RNA–Protein interactions for RNA: ENST00000420706.1

TMEM53-206, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-206ENST00000420706 HNRNPUQ00839 825 aaKnown RBP eCLIP16.49■□□□□ 0.23
TMEM53-206ENST00000420706 AMOTQ4VCS5 1084 aa16.49■□□□□ 0.23
TMEM53-206ENST00000420706 ZNF772Q68DY9 489 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-206ENST00000420706 BARGINQ6ZT62 677 aa16.49■□□□□ 0.23
TMEM53-206ENST00000420706 GJD4Q96KN9 370 aaPredicted RBP16.49■□□□□ 0.23
TMEM53-206ENST00000420706 DISP2A7MBM2 1401 aa16.48■□□□□ 0.23
TMEM53-206ENST00000420706 NFE2L2Q16236 605 aa16.48■□□□□ 0.23
TMEM53-206ENST00000420706 GAS2L2Q8NHY3 880 aa16.48■□□□□ 0.23
TMEM53-206ENST00000420706 YTHDC1Q96MU7 727 aaKnown RBP16.48■□□□□ 0.23
TMEM53-206ENST00000420706 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.48■□□□□ 0.23
TMEM53-206ENST00000420706 RRP7AQ9Y3A4 280 aaKnown RBP16.48■□□□□ 0.23
TMEM53-206ENST00000420706 PLEKHG2Q9H7P9 1386 aa16.48■□□□□ 0.23
TMEM53-206ENST00000420706 RIPK4P57078 832 aa16.47■□□□□ 0.23
TMEM53-206ENST00000420706 NEUROD2Q15784 382 aa16.47■□□□□ 0.23
TMEM53-206ENST00000420706 NCBP3Q53F19 620 aaKnown RBP16.47■□□□□ 0.23
TMEM53-206ENST00000420706 POTEAQ6S8J7 498 aa16.47■□□□□ 0.23
TMEM53-206ENST00000420706 ILDR2Q71H61 639 aa16.47■□□□□ 0.23
TMEM53-206ENST00000420706 CDCA7Q9BWT1 371 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-206ENST00000420706 SALL2Q9Y467 1007 aaPredicted RBP16.47■□□□□ 0.23
TMEM53-206ENST00000420706 OVOS2A0A0G2JMS6 1433 aa16.46■□□□□ 0.23
TMEM53-206ENST00000420706 NGEFQ8N5V2 710 aa16.46■□□□□ 0.23
TMEM53-206ENST00000420706 ZCRB1Q8TBF4 217 aaKnown RBP16.46■□□□□ 0.23
TMEM53-206ENST00000420706 SPG7Q9UQ90 795 aa16.46■□□□□ 0.23
TMEM53-206ENST00000420706 FAM98CQ17RN3 349 aaKnown RBP16.45■□□□□ 0.22
TMEM53-206ENST00000420706 GLI3P10071 1580 aa16.45■□□□□ 0.22
TMEM53-206ENST00000420706 PARP4Q9UKK3 1724 aaKnown RBP16.45■□□□□ 0.22
TMEM53-206ENST00000420706 EXOC5O00471 708 aa16.44■□□□□ 0.22
TMEM53-206ENST00000420706 ONECUT3O60422 494 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-206ENST00000420706 ZNF530Q6P9A1 599 aaPredicted RBP16.44■□□□□ 0.22
TMEM53-206ENST00000420706 TRIM35Q9UPQ4 493 aa16.44■□□□□ 0.22
TMEM53-206ENST00000420706 WNK3Q9BYP7 1800 aa16.44■□□□□ 0.22
TMEM53-206ENST00000420706 CCDC27Q2M243 656 aa16.43■□□□□ 0.22
TMEM53-206ENST00000420706 DLG5Q8TDM6 1919 aa16.43■□□□□ 0.22
TMEM53-206ENST00000420706 PKD1L3Q7Z443 1732 aa16.42■□□□□ 0.22
TMEM53-206ENST00000420706 CYP27B1O15528 508 aa16.42■□□□□ 0.22
TMEM53-206ENST00000420706 AKAP4Q5JQC9 854 aa16.42■□□□□ 0.22
TMEM53-206ENST00000420706 IFNL2Q8IZJ0 200 aa16.42■□□□□ 0.22
TMEM53-206ENST00000420706 GNAT3A8MTJ3 354 aa16.41■□□□□ 0.22
TMEM53-206ENST00000420706 HTATSF1O43719 755 aaKnown RBP16.41■□□□□ 0.22
TMEM53-206ENST00000420706 PHKG2P15735 406 aa16.41■□□□□ 0.22
TMEM53-206ENST00000420706 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
TMEM53-206ENST00000420706 DDB1Q16531 1140 aa16.41■□□□□ 0.22
TMEM53-206ENST00000420706 C1orf141Q5JVX7 400 aa16.41■□□□□ 0.22
TMEM53-206ENST00000420706 WWC1Q8IX03 1113 aa16.41■□□□□ 0.22
TMEM53-206ENST00000420706 RXRBP28702 533 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 LMOD3Q0VAK6 560 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 DDX54Q8TDD1 881 aaKnown RBP16.4■□□□□ 0.22
TMEM53-206ENST00000420706 ZBED9Q6R2W3 1325 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 ZNF521Q96K83 1311 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 PCDH11XQ9BZA7 1347 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 PCDH11YQ9BZA8 1340 aa16.4■□□□□ 0.22
TMEM53-206ENST00000420706 MAP3K5Q99683 1374 aa16.39■□□□□ 0.21
TMEM53-206ENST00000420706 DCTN1Q14203 1278 aa16.39■□□□□ 0.21
TMEM53-206ENST00000420706 IL17REQ8NFR9 667 aa16.39■□□□□ 0.21
TMEM53-206ENST00000420706 RTF1Q92541 710 aaKnown RBP16.39■□□□□ 0.21
TMEM53-206ENST00000420706 SHANK3Q9BYB0 1731 aa16.39■□□□□ 0.21
TMEM53-206ENST00000420706 NKX1-1Q15270 411 aaPredicted RBP16.38■□□□□ 0.21
TMEM53-206ENST00000420706 MPRIPQ6WCQ1 1025 aa16.38■□□□□ 0.21
TMEM53-206ENST00000420706 MCM10Q7L590 875 aa16.38■□□□□ 0.21
TMEM53-206ENST00000420706 SEPT12Q8IYM1 358 aa16.38■□□□□ 0.21
TMEM53-206ENST00000420706 LGR6Q9HBX8 967 aa16.38■□□□□ 0.21
TMEM53-206ENST00000420706 THSD7AQ9UPZ6 1657 aa16.37■□□□□ 0.21
TMEM53-206ENST00000420706 RNMTO43148 476 aaKnown RBP16.37■□□□□ 0.21
TMEM53-206ENST00000420706 HSP90AB1P08238 724 aaKnown RBP16.37■□□□□ 0.21
TMEM53-206ENST00000420706 WDR63Q8IWG1 891 aa16.37■□□□□ 0.21
TMEM53-206ENST00000420706 TNS2Q63HR2 1409 aa16.36■□□□□ 0.21
TMEM53-206ENST00000420706 A0A0G2JS52 829 aa16.36■□□□□ 0.21
TMEM53-206ENST00000420706 MYT1Q01538 1121 aa16.36■□□□□ 0.21
TMEM53-206ENST00000420706 MARCH10Q8NA82 808 aaPredicted RBP16.36■□□□□ 0.21
TMEM53-206ENST00000420706 THUMPD2Q9BTF0 503 aaKnown RBP16.36■□□□□ 0.21
TMEM53-206ENST00000420706 LRRC37A3O60309 1634 aa16.36■□□□□ 0.21
TMEM53-206ENST00000420706 PDE3BQ13370 1112 aa16.35■□□□□ 0.21
TMEM53-206ENST00000420706 DCAF5Q96JK2 942 aa16.35■□□□□ 0.21
TMEM53-206ENST00000420706 GOLGA2Q08379 1002 aa16.34■□□□□ 0.21
TMEM53-206ENST00000420706 CEMIPQ8WUJ3 1361 aa16.34■□□□□ 0.21
TMEM53-206ENST00000420706 KDM6AO15550 1401 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-206ENST00000420706 ADAMTS7Q9UKP4 1686 aa16.33■□□□□ 0.2
TMEM53-206ENST00000420706 CALD1Q05682 793 aaKnown RBP16.32■□□□□ 0.2
TMEM53-206ENST00000420706 IL16Q14005 1332 aa16.32■□□□□ 0.2
TMEM53-206ENST00000420706 VIRMAQ69YN4 1812 aaKnown RBP16.32■□□□□ 0.2
TMEM53-206ENST00000420706 CDCA7LQ96GN5 454 aa16.32■□□□□ 0.2
TMEM53-206ENST00000420706 SPINK5Q9NQ38 1064 aaPredicted RBP16.32■□□□□ 0.2
TMEM53-206ENST00000420706 SCN11AQ9UI33 1791 aa16.32■□□□□ 0.2
TMEM53-206ENST00000420706 ZNF853P0CG23 659 aa16.31■□□□□ 0.2
TMEM53-206ENST00000420706 SLFN5Q08AF3 891 aa16.31■□□□□ 0.2
TMEM53-206ENST00000420706 ERVV-2B6SEH9 535 aa16.3■□□□□ 0.2
TMEM53-206ENST00000420706 TAF7Q15545 349 aaPredicted RBP16.3■□□□□ 0.2
TMEM53-206ENST00000420706 CFAP44Q96MT7 982 aa16.3■□□□□ 0.2
TMEM53-206ENST00000420706 E9PSI1 815 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 GNAI1P63096 354 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 TEFQ10587 303 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 KRT27Q7Z3Y8 459 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 TRMT2AQ8IZ69 625 aaKnown RBP16.29■□□□□ 0.2
TMEM53-206ENST00000420706 NFATC2IPQ8NCF5 419 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 SLC52A2Q9HAB3 445 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 IFT57Q9NWB7 429 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 LAS1LQ9Y4W2 734 aaKnown RBP16.29■□□□□ 0.2
TMEM53-206ENST00000420706 BRWD3Q6RI45 1802 aa16.29■□□□□ 0.2
TMEM53-206ENST00000420706 CHL1O00533 1208 aa16.28■□□□□ 0.2
TMEM53-206ENST00000420706 CABP4P57796 275 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms