RNA–Protein interactions for RNA: ENST00000420809.1

SNRPCP19-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 19, humanhuman

BASIC

Gene SNRPCP19, Length 460 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP19-201ENST00000420809 SHANK3Q9BYB0 1731 aa13.67□□□□□ -0.22
SNRPCP19-201ENST00000420809 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
SNRPCP19-201ENST00000420809 PTGER2P43116 358 aa13.67□□□□□ -0.22
SNRPCP19-201ENST00000420809 SMIM5Q71RC9 77 aa13.67□□□□□ -0.22
SNRPCP19-201ENST00000420809 ZCRB1Q8TBF4 217 aaKnown RBP13.67□□□□□ -0.22
SNRPCP19-201ENST00000420809 RGPD3A6NKT7 1758 aaPredicted RBP13.66□□□□□ -0.22
SNRPCP19-201ENST00000420809 RGPD4Q7Z3J3 1758 aa13.66□□□□□ -0.22
SNRPCP19-201ENST00000420809 KLHL34Q8N239 644 aa13.66□□□□□ -0.22
SNRPCP19-201ENST00000420809 NSD2O96028 1365 aa13.66□□□□□ -0.22
SNRPCP19-201ENST00000420809 KAT6BQ8WYB5 2073 aa13.65□□□□□ -0.22
SNRPCP19-201ENST00000420809 CNGB1Q14028 1251 aaPredicted RBP13.64□□□□□ -0.23
SNRPCP19-201ENST00000420809 PAPPAQ13219 1627 aa13.64□□□□□ -0.23
SNRPCP19-201ENST00000420809 TATP17735 454 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP19-201ENST00000420809 RAPGEF4Q8WZA2 1011 aa13.63□□□□□ -0.23
SNRPCP19-201ENST00000420809 FHDC1Q9C0D6 1143 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP19-201ENST00000420809 RTL1A6NKG5 1358 aa13.62□□□□□ -0.23
SNRPCP19-201ENST00000420809 FLT4P35916 1363 aa13.62□□□□□ -0.23
SNRPCP19-201ENST00000420809 MPRIPQ6WCQ1 1025 aa13.62□□□□□ -0.23
SNRPCP19-201ENST00000420809 INSRP06213 1382 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 CYP27B1O15528 508 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 MSH5O43196 834 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 CDCA8Q53HL2 280 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 MSL1Q68DK7 614 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 AKT1S1Q96B36 256 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 PANK3Q9H999 370 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 SMG6Q86US8 1419 aaKnown RBP13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 PNPLA7Q6ZV29 1317 aa13.61□□□□□ -0.23
SNRPCP19-201ENST00000420809 YY1P25490 414 aa13.6□□□□□ -0.23
SNRPCP19-201ENST00000420809 TFCP2L1Q9NZI6 479 aa13.6□□□□□ -0.23
SNRPCP19-201ENST00000420809 CCNL1Q9UK58 526 aaPredicted RBP13.6□□□□□ -0.23
SNRPCP19-201ENST00000420809 EYA1Q99502 592 aa13.59□□□□□ -0.23
SNRPCP19-201ENST00000420809 SGIP1Q9BQI5 828 aa13.59□□□□□ -0.23
SNRPCP19-201ENST00000420809 MTFR1LQ9H019 292 aa13.59□□□□□ -0.23
SNRPCP19-201ENST00000420809 POLKQ9UBT6 870 aa13.59□□□□□ -0.23
SNRPCP19-201ENST00000420809 UTRNP46939 3433 aa13.59□□□□□ -0.23
SNRPCP19-201ENST00000420809 TUBGCP6Q96RT7 1819 aa13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 SLC24A1O60721 1099 aa13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 EIF4G2P78344 907 aaKnown RBP eCLIP13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 AMIGO3Q86WK7 504 aa13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 PELP1Q8IZL8 1130 aaKnown RBP13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 SYT17Q9BSW7 474 aa13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.24
SNRPCP19-201ENST00000420809 EIF4A2Q14240 407 aaKnown RBP13.57□□□□□ -0.24
SNRPCP19-201ENST00000420809 ARXQ96QS3 562 aa13.57□□□□□ -0.24
SNRPCP19-201ENST00000420809 WWC3Q9ULE0 1092 aa13.57□□□□□ -0.24
SNRPCP19-201ENST00000420809 CGNL1Q0VF96 1302 aa13.57□□□□□ -0.24
SNRPCP19-201ENST00000420809 NLGN2Q8NFZ4 835 aa13.56□□□□□ -0.24
SNRPCP19-201ENST00000420809 PHF14O94880 888 aa13.55□□□□□ -0.24
SNRPCP19-201ENST00000420809 COL23A1Q86Y22 540 aaPredicted RBP13.55□□□□□ -0.24
SNRPCP19-201ENST00000420809 TIMELESSQ9UNS1 1208 aa13.55□□□□□ -0.24
SNRPCP19-201ENST00000420809 PCDH11XQ9BZA7 1347 aa13.55□□□□□ -0.24
SNRPCP19-201ENST00000420809 PCDH11YQ9BZA8 1340 aa13.55□□□□□ -0.24
SNRPCP19-201ENST00000420809 AEBP1Q8IUX7 1158 aa13.54□□□□□ -0.24
SNRPCP19-201ENST00000420809 PIGBQ92521 554 aa13.54□□□□□ -0.24
SNRPCP19-201ENST00000420809 WASHC2AQ641Q2 1341 aa13.54□□□□□ -0.24
SNRPCP19-201ENST00000420809 PALLDQ8WX93 1383 aa13.54□□□□□ -0.24
SNRPCP19-201ENST00000420809 LY75O60449 1722 aa13.53□□□□□ -0.24
SNRPCP19-201ENST00000420809 MAP2P11137 1827 aaKnown RBP13.53□□□□□ -0.24
SNRPCP19-201ENST00000420809 SLC27A3Q5K4L6 730 aa13.53□□□□□ -0.24
SNRPCP19-201ENST00000420809 CLSPNQ9HAW4 1339 aa13.53□□□□□ -0.24
SNRPCP19-201ENST00000420809 ASAP1Q9ULH1 1129 aa13.52□□□□□ -0.25
SNRPCP19-201ENST00000420809 ANKRD26Q9UPS8 1709 aa13.51□□□□□ -0.25
SNRPCP19-201ENST00000420809 DCAF8L1A6NGE4 600 aa13.51□□□□□ -0.25
SNRPCP19-201ENST00000420809 MORC1Q86VD1 984 aa13.51□□□□□ -0.25
SNRPCP19-201ENST00000420809 GOLGB1Q14789 3259 aaKnown RBP13.51□□□□□ -0.25
SNRPCP19-201ENST00000420809 PHKG2P15735 406 aa13.5□□□□□ -0.25
SNRPCP19-201ENST00000420809 LINC00116Q8NCU8 138 aa13.5□□□□□ -0.25
SNRPCP19-201ENST00000420809 SPG7Q9UQ90 795 aa13.5□□□□□ -0.25
SNRPCP19-201ENST00000420809 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
SNRPCP19-201ENST00000420809 C5P01031 1676 aa13.5□□□□□ -0.25
SNRPCP19-201ENST00000420809 KIF7Q2M1P5 1343 aa13.49□□□□□ -0.25
SNRPCP19-201ENST00000420809 ITGB4P16144 1822 aa13.49□□□□□ -0.25
SNRPCP19-201ENST00000420809 POLD1P28340 1107 aa13.49□□□□□ -0.25
SNRPCP19-201ENST00000420809 ITPK1Q13572 414 aa13.49□□□□□ -0.25
SNRPCP19-201ENST00000420809 GPR162Q16538 588 aa13.49□□□□□ -0.25
SNRPCP19-201ENST00000420809 KIF24Q5T7B8 1368 aa13.48□□□□□ -0.25
SNRPCP19-201ENST00000420809 CC2D1BQ5T0F9 858 aaKnown RBP13.48□□□□□ -0.25
SNRPCP19-201ENST00000420809 TMOD3Q9NYL9 352 aa13.48□□□□□ -0.25
SNRPCP19-201ENST00000420809 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
SNRPCP19-201ENST00000420809 AK7Q96M32 723 aa13.47□□□□□ -0.25
SNRPCP19-201ENST00000420809 IGSF1Q8N6C5 1336 aa13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 ZNF530Q6P9A1 599 aaPredicted RBP13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 SLC4A9Q96Q91 983 aa13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 RBM42Q9BTD8 480 aaKnown RBP13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 ATG3Q9NT62 314 aa13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 C4BP0C0L5 1744 aa13.46□□□□□ -0.25
SNRPCP19-201ENST00000420809 LOC102724428A0A0B4J2F2 783 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 HMOX1P09601 288 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 YBX3P16989 372 aaKnown RBP eCLIP13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 ATP6V1AP38606 617 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 SIK1P57059 783 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 SULT6B1Q6IMI4 303 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 IFNL2Q8IZJ0 200 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 KNSTRNQ9Y448 316 aa13.45□□□□□ -0.26
SNRPCP19-201ENST00000420809 TAF1LQ8IZX4 1826 aa13.44□□□□□ -0.26
SNRPCP19-201ENST00000420809 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.44□□□□□ -0.26
SNRPCP19-201ENST00000420809 GNPATO15228 680 aa13.44□□□□□ -0.26
SNRPCP19-201ENST00000420809 ZNF784Q8NCA9 323 aaPredicted RBP13.44□□□□□ -0.26
SNRPCP19-201ENST00000420809 KDM6AO15550 1401 aaPredicted RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms