RNA–Protein interactions for RNA: ENST00000422944.1

HCG20-207, Transcript of HLA complex group 20, humanhuman

TSL 2

Gene HCG20, Length 1,176 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCG20-207ENST00000422944 PLEKHF1Q96S99 279 aa13.17□□□□□ -0.3
HCG20-207ENST00000422944 GJD4Q96KN9 370 aaPredicted RBP13.16□□□□□ -0.3
HCG20-207ENST00000422944 QTRT2Q9H974 415 aaKnown RBP13.16□□□□□ -0.3
HCG20-207ENST00000422944 ATRNO75882 1429 aa13.15□□□□□ -0.3
HCG20-207ENST00000422944 HTATSF1O43719 755 aaKnown RBP13.15□□□□□ -0.3
HCG20-207ENST00000422944 AEBP1Q8IUX7 1158 aa13.15□□□□□ -0.3
HCG20-207ENST00000422944 USHBP1Q8N6Y0 703 aa13.15□□□□□ -0.3
HCG20-207ENST00000422944 EXOC5O00471 708 aa13.14□□□□□ -0.31
HCG20-207ENST00000422944 HSP90AB1P08238 724 aaKnown RBP13.14□□□□□ -0.31
HCG20-207ENST00000422944 ZCRB1Q8TBF4 217 aaKnown RBP13.14□□□□□ -0.31
HCG20-207ENST00000422944 USP35Q9P2H5 1018 aa13.14□□□□□ -0.31
HCG20-207ENST00000422944 RBM6P78332 1123 aaKnown RBP13.13□□□□□ -0.31
HCG20-207ENST00000422944 NFE2L2Q16236 605 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 CCDC27Q2M243 656 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 C1orf141Q5JVX7 400 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 PARP4Q9UKK3 1724 aaKnown RBP13.13□□□□□ -0.31
HCG20-207ENST00000422944 OVOS2A0A0G2JMS6 1433 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 PCDH11XQ9BZA7 1347 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 PCDH11YQ9BZA8 1340 aa13.13□□□□□ -0.31
HCG20-207ENST00000422944 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
HCG20-207ENST00000422944 APAF1O14727 1248 aa13.12□□□□□ -0.31
HCG20-207ENST00000422944 ONECUT3O60422 494 aaPredicted RBP13.12□□□□□ -0.31
HCG20-207ENST00000422944 TMPOP42166 694 aaKnown RBP13.12□□□□□ -0.31
HCG20-207ENST00000422944 CALD1Q05682 793 aaKnown RBP13.12□□□□□ -0.31
HCG20-207ENST00000422944 AKAP4Q5JQC9 854 aa13.12□□□□□ -0.31
HCG20-207ENST00000422944 CCDC146Q8IYE0 955 aa13.12□□□□□ -0.31
HCG20-207ENST00000422944 IFNL2Q8IZJ0 200 aa13.12□□□□□ -0.31
HCG20-207ENST00000422944 RTF1Q92541 710 aaKnown RBP13.12□□□□□ -0.31
HCG20-207ENST00000422944 RIPK4P57078 832 aa13.11□□□□□ -0.31
HCG20-207ENST00000422944 DDB1Q16531 1140 aa13.11□□□□□ -0.31
HCG20-207ENST00000422944 DISP2A7MBM2 1401 aa13.11□□□□□ -0.31
HCG20-207ENST00000422944 GNAT3A8MTJ3 354 aa13.1□□□□□ -0.31
HCG20-207ENST00000422944 RXRBP28702 533 aa13.1□□□□□ -0.31
HCG20-207ENST00000422944 HNRNPUQ00839 825 aaKnown RBP eCLIP13.1□□□□□ -0.31
HCG20-207ENST00000422944 MTHFSDQ2M296 383 aaKnown RBP13.1□□□□□ -0.31
HCG20-207ENST00000422944 ZNF530Q6P9A1 599 aaPredicted RBP13.1□□□□□ -0.31
HCG20-207ENST00000422944 PHACTR3Q96KR7 559 aa13.1□□□□□ -0.31
HCG20-207ENST00000422944 MEGF6O75095 1541 aa13.09□□□□□ -0.31
HCG20-207ENST00000422944 FAM98CQ17RN3 349 aaKnown RBP13.09□□□□□ -0.31
HCG20-207ENST00000422944 TNS2Q63HR2 1409 aa13.08□□□□□ -0.32
HCG20-207ENST00000422944 A0A0G2JS52 829 aa13.08□□□□□ -0.32
HCG20-207ENST00000422944 MYT1Q01538 1121 aa13.08□□□□□ -0.32
HCG20-207ENST00000422944 PDE3BQ13370 1112 aa13.08□□□□□ -0.32
HCG20-207ENST00000422944 MAP3K5Q99683 1374 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 PHKG2P15735 406 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 WDR63Q8IWG1 891 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 DCAF5Q96JK2 942 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 PKD1L3Q7Z443 1732 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 ZBED9Q6R2W3 1325 aa13.07□□□□□ -0.32
HCG20-207ENST00000422944 WNK3Q9BYP7 1800 aa13.06□□□□□ -0.32
HCG20-207ENST00000422944 NKX1-1Q15270 411 aaPredicted RBP13.06□□□□□ -0.32
HCG20-207ENST00000422944 NEUROD2Q15784 382 aa13.06□□□□□ -0.32
HCG20-207ENST00000422944 GLI3P10071 1580 aa13.06□□□□□ -0.32
HCG20-207ENST00000422944 WWC1Q8IX03 1113 aa13.05□□□□□ -0.32
HCG20-207ENST00000422944 SEPT12Q8IYM1 358 aa13.05□□□□□ -0.32
HCG20-207ENST00000422944 DDX54Q8TDD1 881 aaKnown RBP13.05□□□□□ -0.32
HCG20-207ENST00000422944 BABAM1Q9NWV8 329 aa13.05□□□□□ -0.32
HCG20-207ENST00000422944 IL16Q14005 1332 aa13.05□□□□□ -0.32
HCG20-207ENST00000422944 ERVV-2B6SEH9 535 aa13.04□□□□□ -0.32
HCG20-207ENST00000422944 CYP27B1O15528 508 aa13.04□□□□□ -0.32
HCG20-207ENST00000422944 TEFQ10587 303 aa13.04□□□□□ -0.32
HCG20-207ENST00000422944 RRP7AQ9Y3A4 280 aaKnown RBP13.04□□□□□ -0.32
HCG20-207ENST00000422944 THSD7AQ9UPZ6 1657 aa13.03□□□□□ -0.32
HCG20-207ENST00000422944 GOLGA2Q08379 1002 aa13.03□□□□□ -0.32
HCG20-207ENST00000422944 TRIM35Q9UPQ4 493 aa13.03□□□□□ -0.32
HCG20-207ENST00000422944 RNMTO43148 476 aaKnown RBP13.02□□□□□ -0.33
HCG20-207ENST00000422944 GNAI1P63096 354 aa13.02□□□□□ -0.33
HCG20-207ENST00000422944 RGS17Q9UGC6 210 aaPredicted RBP13.02□□□□□ -0.33
HCG20-207ENST00000422944 CEMIPQ8WUJ3 1361 aa13.02□□□□□ -0.33
HCG20-207ENST00000422944 BCL9O00512 1426 aa13.02□□□□□ -0.33
HCG20-207ENST00000422944 E9PSI1 815 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 MPRIPQ6WCQ1 1025 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 KRT27Q7Z3Y8 459 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 YTHDC1Q96MU7 727 aaKnown RBP13.01□□□□□ -0.33
HCG20-207ENST00000422944 MYH16Q9H6N6 1097 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 IFT57Q9NWB7 429 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 SALL2Q9Y467 1007 aaPredicted RBP13.01□□□□□ -0.33
HCG20-207ENST00000422944 ZNF521Q96K83 1311 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 LRRC37A3O60309 1634 aa13.01□□□□□ -0.33
HCG20-207ENST00000422944 DLG5Q8TDM6 1919 aa13□□□□□ -0.33
HCG20-207ENST00000422944 CABP4P57796 275 aa13□□□□□ -0.33
HCG20-207ENST00000422944 TAF7Q15545 349 aaPredicted RBP13□□□□□ -0.33
HCG20-207ENST00000422944 POTEAQ6S8J7 498 aa13□□□□□ -0.33
HCG20-207ENST00000422944 FAM196AQ6ZSG2 479 aa13□□□□□ -0.33
HCG20-207ENST00000422944 IL17REQ8NFR9 667 aa13□□□□□ -0.33
HCG20-207ENST00000422944 CFAP44Q96MT7 982 aa13□□□□□ -0.33
HCG20-207ENST00000422944 CHMP4AQ9BY43 222 aa13□□□□□ -0.33
HCG20-207ENST00000422944 HMGB2P26583 209 aaKnown RBP12.99□□□□□ -0.33
HCG20-207ENST00000422944 MCM10Q7L590 875 aa12.99□□□□□ -0.33
HCG20-207ENST00000422944 MARCH10Q8NA82 808 aaPredicted RBP12.99□□□□□ -0.33
HCG20-207ENST00000422944 SLC52A2Q9HAB3 445 aa12.99□□□□□ -0.33
HCG20-207ENST00000422944 TMOD3Q9NYL9 352 aa12.98□□□□□ -0.33
HCG20-207ENST00000422944 SHANK3Q9BYB0 1731 aa12.97□□□□□ -0.33
HCG20-207ENST00000422944 ADAMTS7Q9UKP4 1686 aa12.97□□□□□ -0.33
HCG20-207ENST00000422944 LGR6Q9HBX8 967 aa12.97□□□□□ -0.33
HCG20-207ENST00000422944 SCN11AQ9UI33 1791 aa12.97□□□□□ -0.33
HCG20-207ENST00000422944 BTBD11A6QL63 1104 aa12.96□□□□□ -0.33
HCG20-207ENST00000422944 CHL1O00533 1208 aa12.96□□□□□ -0.33
HCG20-207ENST00000422944 DCTN1Q14203 1278 aa12.96□□□□□ -0.33
HCG20-207ENST00000422944 MRC1P22897 1456 aa12.96□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms