RNA–Protein interactions for RNA: ENST00000420681.6

SEMA4D-206, Transcript of semaphorin 4D, humanhuman

TSL 5

Gene SEMA4D, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-206ENST00000420681 DIAPH1O60610 1272 aaKnown RBP23.33■■□□□ 1.33
SEMA4D-206ENST00000420681 VIRMAQ69YN4 1812 aaKnown RBP23.33■■□□□ 1.32
SEMA4D-206ENST00000420681 MARCH10Q8NA82 808 aaPredicted RBP23.32■■□□□ 1.32
SEMA4D-206ENST00000420681 PRKRIP1Q9H875 184 aaPredicted RBP23.32■■□□□ 1.32
SEMA4D-206ENST00000420681 MYBBP1AQ9BQG0 1328 aaKnown RBP23.32■■□□□ 1.32
SEMA4D-206ENST00000420681 KDRP35968 1356 aa23.31■■□□□ 1.32
SEMA4D-206ENST00000420681 EXOC5O00471 708 aa23.31■■□□□ 1.32
SEMA4D-206ENST00000420681 TATP17735 454 aaPredicted RBP23.31■■□□□ 1.32
SEMA4D-206ENST00000420681 CFAP53Q96M91 514 aa23.31■■□□□ 1.32
SEMA4D-206ENST00000420681 SULT6B1Q6IMI4 303 aa23.29■■□□□ 1.32
SEMA4D-206ENST00000420681 UPF1Q92900 1129 aaKnown RBP eCLIP23.29■■□□□ 1.32
SEMA4D-206ENST00000420681 BTAF1O14981 1849 aa23.27■■□□□ 1.32
SEMA4D-206ENST00000420681 U2SURPO15042 1029 aaKnown RBP23.27■■□□□ 1.32
SEMA4D-206ENST00000420681 HMOX1P09601 288 aa23.27■■□□□ 1.32
SEMA4D-206ENST00000420681 ZCRB1Q8TBF4 217 aaKnown RBP23.27■■□□□ 1.32
SEMA4D-206ENST00000420681 ITGB4P16144 1822 aa23.26■■□□□ 1.31
SEMA4D-206ENST00000420681 DDX54Q8TDD1 881 aaKnown RBP23.25■■□□□ 1.31
SEMA4D-206ENST00000420681 PCDH11XQ9BZA7 1347 aa23.25■■□□□ 1.31
SEMA4D-206ENST00000420681 PCDH11YQ9BZA8 1340 aa23.25■■□□□ 1.31
SEMA4D-206ENST00000420681 BCL9O00512 1426 aa23.25■■□□□ 1.31
SEMA4D-206ENST00000420681 FAM196AQ6ZSG2 479 aa23.24■■□□□ 1.31
SEMA4D-206ENST00000420681 PLEKHG2Q9H7P9 1386 aa23.24■■□□□ 1.31
SEMA4D-206ENST00000420681 TRIM37O94972 964 aa23.21■■□□□ 1.31
SEMA4D-206ENST00000420681 RGPD3A6NKT7 1758 aaPredicted RBP23.21■■□□□ 1.31
SEMA4D-206ENST00000420681 RGPD4Q7Z3J3 1758 aa23.21■■□□□ 1.31
SEMA4D-206ENST00000420681 SCN11AQ9UI33 1791 aa23.21■■□□□ 1.31
SEMA4D-206ENST00000420681 CYP27B1O15528 508 aa23.2■■□□□ 1.3
SEMA4D-206ENST00000420681 RREB1Q92766 1687 aa23.19■■□□□ 1.3
SEMA4D-206ENST00000420681 SPG7Q9UQ90 795 aa23.19■■□□□ 1.3
SEMA4D-206ENST00000420681 DLG5Q8TDM6 1919 aa23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 U2AF1L5P0DN76 240 aaPredicted RBP23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 U2AF1Q01081 240 aaKnown RBP eCLIP23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 PTF1AQ7RTS3 328 aa23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 ACSBG1Q96GR2 724 aa23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 NUDCQ9Y266 331 aa23.18■■□□□ 1.3
SEMA4D-206ENST00000420681 ANP32CO43423 234 aa23.17■■□□□ 1.3
SEMA4D-206ENST00000420681 RSPH6AQ9H0K4 717 aa23.17■■□□□ 1.3
SEMA4D-206ENST00000420681 ZNF530Q6P9A1 599 aaPredicted RBP23.16■■□□□ 1.3
SEMA4D-206ENST00000420681 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.16■■□□□ 1.3
SEMA4D-206ENST00000420681 ADAMTS7Q9UKP4 1686 aa23.16■■□□□ 1.3
SEMA4D-206ENST00000420681 NUP188Q5SRE5 1749 aa23.15■■□□□ 1.3
SEMA4D-206ENST00000420681 KDM6AO15550 1401 aaPredicted RBP23.15■■□□□ 1.3
SEMA4D-206ENST00000420681 KCNQ2O43526 872 aa23.14■■□□□ 1.29
SEMA4D-206ENST00000420681 PHKG2P15735 406 aa23.14■■□□□ 1.29
SEMA4D-206ENST00000420681 PRKAR2BP31323 418 aa23.14■■□□□ 1.29
SEMA4D-206ENST00000420681 PLEKHO1Q53GL0 409 aaPredicted RBP23.14■■□□□ 1.29
SEMA4D-206ENST00000420681 DEFB132Q7Z7B7 95 aa23.13■■□□□ 1.29
SEMA4D-206ENST00000420681 SF3B2Q13435 895 aaKnown RBP23.12■■□□□ 1.29
SEMA4D-206ENST00000420681 AMOTQ4VCS5 1084 aa23.12■■□□□ 1.29
SEMA4D-206ENST00000420681 CCDC184Q52MB2 194 aa23.12■■□□□ 1.29
SEMA4D-206ENST00000420681 LY75O60449 1722 aa23.11■■□□□ 1.29
SEMA4D-206ENST00000420681 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
SEMA4D-206ENST00000420681 IFNL2Q8IZJ0 200 aa23.11■■□□□ 1.29
SEMA4D-206ENST00000420681 MTHFSDQ2M296 383 aaKnown RBP23.1■■□□□ 1.29
SEMA4D-206ENST00000420681 BCL11BQ9C0K0 894 aaPredicted RBP23.1■■□□□ 1.29
SEMA4D-206ENST00000420681 SYTL4Q96C24 671 aaPredicted RBP23.09■■□□□ 1.29
SEMA4D-206ENST00000420681 SIPA1L3O60292 1781 aaPredicted RBP23.09■■□□□ 1.29
SEMA4D-206ENST00000420681 APBA3O96018 575 aa23.08■■□□□ 1.29
SEMA4D-206ENST00000420681 BAG6P46379 1132 aa23.08■■□□□ 1.29
SEMA4D-206ENST00000420681 NKX1-1Q15270 411 aaPredicted RBP23.08■■□□□ 1.29
SEMA4D-206ENST00000420681 C1orf141Q5JVX7 400 aa23.08■■□□□ 1.29
SEMA4D-206ENST00000420681 PHACTR3Q96KR7 559 aa23.08■■□□□ 1.29
SEMA4D-206ENST00000420681 MRC1P22897 1456 aa23.07■■□□□ 1.28
SEMA4D-206ENST00000420681 PRIM1P49642 420 aaKnown RBP23.07■■□□□ 1.28
SEMA4D-206ENST00000420681 EN1Q05925 392 aaPredicted RBP23.07■■□□□ 1.28
SEMA4D-206ENST00000420681 FCHSD2O94868 740 aa23.06■■□□□ 1.28
SEMA4D-206ENST00000420681 PAPPAQ13219 1627 aa23.06■■□□□ 1.28
SEMA4D-206ENST00000420681 MAP3K5Q99683 1374 aa23.05■■□□□ 1.28
SEMA4D-206ENST00000420681 WDR43Q15061 677 aaKnown RBP eCLIP23.05■■□□□ 1.28
SEMA4D-206ENST00000420681 AKAP4Q5JQC9 854 aa23.04■■□□□ 1.28
SEMA4D-206ENST00000420681 MPRIPQ6WCQ1 1025 aa23.04■■□□□ 1.28
SEMA4D-206ENST00000420681 EZH2Q15910 746 aaKnown RBP23.03■■□□□ 1.28
SEMA4D-206ENST00000420681 GAS2L2Q8NHY3 880 aa23.03■■□□□ 1.28
SEMA4D-206ENST00000420681 HSP90AB1P08238 724 aaKnown RBP23.02■■□□□ 1.28
SEMA4D-206ENST00000420681 PLEKHF1Q96S99 279 aa23.02■■□□□ 1.28
SEMA4D-206ENST00000420681 MRS2Q9HD23 443 aa23.02■■□□□ 1.28
SEMA4D-206ENST00000420681 TAF1LQ8IZX4 1826 aa23.01■■□□□ 1.27
SEMA4D-206ENST00000420681 DCAF5Q96JK2 942 aa23.01■■□□□ 1.27
SEMA4D-206ENST00000420681 CAMKK2Q96RR4 588 aa23.01■■□□□ 1.27
SEMA4D-206ENST00000420681 CCDC146Q8IYE0 955 aa23■■□□□ 1.27
SEMA4D-206ENST00000420681 C5P01031 1676 aa23■■□□□ 1.27
SEMA4D-206ENST00000420681 ADAMTS8Q9UP79 889 aa22.99■■□□□ 1.27
SEMA4D-206ENST00000420681 MAPK8IP3Q9UPT6 1336 aa22.99■■□□□ 1.27
SEMA4D-206ENST00000420681 TUBGCP6Q96RT7 1819 aa22.98■■□□□ 1.27
SEMA4D-206ENST00000420681 TMOD3Q9NYL9 352 aa22.98■■□□□ 1.27
SEMA4D-206ENST00000420681 UBR2Q8IWV8 1755 aa22.98■■□□□ 1.27
SEMA4D-206ENST00000420681 RNMTO43148 476 aaKnown RBP22.97■■□□□ 1.27
SEMA4D-206ENST00000420681 DIEXFQ68CQ4 756 aaKnown RBP22.97■■□□□ 1.27
SEMA4D-206ENST00000420681 PIGBQ92521 554 aa22.97■■□□□ 1.27
SEMA4D-206ENST00000420681 LGR6Q9HBX8 967 aa22.97■■□□□ 1.27
SEMA4D-206ENST00000420681 GNAT3A8MTJ3 354 aa22.96■■□□□ 1.27
SEMA4D-206ENST00000420681 PLSCR1O15162 318 aa22.96■■□□□ 1.27
SEMA4D-206ENST00000420681 PALLDQ8WX93 1383 aa22.96■■□□□ 1.27
SEMA4D-206ENST00000420681 ERVV-2B6SEH9 535 aa22.95■■□□□ 1.26
SEMA4D-206ENST00000420681 NEFMP07197 916 aa22.95■■□□□ 1.26
SEMA4D-206ENST00000420681 TJP1Q07157 1748 aa22.94■■□□□ 1.26
SEMA4D-206ENST00000420681 CABP4P57796 275 aa22.94■■□□□ 1.26
SEMA4D-206ENST00000420681 NFE2L2Q16236 605 aa22.93■■□□□ 1.26
SEMA4D-206ENST00000420681 TXNRD1Q16881 649 aa22.93■■□□□ 1.26
SEMA4D-206ENST00000420681 PNNQ9H307 717 aaKnown RBP22.93■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms