RNA–Protein interactions for RNA: ENST00000421999.7

CMSS1-201, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMSS1, Length 4,330 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-201ENST00000421999 RSPH6AQ9H0K4 717 aa12.02□□□□□ -0.49
CMSS1-201ENST00000421999 PIK3C2BO00750 1634 aa12.02□□□□□ -0.49
CMSS1-201ENST00000421999 GNL2Q13823 731 aaKnown RBP12.02□□□□□ -0.49
CMSS1-201ENST00000421999 C20orf194Q5TEA3 1177 aa12.02□□□□□ -0.49
CMSS1-201ENST00000421999 TMOD3Q9NYL9 352 aa12.02□□□□□ -0.49
CMSS1-201ENST00000421999 VWDEQ8N2E2 1590 aa12.01□□□□□ -0.49
CMSS1-201ENST00000421999 PTPRMP28827 1452 aa12.01□□□□□ -0.49
CMSS1-201ENST00000421999 NEXMIFQ5QGS0 1516 aa12.01□□□□□ -0.49
CMSS1-201ENST00000421999 BICDL1Q6ZP65 573 aa12.01□□□□□ -0.49
CMSS1-201ENST00000421999 NOL10Q9BSC4 688 aaKnown RBP12□□□□□ -0.49
CMSS1-201ENST00000421999 SBNO1A3KN83 1393 aa12□□□□□ -0.49
CMSS1-201ENST00000421999 BCORL1Q5H9F3 1711 aa12□□□□□ -0.49
CMSS1-201ENST00000421999 GOLGA6L4A6NEF3 574 aa12□□□□□ -0.49
CMSS1-201ENST00000421999 CDK11BP21127 795 aaKnown RBP12□□□□□ -0.49
CMSS1-201ENST00000421999 BTG4Q9NY30 223 aa12□□□□□ -0.49
CMSS1-201ENST00000421999 NKTRP30414 1462 aaKnown RBP12□□□□□ -0.49
CMSS1-201ENST00000421999 ZC3H13Q5T200 1668 aaKnown RBP11.99□□□□□ -0.49
CMSS1-201ENST00000421999 NOL8Q76FK4 1167 aaKnown RBP11.99□□□□□ -0.49
CMSS1-201ENST00000421999 PREX1Q8TCU6 1659 aa11.99□□□□□ -0.49
CMSS1-201ENST00000421999 SPINK5Q9NQ38 1064 aaPredicted RBP11.99□□□□□ -0.49
CMSS1-201ENST00000421999 LNPKQ9C0E8 428 aa11.99□□□□□ -0.49
CMSS1-201ENST00000421999 DEPDC5O75140 1603 aa11.99□□□□□ -0.49
CMSS1-201ENST00000421999 MROH1Q8NDA8 1641 aa11.99□□□□□ -0.49
CMSS1-201ENST00000421999 NBPF6Q5VWK0 638 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 ZCRB1Q8TBF4 217 aaKnown RBP11.98□□□□□ -0.49
CMSS1-201ENST00000421999 NBPF4Q96M43 638 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 USP6P35125 1406 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 APPP05067 770 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 HSP90B1P14625 803 aaKnown RBP11.98□□□□□ -0.49
CMSS1-201ENST00000421999 STARD3NLO95772 234 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 ADAMTS13Q76LX8 1427 aa11.98□□□□□ -0.49
CMSS1-201ENST00000421999 RAD21O60216 631 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 MVPQ14764 893 aaKnown RBP11.97□□□□□ -0.49
CMSS1-201ENST00000421999 CCDC27Q2M243 656 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 TMEM57Q8N5G2 664 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 DIAPH3Q9NSV4 1193 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 RBM19Q9Y4C8 960 aaKnown RBP11.97□□□□□ -0.49
CMSS1-201ENST00000421999 ATP7BP35670 1465 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 GNAI3P08754 354 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 SLC39A6Q13433 755 aa11.97□□□□□ -0.49
CMSS1-201ENST00000421999 F6X3S4 739 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 SURF6O75683 361 aaKnown RBP11.96□□□□□ -0.49
CMSS1-201ENST00000421999 KRT24Q2M2I5 525 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 LRRFIP1Q32MZ4 808 aaKnown RBP11.96□□□□□ -0.49
CMSS1-201ENST00000421999 RIMS1Q86UR5 1692 aaKnown RBP11.96□□□□□ -0.49
CMSS1-201ENST00000421999 IL16Q14005 1332 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 SPATA31D1Q6ZQQ2 1576 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 HSP90AB4PQ58FF6 505 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 C8orf58Q8NAV2 365 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 SRCIN1Q9C0H9 1055 aa11.96□□□□□ -0.49
CMSS1-201ENST00000421999 ANXA1P04083 346 aa11.96□□□□□ -0.5
CMSS1-201ENST00000421999 ANP32EQ9BTT0 268 aa11.96□□□□□ -0.5
CMSS1-201ENST00000421999 IL2RBP14784 551 aa11.95□□□□□ -0.5
CMSS1-201ENST00000421999 AKAP4Q5JQC9 854 aa11.95□□□□□ -0.5
CMSS1-201ENST00000421999 TRIM34Q9BYJ4 488 aa11.95□□□□□ -0.5
CMSS1-201ENST00000421999 ARHGEF10O15013 1369 aa11.95□□□□□ -0.5
CMSS1-201ENST00000421999 ALDH1L2Q3SY69 923 aa11.95□□□□□ -0.5
CMSS1-201ENST00000421999 CCT4P50991 539 aaKnown RBP11.95□□□□□ -0.5
CMSS1-201ENST00000421999 AAMPQ13685 434 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 TSPYL6Q8N831 410 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 NFATC2IPQ8NCF5 419 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 CCDC85AQ96PX6 553 aaPredicted RBP11.94□□□□□ -0.5
CMSS1-201ENST00000421999 SETBP1Q9Y6X0 1596 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 KDM4FA0A1W2PPD8 638 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 TRIM27P14373 513 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 BRINP3Q76B58 766 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 CNNM1Q9NRU3 951 aa11.94□□□□□ -0.5
CMSS1-201ENST00000421999 AMOTL1Q8IY63 956 aa11.93□□□□□ -0.5
CMSS1-201ENST00000421999 FMNL2Q96PY5 1086 aa11.93□□□□□ -0.5
CMSS1-201ENST00000421999 BCL11BQ9C0K0 894 aaPredicted RBP11.93□□□□□ -0.5
CMSS1-201ENST00000421999 TRIM35Q9UPQ4 493 aa11.93□□□□□ -0.5
CMSS1-201ENST00000421999 GNAI2P04899 355 aa11.93□□□□□ -0.5
CMSS1-201ENST00000421999 CLASRPQ8N2M8 674 aaKnown RBP11.93□□□□□ -0.5
CMSS1-201ENST00000421999 PLCB2Q00722 1185 aa11.93□□□□□ -0.5
CMSS1-201ENST00000421999 ADGRL3Q9HAR2 1447 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 DDB1Q16531 1140 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 TSHZ2Q9NRE2 1034 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 ACSBG1Q96GR2 724 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 SETD1BQ9UPS6 1966 aaKnown RBP11.92□□□□□ -0.5
CMSS1-201ENST00000421999 ZPR1O75312 459 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 ARHGEF25Q86VW2 580 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 MPHOSPH8Q99549 860 aa11.92□□□□□ -0.5
CMSS1-201ENST00000421999 DBF4Q9UBU7 674 aaPredicted RBP11.92□□□□□ -0.5
CMSS1-201ENST00000421999 PDE4AP27815 886 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 FLIIQ13045 1269 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 LGR6Q9HBX8 967 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 HTATSF1O43719 755 aaKnown RBP11.91□□□□□ -0.5
CMSS1-201ENST00000421999 WASHC4Q2M389 1173 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 SIL1Q9H173 461 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 TMEM131LA2VDJ0 1609 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 NRXN1Q9ULB1 1477 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 MAP3K5Q99683 1374 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 SLKQ9H2G2 1235 aaPredicted RBP11.91□□□□□ -0.5
CMSS1-201ENST00000421999 PTPRUQ92729 1446 aa11.91□□□□□ -0.5
CMSS1-201ENST00000421999 CEP170BQ9Y4F5 1589 aaPredicted RBP11.91□□□□□ -0.5
CMSS1-201ENST00000421999 AATKQ6ZMQ8 1374 aa11.9□□□□□ -0.5
CMSS1-201ENST00000421999 KIAA0232Q92628 1395 aa11.9□□□□□ -0.5
CMSS1-201ENST00000421999 TULP4Q9NRJ4 1543 aa11.9□□□□□ -0.5
CMSS1-201ENST00000421999 RUFY2Q8WXA3 655 aa11.9□□□□□ -0.5
CMSS1-201ENST00000421999 HMGB2P26583 209 aaKnown RBP11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms