RNA–Protein interactions for RNA: ENST00000421340.5

ABCF3-202, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 690 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-202ENST00000421340 WDR63Q8IWG1 891 aa28.28■■■□□ 2.12
ABCF3-202ENST00000421340 TRIM35Q9UPQ4 493 aa28.28■■■□□ 2.12
ABCF3-202ENST00000421340 SENP3-EIF4A1A0A087X0R7 540 aa28.27■■■□□ 2.12
ABCF3-202ENST00000421340 CENPBP07199 599 aaPredicted RBP28.27■■■□□ 2.12
ABCF3-202ENST00000421340 THRAP3Q9Y2W1 955 aaKnown RBP28.27■■■□□ 2.12
ABCF3-202ENST00000421340 BCL9LQ86UU0 1499 aa28.26■■■□□ 2.11
ABCF3-202ENST00000421340 NRAPQ86VF7 1730 aa28.25■■■□□ 2.11
ABCF3-202ENST00000421340 IL2RBP14784 551 aa28.24■■■□□ 2.11
ABCF3-202ENST00000421340 VPS72Q15906 364 aa28.24■■■□□ 2.11
ABCF3-202ENST00000421340 SPG7Q9UQ90 795 aa28.24■■■□□ 2.11
ABCF3-202ENST00000421340 SPATA31A1Q5TZJ5 1347 aa28.23■■■□□ 2.11
ABCF3-202ENST00000421340 GOLGA2Q08379 1002 aa28.23■■■□□ 2.11
ABCF3-202ENST00000421340 CDCA7Q9BWT1 371 aaPredicted RBP28.23■■■□□ 2.11
ABCF3-202ENST00000421340 SPATA31A5Q5VU36 1347 aa28.22■■■□□ 2.11
ABCF3-202ENST00000421340 SPATA31A7Q8IWB4 1347 aa28.22■■■□□ 2.11
ABCF3-202ENST00000421340 USP21Q9UK80 565 aa28.22■■■□□ 2.11
ABCF3-202ENST00000421340 IL16Q14005 1332 aa28.21■■■□□ 2.11
ABCF3-202ENST00000421340 OVOS2A0A0G2JMS6 1433 aa28.21■■■□□ 2.11
ABCF3-202ENST00000421340 CALD1Q05682 793 aaKnown RBP28.21■■■□□ 2.11
ABCF3-202ENST00000421340 MEGF6O75095 1541 aa28.21■■■□□ 2.11
ABCF3-202ENST00000421340 GNAT3A8MTJ3 354 aa28.2■■■□□ 2.1
ABCF3-202ENST00000421340 AKAP4Q5JQC9 854 aa28.2■■■□□ 2.1
ABCF3-202ENST00000421340 BARGINQ6ZT62 677 aa28.19■■■□□ 2.1
ABCF3-202ENST00000421340 ZNF530Q6P9A1 599 aaPredicted RBP28.18■■■□□ 2.1
ABCF3-202ENST00000421340 RTF1Q92541 710 aaKnown RBP28.18■■■□□ 2.1
ABCF3-202ENST00000421340 DISP2A7MBM2 1401 aa28.18■■■□□ 2.1
ABCF3-202ENST00000421340 MAP3K5Q99683 1374 aa28.17■■■□□ 2.1
ABCF3-202ENST00000421340 E9PSI1 815 aa28.17■■■□□ 2.1
ABCF3-202ENST00000421340 ZCRB1Q8TBF4 217 aaKnown RBP28.17■■■□□ 2.1
ABCF3-202ENST00000421340 USP35Q9P2H5 1018 aa28.17■■■□□ 2.1
ABCF3-202ENST00000421340 AFF2P51816 1311 aa28.17■■■□□ 2.1
ABCF3-202ENST00000421340 SLFN5Q08AF3 891 aa28.16■■■□□ 2.1
ABCF3-202ENST00000421340 C1orf141Q5JVX7 400 aa28.16■■■□□ 2.1
ABCF3-202ENST00000421340 TRMT2AQ8IZ69 625 aaKnown RBP28.16■■■□□ 2.1
ABCF3-202ENST00000421340 TNKS1BP1Q9C0C2 1729 aaKnown RBP28.15■■■□□ 2.1
ABCF3-202ENST00000421340 IFNL2Q8IZJ0 200 aa28.14■■■□□ 2.1
ABCF3-202ENST00000421340 PARP4Q9UKK3 1724 aaKnown RBP28.13■■■□□ 2.09
ABCF3-202ENST00000421340 CDCA7LQ96GN5 454 aa28.13■■■□□ 2.09
ABCF3-202ENST00000421340 TRPC5Q9UL62 973 aaPredicted RBP28.12■■■□□ 2.09
ABCF3-202ENST00000421340 CCDC9Q9Y3X0 531 aaKnown RBP28.12■■■□□ 2.09
ABCF3-202ENST00000421340 PCDH11XQ9BZA7 1347 aa28.12■■■□□ 2.09
ABCF3-202ENST00000421340 PCDH11YQ9BZA8 1340 aa28.12■■■□□ 2.09
ABCF3-202ENST00000421340 HSP90AB1P08238 724 aaKnown RBP28.11■■■□□ 2.09
ABCF3-202ENST00000421340 PHKG2P15735 406 aa28.11■■■□□ 2.09
ABCF3-202ENST00000421340 PKD1L3Q7Z443 1732 aa28.11■■■□□ 2.09
ABCF3-202ENST00000421340 IL17REQ8NFR9 667 aa28.1■■■□□ 2.09
ABCF3-202ENST00000421340 MYH16Q9H6N6 1097 aa28.1■■■□□ 2.09
ABCF3-202ENST00000421340 ATRNO75882 1429 aa28.09■■■□□ 2.09
ABCF3-202ENST00000421340 MCM10Q7L590 875 aa28.09■■■□□ 2.09
ABCF3-202ENST00000421340 SPINK5Q9NQ38 1064 aaPredicted RBP28.09■■■□□ 2.09
ABCF3-202ENST00000421340 IFT57Q9NWB7 429 aa28.09■■■□□ 2.09
ABCF3-202ENST00000421340 CEMIPQ8WUJ3 1361 aa28.09■■■□□ 2.09
ABCF3-202ENST00000421340 EXOC5O00471 708 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 CYP27B1O15528 508 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 ZNF853P0CG23 659 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 GNAI1P63096 354 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 DCTN1Q14203 1278 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 NKX1-1Q15270 411 aaPredicted RBP28.08■■■□□ 2.09
ABCF3-202ENST00000421340 DUSP27Q5VZP5 1158 aa28.08■■■□□ 2.09
ABCF3-202ENST00000421340 GJD4Q96KN9 370 aaPredicted RBP28.07■■■□□ 2.08
ABCF3-202ENST00000421340 CFAP44Q96MT7 982 aa28.07■■■□□ 2.08
ABCF3-202ENST00000421340 BABAM1Q9NWV8 329 aa28.07■■■□□ 2.08
ABCF3-202ENST00000421340 DLG5Q8TDM6 1919 aa28.07■■■□□ 2.08
ABCF3-202ENST00000421340 RNMTO43148 476 aaKnown RBP28.06■■■□□ 2.08
ABCF3-202ENST00000421340 DCAF5Q96JK2 942 aa28.06■■■□□ 2.08
ABCF3-202ENST00000421340 THUMPD2Q9BTF0 503 aaKnown RBP28.06■■■□□ 2.08
ABCF3-202ENST00000421340 ZNF772Q68DY9 489 aaPredicted RBP28.05■■■□□ 2.08
ABCF3-202ENST00000421340 ONECUT3O60422 494 aaPredicted RBP28.04■■■□□ 2.08
ABCF3-202ENST00000421340 QTRT2Q9H974 415 aaKnown RBP28.04■■■□□ 2.08
ABCF3-202ENST00000421340 CHL1O00533 1208 aa28.03■■■□□ 2.08
ABCF3-202ENST00000421340 MPRIPQ6WCQ1 1025 aa28.03■■■□□ 2.08
ABCF3-202ENST00000421340 LGR6Q9HBX8 967 aa28.03■■■□□ 2.08
ABCF3-202ENST00000421340 DDB1Q16531 1140 aa28.02■■■□□ 2.08
ABCF3-202ENST00000421340 TAF7Q15545 349 aaPredicted RBP28.01■■■□□ 2.07
ABCF3-202ENST00000421340 TNS2Q63HR2 1409 aa28.01■■■□□ 2.07
ABCF3-202ENST00000421340 ADAMTS7Q9UKP4 1686 aa28■■■□□ 2.07
ABCF3-202ENST00000421340 FAM98CQ17RN3 349 aaKnown RBP28■■■□□ 2.07
ABCF3-202ENST00000421340 DDX54Q8TDD1 881 aaKnown RBP28■■■□□ 2.07
ABCF3-202ENST00000421340 WNK3Q9BYP7 1800 aa27.99■■■□□ 2.07
ABCF3-202ENST00000421340 FANCIQ9NVI1 1328 aa27.98■■■□□ 2.07
ABCF3-202ENST00000421340 TEFQ10587 303 aa27.98■■■□□ 2.07
ABCF3-202ENST00000421340 LRRC37A3O60309 1634 aa27.98■■■□□ 2.07
ABCF3-202ENST00000421340 ERVV-2B6SEH9 535 aa27.97■■■□□ 2.07
ABCF3-202ENST00000421340 KDM6AO15550 1401 aaPredicted RBP27.97■■■□□ 2.07
ABCF3-202ENST00000421340 MBIPQ9NS73 344 aa27.96■■■□□ 2.07
ABCF3-202ENST00000421340 LAS1LQ9Y4W2 734 aaKnown RBP27.96■■■□□ 2.07
ABCF3-202ENST00000421340 GLI3P10071 1580 aa27.95■■■□□ 2.07
ABCF3-202ENST00000421340 CT47B1P0C2W7 299 aaPredicted RBP27.95■■■□□ 2.06
ABCF3-202ENST00000421340 SLC52A2Q9HAB3 445 aa27.94■■■□□ 2.06
ABCF3-202ENST00000421340 SHANK3Q9BYB0 1731 aa27.93■■■□□ 2.06
ABCF3-202ENST00000421340 TSR2Q969E8 191 aaKnown RBP27.93■■■□□ 2.06
ABCF3-202ENST00000421340 TSPYL4Q9UJ04 414 aa27.92■■■□□ 2.06
ABCF3-202ENST00000421340 THSD7AQ9UPZ6 1657 aa27.91■■■□□ 2.06
ABCF3-202ENST00000421340 MRC1P22897 1456 aa27.91■■■□□ 2.06
ABCF3-202ENST00000421340 RBM6P78332 1123 aaKnown RBP27.91■■■□□ 2.06
ABCF3-202ENST00000421340 CABP4P57796 275 aa27.9■■■□□ 2.06
ABCF3-202ENST00000421340 MARCH10Q8NA82 808 aaPredicted RBP27.9■■■□□ 2.06
ABCF3-202ENST00000421340 BTBD11A6QL63 1104 aa27.89■■■□□ 2.06
ABCF3-202ENST00000421340 SCN11AQ9UI33 1791 aa27.88■■■□□ 2.05
ABCF3-202ENST00000421340 EXOSC9Q06265 439 aaKnown RBP27.88■■■□□ 2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms