RNA–Protein interactions for RNA: ENST00000422748.5

CALD1-205, Transcript of caldesmon 1, humanhuman

TSL 2 BASIC

Gene CALD1, Length 2,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-205ENST00000422748 ADGRB2O60241 1585 aa16.05■□□□□ 0.16
CALD1-205ENST00000422748 NEURL4Q96JN8 1562 aa16.04■□□□□ 0.16
CALD1-205ENST00000422748 IRX5P78411 483 aaPredicted RBP16.04■□□□□ 0.16
CALD1-205ENST00000422748 SYAP1Q96A49 352 aaPredicted RBP16.04■□□□□ 0.16
CALD1-205ENST00000422748 CFAP53Q96M91 514 aa16.04■□□□□ 0.16
CALD1-205ENST00000422748 ABCC11Q96J66 1382 aa16.03■□□□□ 0.16
CALD1-205ENST00000422748 CTIFO43310 598 aaKnown RBP16.03■□□□□ 0.16
CALD1-205ENST00000422748 CHAF1AQ13111 956 aaPredicted RBP16.03■□□□□ 0.16
CALD1-205ENST00000422748 UVSSAQ2YD98 709 aa16.03■□□□□ 0.16
CALD1-205ENST00000422748 YEATS2Q9ULM3 1422 aa16.03■□□□□ 0.16
CALD1-205ENST00000422748 KCNJ4P48050 445 aa16.02■□□□□ 0.16
CALD1-205ENST00000422748 GABPB1Q06547 395 aaPredicted RBP16.02■□□□□ 0.16
CALD1-205ENST00000422748 ZBTB7BO15156 539 aaPredicted RBP16.02■□□□□ 0.15
CALD1-205ENST00000422748 HMGB1P09429 215 aaKnown RBP16.02■□□□□ 0.15
CALD1-205ENST00000422748 SIRT2Q8IXJ6 389 aa16.02■□□□□ 0.15
CALD1-205ENST00000422748 FAM184AQ8NB25 1140 aa16.02■□□□□ 0.15
CALD1-205ENST00000422748 REREQ9P2R6 1566 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 SLFN14P0C7P3 912 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 KIAA1524Q8TCG1 905 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 PYCARDQ9ULZ3 195 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 TRIM35Q9UPQ4 493 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 ABCC3O15438 1527 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 MED14O60244 1454 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 GADD45BO75293 160 aaPredicted RBP16.01■□□□□ 0.15
CALD1-205ENST00000422748 PHF14O94880 888 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 UGGT1Q9NYU2 1555 aa16.01■□□□□ 0.15
CALD1-205ENST00000422748 TSPOAP1O95153 1857 aa16■□□□□ 0.15
CALD1-205ENST00000422748 BRD1O95696 1058 aa16■□□□□ 0.15
CALD1-205ENST00000422748 PLEKHM2Q8IWE5 1019 aa16■□□□□ 0.15
CALD1-205ENST00000422748 NPATQ14207 1427 aa16■□□□□ 0.15
CALD1-205ENST00000422748 NCBP1Q09161 790 aaKnown RBP16■□□□□ 0.15
CALD1-205ENST00000422748 MAPK8IP2Q13387 824 aaPredicted RBP16■□□□□ 0.15
CALD1-205ENST00000422748 KIF13AQ9H1H9 1805 aa15.99■□□□□ 0.15
CALD1-205ENST00000422748 KCNF1Q9H3M0 494 aa15.99■□□□□ 0.15
CALD1-205ENST00000422748 GDPD2Q9HCC8 539 aa15.99■□□□□ 0.15
CALD1-205ENST00000422748 CTNNA3Q9UI47 895 aa15.99■□□□□ 0.15
CALD1-205ENST00000422748 TMPOP42166 694 aaKnown RBP15.99■□□□□ 0.15
CALD1-205ENST00000422748 FOXD4L6Q3SYB3 417 aaPredicted RBP15.99■□□□□ 0.15
CALD1-205ENST00000422748 TTC22Q5TAA0 569 aa15.99■□□□□ 0.15
CALD1-205ENST00000422748 INTS3Q68E01 1043 aaKnown RBP15.99■□□□□ 0.15
CALD1-205ENST00000422748 FOXD4L3Q6VB84 417 aaPredicted RBP15.99■□□□□ 0.15
CALD1-205ENST00000422748 ANKRD36BQ8N2N9 1353 aa15.98■□□□□ 0.15
CALD1-205ENST00000422748 HCLS1P14317 486 aaPredicted RBP15.98■□□□□ 0.15
CALD1-205ENST00000422748 CFAP70Q5T0N1 1121 aa15.98■□□□□ 0.15
CALD1-205ENST00000422748 GGT6Q6P531 493 aa15.98■□□□□ 0.15
CALD1-205ENST00000422748 SMARCA5O60264 1052 aaPredicted RBP15.97■□□□□ 0.15
CALD1-205ENST00000422748 SLC12A5Q9H2X9 1139 aa15.97■□□□□ 0.15
CALD1-205ENST00000422748 ALDH1L2Q3SY69 923 aa15.96■□□□□ 0.15
CALD1-205ENST00000422748 TMX3Q96JJ7 454 aa15.96■□□□□ 0.15
CALD1-205ENST00000422748 DDX41Q9UJV9 622 aaKnown RBP15.96■□□□□ 0.15
CALD1-205ENST00000422748 KDM4AO75164 1064 aa15.96■□□□□ 0.15
CALD1-205ENST00000422748 C16orf71Q8IYS4 520 aaPredicted RBP15.96■□□□□ 0.15
CALD1-205ENST00000422748 CAMSAP1Q5T5Y3 1602 aa15.95■□□□□ 0.14
CALD1-205ENST00000422748 PLEKHF1Q96S99 279 aa15.95■□□□□ 0.14
CALD1-205ENST00000422748 KIAA1210Q9ULL0 1709 aa15.95■□□□□ 0.14
CALD1-205ENST00000422748 CCDC66A2RUB6 948 aa15.95■□□□□ 0.14
CALD1-205ENST00000422748 USP48Q86UV5 1035 aa15.95■□□□□ 0.14
CALD1-205ENST00000422748 ZFP91Q96JP5 570 aaPredicted RBP15.95■□□□□ 0.14
CALD1-205ENST00000422748 KIF1BO60333 1816 aa15.94■□□□□ 0.14
CALD1-205ENST00000422748 IL16Q14005 1332 aa15.94■□□□□ 0.14
CALD1-205ENST00000422748 SIGLEC1Q9BZZ2 1709 aa15.94■□□□□ 0.14
CALD1-205ENST00000422748 TERF2Q15554 542 aa15.94■□□□□ 0.14
CALD1-205ENST00000422748 MROH2AA6NES4 1674 aa15.94■□□□□ 0.14
CALD1-205ENST00000422748 IFT172Q9UG01 1749 aa15.93■□□□□ 0.14
CALD1-205ENST00000422748 U2SURPO15042 1029 aaKnown RBP15.93■□□□□ 0.14
CALD1-205ENST00000422748 AP5Z1O43299 807 aa15.93■□□□□ 0.14
CALD1-205ENST00000422748 NAA30Q147X3 362 aaPredicted RBP15.93■□□□□ 0.14
CALD1-205ENST00000422748 CCDC183Q5T5S1 534 aa15.93■□□□□ 0.14
CALD1-205ENST00000422748 SPC24Q8NBT2 197 aa15.93■□□□□ 0.14
CALD1-205ENST00000422748 TIGD1Q96MW7 591 aa15.93■□□□□ 0.14
CALD1-205ENST00000422748 MORC2Q9Y6X9 1032 aaPredicted RBP15.93■□□□□ 0.14
CALD1-205ENST00000422748 SDSP20132 328 aa15.92■□□□□ 0.14
CALD1-205ENST00000422748 NEK4P51957 841 aa15.92■□□□□ 0.14
CALD1-205ENST00000422748 ADGRB3O60242 1522 aa15.92■□□□□ 0.14
CALD1-205ENST00000422748 ZC3H13Q5T200 1668 aaKnown RBP15.92■□□□□ 0.14
CALD1-205ENST00000422748 SYCP1Q15431 976 aa15.92■□□□□ 0.14
CALD1-205ENST00000422748 OTUD7AQ8TE49 926 aaPredicted RBP15.92■□□□□ 0.14
CALD1-205ENST00000422748 DNAJC2Q99543 621 aaKnown RBP15.91■□□□□ 0.14
CALD1-205ENST00000422748 MYOM2P54296 1465 aa15.91■□□□□ 0.14
CALD1-205ENST00000422748 CFAP65Q6ZU64 1925 aaKnown RBP15.91■□□□□ 0.14
CALD1-205ENST00000422748 SLC20A2Q08357 652 aa15.91■□□□□ 0.14
CALD1-205ENST00000422748 CASC1Q6TDU7 716 aa15.91■□□□□ 0.14
CALD1-205ENST00000422748 KIF18AQ8NI77 898 aa15.91■□□□□ 0.14
CALD1-205ENST00000422748 NOL8Q76FK4 1167 aaKnown RBP15.91■□□□□ 0.14
CALD1-205ENST00000422748 REC8O95072 547 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 PUS7Q96PZ0 661 aaKnown RBP15.9■□□□□ 0.14
CALD1-205ENST00000422748 PIK3R4Q99570 1358 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 TPM3P06753 285 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 MX1P20591 662 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 CUL4AQ13619 759 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 NRXN1Q9ULB1 1477 aa15.9■□□□□ 0.14
CALD1-205ENST00000422748 PIK3C2BO00750 1634 aa15.89■□□□□ 0.13
CALD1-205ENST00000422748 TCHHQ07283 1943 aa15.89■□□□□ 0.13
CALD1-205ENST00000422748 ERICH4A6NGS2 130 aa15.89■□□□□ 0.13
CALD1-205ENST00000422748 CAPN2P17655 700 aa15.89■□□□□ 0.13
CALD1-205ENST00000422748 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.89■□□□□ 0.13
CALD1-205ENST00000422748 BRPF1P55201 1214 aaPredicted RBP15.89■□□□□ 0.13
CALD1-205ENST00000422748 TICAM2Q86XR7 235 aa15.89■□□□□ 0.13
CALD1-205ENST00000422748 MRPL50Q8N5N7 158 aaKnown RBP15.89■□□□□ 0.13
CALD1-205ENST00000422748 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms