RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
PMS1-208ENST00000421722 NSD3Q9BZ95 1437 aa9.55□□□□□ -0.88
PMS1-208ENST00000421722 MSH5O43196 834 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 DNAJC5GQ8N7S2 189 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 DDX54Q8TDD1 881 aaKnown RBP9.54□□□□□ -0.88
PMS1-208ENST00000421722 C5P01031 1676 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 USP47Q96K76 1375 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 SBNO2Q9Y2G9 1366 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 CGNL1Q0VF96 1302 aa9.54□□□□□ -0.88
PMS1-208ENST00000421722 EDC4Q6P2E9 1401 aaKnown RBP9.54□□□□□ -0.88
PMS1-208ENST00000421722 ZCRB1Q8TBF4 217 aaKnown RBP9.53□□□□□ -0.88
PMS1-208ENST00000421722 TOMM70O94826 608 aa9.53□□□□□ -0.88
PMS1-208ENST00000421722 HDGFL2Q7Z4V5 671 aaPredicted RBP9.53□□□□□ -0.88
PMS1-208ENST00000421722 PUS7Q96PZ0 661 aaKnown RBP9.53□□□□□ -0.88
PMS1-208ENST00000421722 IGSF1Q8N6C5 1336 aa9.52□□□□□ -0.88
PMS1-208ENST00000421722 CD163L1Q9NR16 1453 aa9.52□□□□□ -0.89
PMS1-208ENST00000421722 NME9Q86XW9 330 aa9.52□□□□□ -0.89
PMS1-208ENST00000421722 JMYQ8N9B5 988 aa9.52□□□□□ -0.89
PMS1-208ENST00000421722 RBM46Q8TBY0 533 aaKnown RBP9.52□□□□□ -0.89
PMS1-208ENST00000421722 SYTL4Q96C24 671 aaPredicted RBP9.52□□□□□ -0.89
PMS1-208ENST00000421722 TAF1LQ8IZX4 1826 aa9.51□□□□□ -0.89
PMS1-208ENST00000421722 WDR90Q96KV7 1748 aa9.51□□□□□ -0.89
PMS1-208ENST00000421722 MSL1Q68DK7 614 aa9.51□□□□□ -0.89
PMS1-208ENST00000421722 ZNF526Q8TF50 670 aaPredicted RBP9.51□□□□□ -0.89
PMS1-208ENST00000421722 SMARCC1Q92922 1105 aaPredicted RBP9.51□□□□□ -0.89
PMS1-208ENST00000421722 KCNQ4P56696 695 aa9.51□□□□□ -0.89
PMS1-208ENST00000421722 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.51□□□□□ -0.89
PMS1-208ENST00000421722 KAT6BQ8WYB5 2073 aa9.5□□□□□ -0.89
PMS1-208ENST00000421722 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
PMS1-208ENST00000421722 C10orf71Q711Q0 1435 aa9.5□□□□□ -0.89
PMS1-208ENST00000421722 C4BP0C0L5 1744 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 PRELPP51888 382 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 FSTL1Q12841 308 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 KLRG1Q96E93 195 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 KIF13BQ9NQT8 1826 aa9.49□□□□□ -0.89
PMS1-208ENST00000421722 MEGF6O75095 1541 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 SSFA2P28290 1259 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 AK7Q96M32 723 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 ROCK2O75116 1388 aaKnown RBP9.48□□□□□ -0.89
PMS1-208ENST00000421722 PALLDQ8WX93 1383 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 PLEKHG2Q9H7P9 1386 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 UBR3Q6ZT12 1888 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 TOGARAM1Q9Y4F4 1720 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 HOXC9P31274 260 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 TGFB2P61812 414 aa9.48□□□□□ -0.89
PMS1-208ENST00000421722 PIAS4Q8N2W9 510 aaPredicted RBP9.47□□□□□ -0.89
PMS1-208ENST00000421722 KIAA1551Q9HCM1 1747 aa9.47□□□□□ -0.89
PMS1-208ENST00000421722 TATP17735 454 aaPredicted RBP9.46□□□□□ -0.9
PMS1-208ENST00000421722 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.9
PMS1-208ENST00000421722 LTV1Q96GA3 475 aaPredicted RBP9.46□□□□□ -0.9
PMS1-208ENST00000421722 PCDH11XQ9BZA7 1347 aa9.46□□□□□ -0.9
PMS1-208ENST00000421722 PCDH11YQ9BZA8 1340 aa9.46□□□□□ -0.9
PMS1-208ENST00000421722 AMPHP49418 695 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 RAPGEF4Q8WZA2 1011 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 MAP3K19Q56UN5 1328 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 RGPD2P0DJD1 1756 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 PXDNLA1KZ92 1463 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 C16orf71Q8IYS4 520 aaPredicted RBP9.45□□□□□ -0.9
PMS1-208ENST00000421722 TNS4Q8IZW8 715 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 COG3Q96JB2 828 aa9.45□□□□□ -0.9
PMS1-208ENST00000421722 SMG6Q86US8 1419 aaKnown RBP9.45□□□□□ -0.9
PMS1-208ENST00000421722 A0A1W2PP64 1363 aa9.44□□□□□ -0.9
PMS1-208ENST00000421722 KIF24Q5T7B8 1368 aa9.44□□□□□ -0.9
PMS1-208ENST00000421722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.44□□□□□ -0.9
PMS1-208ENST00000421722 COL13A1Q5TAT6 717 aaPredicted RBP9.44□□□□□ -0.9
PMS1-208ENST00000421722 TMC1Q8TDI8 760 aa9.44□□□□□ -0.9
PMS1-208ENST00000421722 MAP2P11137 1827 aaKnown RBP9.44□□□□□ -0.9
PMS1-208ENST00000421722 ITGB4P16144 1822 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 NKX1-1Q15270 411 aaPredicted RBP9.43□□□□□ -0.9
PMS1-208ENST00000421722 SLC12A5Q9H2X9 1139 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 PKD1L3Q7Z443 1732 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 SLC24A1O60721 1099 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 NBPF6Q5VWK0 638 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 NBPF4Q96M43 638 aa9.43□□□□□ -0.9
PMS1-208ENST00000421722 TNRC6CQ9HCJ0 1690 aaKnown RBP9.42□□□□□ -0.9
PMS1-208ENST00000421722 KDM2BQ8NHM5 1336 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 NMRK2Q9NPI5 230 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 ARFGEF1Q9Y6D6 1849 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 ARHGAP27Q6ZUM4 889 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 NLGN1Q8N2Q7 840 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 CCDC87Q9NVE4 849 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 ZNF831Q5JPB2 1677 aa9.42□□□□□ -0.9
PMS1-208ENST00000421722 INSRP06213 1382 aa9.41□□□□□ -0.9
PMS1-208ENST00000421722 NCAPD2Q15021 1401 aa9.41□□□□□ -0.9
PMS1-208ENST00000421722 ZC3H4Q9UPT8 1303 aaKnown RBP9.41□□□□□ -0.9
PMS1-208ENST00000421722 MPRIPQ6WCQ1 1025 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 LINC00116Q8NCU8 138 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 SMC1BQ8NDV3 1235 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 BCS1LQ9Y276 419 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 C4AP0C0L4 1744 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 LOC102724428A0A0B4J2F2 783 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 PHF14O94880 888 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 MMP10P09238 476 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 SIK1P57059 783 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 C9orf131Q5VYM1 1079 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 AMIGO3Q86WK7 504 aa9.4□□□□□ -0.9
PMS1-208ENST00000421722 BRCA1P38398 1863 aaKnown RBP9.4□□□□□ -0.9
PMS1-208ENST00000421722 N4BP2Q86UW6 1770 aaPredicted RBP9.4□□□□□ -0.91
PMS1-208ENST00000421722 CYP27B1O15528 508 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 149.3 ms