9BTF0 503 aaKnown RBP20.83■□□□□ 0.92
ABCA1-203ENST00000423487 E9PSI1 815 aa20.82■□□□□ 0.92
ABCA1-203ENST00000423487 RNMTO43148 476 aaKnown RBP20.82■□□□□ 0.92
ABCA1-203ENST00000423487 RBM6P78332 1123 aaKnown RBP20.82■□□□□ 0.92
ABCA1-203ENST00000423487 NKX1-1Q15270 411 aaPredicted RBP20.82■□□□□ 0.92
ABCA1-203ENST00000423487 CEMIPQ8WUJ3 1361 aa20.81■□□□□ 0.92
ABCA1-203ENST00000423487 CDCA7LQ96GN5 454 aa20.8■□□□□ 0.92
ABCA1-203ENST00000423487 LGR6Q9HBX8 967 aa20.8■□□□□ 0.92
ABCA1-203ENST00000423487 LRRC37A3O60309 1634 aa20.79■□□□□ 0.92
ABCA1-203ENST00000423487 SLFN5Q08AF3 891 aa20.79■□□□□ 0.92
ABCA1-203ENST00000423487 IFT57Q9NWB7 429 aa20.79■□□□□ 0.92
ABCA1-203ENST00000423487 THSD7AQ9UPZ6 1657 aa20.79■□□□□ 0.92
ABCA1-203ENST00000423487 CENPBP07199 599 aaPredicted RBP20.78■□□□□ 0.92
ABCA1-203ENST00000423487 GNAI1P63096 354 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 TEFQ10587 303 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 MYH16Q9H6N6 1097 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 SHANK3Q9BYB0 1731 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 SEPT12Q8IYM1 358 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 CFAP44Q96MT7 982 aa20.78■□□□□ 0.92
ABCA1-203ENST00000423487 SPINK5Q9NQ38 1064 aaPredicted RBP20.78■□□□□ 0.92
ABCA1-203ENST00000423487 RGS17Q9UGC6 210 aaPredicted RBP20.78■□□□□ 0.92
ABCA1-203ENST00000423487 KDM6AO15550 1401 aaPredicted RBP20.77■□□□□ 0.92
ABCA1-203ENST00000423487 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.92
ABCA1-203ENST00000423487 RXRBP28702 533 aa20.76■□□□□ 0.91
ABCA1-203ENST00000423487 ADAMTS7Q9UKP4 1686 aa20.75■□□□□ 0.91
ABCA1-203ENST00000423487 ERVV-2B6SEH9 535 aa20.75■□□□□ 0.91
ABCA1-203ENST00000423487 ZNF853P0CG23 659 aa20.75■□□□□ 0.91
ABCA1-203ENST00000423487 TAF7Q15545 349 aaPredicted RBP20.75■□□□□ 0.91
ABCA1-203ENST00000423487 TRMT2AQ8IZ69 625 aaKnown RBP20.75■□□□□ 0.91
ABCA1-203ENST00000423487 MARCH10Q8NA82 808 aaPredicted RBP20.75■□□□□ 0.91
ABCA1-203ENST00000423487 BABAM1Q9NWV8 329 aa20.75■□□□□ 0.91
ABCA1-203ENST00000423487 DUSP27Q5VZP5 1158 aa20.74■□□□□ 0.91
ABCA1-203ENST00000423487 SLC52A2Q9HAB3 445 aa20.74■□□□□ 0.91
ABCA1-203ENST00000423487 CHL1O00533 1208 aa20.73■□□□□ 0.91
ABCA1-203ENST00000423487 CABP4P57796 275 aa20.73■□□□□ 0.91
ABCA1-203ENST00000423487 SCN11AQ9UI33 1791 aa20.72■□□□□ 0.91
ABCA1-203ENST00000423487 POTEAQ6S8J7 498 aa20.72■□□□□ 0.91
ABCA1-203ENST00000423487 TSPYL4Q9UJ04 414 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms