RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 CCDC102AQ96A19 550 aa15.89■□□□□ 0.13
COL20A1-203ENST00000422202 TNNT1P13805 278 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 ERLIN1O75477 346 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 CTNNA2P26232 953 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.88■□□□□ 0.13
COL20A1-203ENST00000422202 ZBED9Q6R2W3 1325 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 MCM2P49736 904 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 MKNK2Q9HBH9 465 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 TMEM132EQ6IEE7 984 aa15.88■□□□□ 0.13
COL20A1-203ENST00000422202 TRMT1LQ7Z2T5 733 aaKnown RBP15.88■□□□□ 0.13
COL20A1-203ENST00000422202 GIMAP7Q8NHV1 300 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 TRAK2O60296 914 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 HDGFL1Q5TGJ6 251 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 CCDC148Q8NFR7 591 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 SMC1AQ14683 1233 aaKnown RBP15.87■□□□□ 0.13
COL20A1-203ENST00000422202 HOOK3Q86VS8 718 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 SSX2IPQ9Y2D8 614 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 MTERF4Q7Z6M4 381 aaKnown RBP15.87■□□□□ 0.13
COL20A1-203ENST00000422202 ZNF219Q9P2Y4 722 aaPredicted RBP15.87■□□□□ 0.13
COL20A1-203ENST00000422202 LARP1Q6PKG0 1096 aaKnown RBP15.87■□□□□ 0.13
COL20A1-203ENST00000422202 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 AACSQ86V21 672 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 AEBP1Q8IUX7 1158 aa15.87■□□□□ 0.13
COL20A1-203ENST00000422202 ZNF354CQ86Y25 554 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.86■□□□□ 0.13
COL20A1-203ENST00000422202 IDH1O75874 414 aaKnown RBP15.86■□□□□ 0.13
COL20A1-203ENST00000422202 MAP3K9P80192 1104 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
COL20A1-203ENST00000422202 MINDY4BA8MYZ0 360 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 ZNF287Q9HBT7 754 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 MBD3O95983 291 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 WIZO95785 1651 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 CCDC96Q2M329 555 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 GIGYF2Q6Y7W6 1299 aaKnown RBP15.86■□□□□ 0.13
COL20A1-203ENST00000422202 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 CNTLNQ9NXG0 1405 aa15.86■□□□□ 0.13
COL20A1-203ENST00000422202 SLC4A2P04920 1241 aa15.85■□□□□ 0.13
COL20A1-203ENST00000422202 NOB1Q9ULX3 412 aaKnown RBP15.85■□□□□ 0.13
COL20A1-203ENST00000422202 TSG101Q99816 390 aa15.85■□□□□ 0.13
COL20A1-203ENST00000422202 CUL5Q93034 780 aa15.85■□□□□ 0.13
COL20A1-203ENST00000422202 SERPINA10Q9UK55 444 aa15.85■□□□□ 0.13
COL20A1-203ENST00000422202 VTI1AQ96AJ9 217 aa15.85■□□□□ 0.13
COL20A1-203ENST00000422202 DNA2P51530 1060 aa15.84■□□□□ 0.13
COL20A1-203ENST00000422202 CWC27Q6UX04 472 aaKnown RBP15.84■□□□□ 0.13
COL20A1-203ENST00000422202 CACNA2D4Q7Z3S7 1137 aa15.84■□□□□ 0.13
COL20A1-203ENST00000422202 TXNDC2Q86VQ3 553 aa15.84■□□□□ 0.13
COL20A1-203ENST00000422202 LMAN1P49257 510 aa15.84■□□□□ 0.13
COL20A1-203ENST00000422202 MRE11P49959 708 aa15.84■□□□□ 0.13
COL20A1-203ENST00000422202 KRT85P78386 507 aa15.83■□□□□ 0.13
COL20A1-203ENST00000422202 IFFO1Q0D2I5 559 aa15.83■□□□□ 0.13
COL20A1-203ENST00000422202 SPA17Q15506 151 aa15.83■□□□□ 0.13
COL20A1-203ENST00000422202 AIDAQ96BJ3 306 aa15.83■□□□□ 0.13
COL20A1-203ENST00000422202 ZNF652Q9Y2D9 606 aa15.83■□□□□ 0.13
COL20A1-203ENST00000422202 ARHGAP5Q13017 1502 aa15.83■□□□□ 0.12
COL20A1-203ENST00000422202 ERICH4A6NGS2 130 aa15.83■□□□□ 0.12
COL20A1-203ENST00000422202 FEZ1Q99689 392 aa15.83■□□□□ 0.12
COL20A1-203ENST00000422202 SPATA32Q96LK8 384 aa15.83■□□□□ 0.12
COL20A1-203ENST00000422202 ADAMTS2O95450 1211 aa15.83■□□□□ 0.12
COL20A1-203ENST00000422202 ARL1P40616 181 aaPredicted RBP15.83■□□□□ 0.12
COL20A1-203ENST00000422202 DZIP1Q86YF9 867 aaKnown RBP15.83■□□□□ 0.12
COL20A1-203ENST00000422202 CAVIN4Q5BKX8 364 aa15.82■□□□□ 0.12
COL20A1-203ENST00000422202 PUF60Q9UHX1 559 aaKnown RBP15.82■□□□□ 0.12
COL20A1-203ENST00000422202 WASF1Q92558 559 aa15.82■□□□□ 0.12
COL20A1-203ENST00000422202 FERP16591 822 aa15.82■□□□□ 0.12
COL20A1-203ENST00000422202 TWISTNBQ3B726 338 aaPredicted RBP15.82■□□□□ 0.12
COL20A1-203ENST00000422202 TICAM2Q86XR7 235 aa15.82■□□□□ 0.12
COL20A1-203ENST00000422202 KLHL10Q6JEL2 608 aa15.82■□□□□ 0.12
COL20A1-203ENST00000422202 CLEC11AQ9Y240 323 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 TMCO5BA8MYB1 307 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 ZWINTO95229 277 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 RPGRQ92834 1020 aaKnown RBP15.81■□□□□ 0.12
COL20A1-203ENST00000422202 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 METTL24Q5JXM2 366 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 CASQ1P31415 396 aa15.81■□□□□ 0.12
COL20A1-203ENST00000422202 STARD3NLO95772 234 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 PRKAR2BP31323 418 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 BLOC1S2Q6QNY1 142 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 PODXL2Q9NZ53 605 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 IMMTQ16891 758 aaKnown RBP15.8■□□□□ 0.12
COL20A1-203ENST00000422202 RGS22Q8NE09 1264 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 SMTNL1A8MU46 457 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 RRBP1Q9P2E9 1410 aaKnown RBP15.8■□□□□ 0.12
COL20A1-203ENST00000422202 CFAP100Q494V2 611 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 ARHGAP29Q52LW3 1261 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 FKBP15Q5T1M5 1219 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 ZNF530Q6P9A1 599 aaPredicted RBP15.8■□□□□ 0.12
COL20A1-203ENST00000422202 GCOM1H8Y6P7 765 aaPredicted RBP15.8■□□□□ 0.12
COL20A1-203ENST00000422202 MYZAPP0CAP1 466 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 UPF3BQ9BZI7 483 aaKnown RBP15.8■□□□□ 0.12
COL20A1-203ENST00000422202 CTNNA3Q9UI47 895 aa15.8■□□□□ 0.12
COL20A1-203ENST00000422202 TMCO3Q6UWJ1 677 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 EHMT1Q9H9B1 1298 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 XPCQ01831 940 aaPredicted RBP15.79■□□□□ 0.12
COL20A1-203ENST00000422202 VPS36Q86VN1 386 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 PTPRGP23470 1445 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 CCT4P50991 539 aaKnown RBP15.79■□□□□ 0.12
COL20A1-203ENST00000422202 TSNARE1Q96NA8 513 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 CRACR2AQ9BSW2 395 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 PDRG1Q9NUG6 133 aa15.79■□□□□ 0.12
COL20A1-203ENST00000422202 SAMM50Q9Y512 469 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms