RNA–Protein interactions for RNA: ENST00000420394.5

SSUH2-205, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,634 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-205ENST00000420394 LRRC37A3O60309 1634 aa25.89■■□□□ 1.73
SSUH2-205ENST00000420394 HDAC1Q13547 482 aaPredicted RBP25.88■■□□□ 1.73
SSUH2-205ENST00000420394 MCM10Q7L590 875 aa25.88■■□□□ 1.73
SSUH2-205ENST00000420394 TMEM57Q8N5G2 664 aa25.88■■□□□ 1.73
SSUH2-205ENST00000420394 C8orf58Q8NAV2 365 aa25.88■■□□□ 1.73
SSUH2-205ENST00000420394 SOS1Q07889 1333 aaPredicted RBP25.88■■□□□ 1.73
SSUH2-205ENST00000420394 KRT28Q7Z3Y7 464 aa25.88■■□□□ 1.73
SSUH2-205ENST00000420394 GNAT3A8MTJ3 354 aa25.87■■□□□ 1.73
SSUH2-205ENST00000420394 FAM161AQ3B820 660 aa25.87■■□□□ 1.73
SSUH2-205ENST00000420394 CADPS2Q86UW7 1296 aa25.87■■□□□ 1.73
SSUH2-205ENST00000420394 ABCC4O15439 1325 aa25.86■■□□□ 1.73
SSUH2-205ENST00000420394 MAP3K5Q99683 1374 aa25.86■■□□□ 1.73
SSUH2-205ENST00000420394 GCP02774 474 aa25.85■■□□□ 1.73
SSUH2-205ENST00000420394 ARHGEF25Q86VW2 580 aa25.85■■□□□ 1.73
SSUH2-205ENST00000420394 ZBTB40Q9NUA8 1239 aa25.85■■□□□ 1.73
SSUH2-205ENST00000420394 NCAPD2Q15021 1401 aa25.83■■□□□ 1.73
SSUH2-205ENST00000420394 MSH6P52701 1360 aa25.82■■□□□ 1.72
SSUH2-205ENST00000420394 ALS2Q96Q42 1657 aa25.82■■□□□ 1.72
SSUH2-205ENST00000420394 STRCP1A6NGW2 1772 aa25.82■■□□□ 1.72
SSUH2-205ENST00000420394 TSPYL4Q9UJ04 414 aa25.81■■□□□ 1.72
SSUH2-205ENST00000420394 PTPRCP08575 1304 aa25.81■■□□□ 1.72
SSUH2-205ENST00000420394 ELL2O00472 640 aaPredicted RBP25.81■■□□□ 1.72
SSUH2-205ENST00000420394 LTV1Q96GA3 475 aaPredicted RBP25.81■■□□□ 1.72
SSUH2-205ENST00000420394 NPHP3Q7Z494 1330 aa25.8■■□□□ 1.72
SSUH2-205ENST00000420394 RGS3P49796 1198 aa25.8■■□□□ 1.72
SSUH2-205ENST00000420394 ABCC6O95255 1503 aa25.77■■□□□ 1.72
SSUH2-205ENST00000420394 AMOTQ4VCS5 1084 aa25.77■■□□□ 1.72
SSUH2-205ENST00000420394 LMTK3Q96Q04 1460 aa25.77■■□□□ 1.72
SSUH2-205ENST00000420394 CAMTA1Q9Y6Y1 1673 aa25.77■■□□□ 1.72
SSUH2-205ENST00000420394 ZBTB7BO15156 539 aaPredicted RBP25.76■■□□□ 1.71
SSUH2-205ENST00000420394 SKAP1Q86WV1 359 aa25.76■■□□□ 1.71
SSUH2-205ENST00000420394 IPO9Q96P70 1041 aaKnown RBP25.76■■□□□ 1.71
SSUH2-205ENST00000420394 CHMP4AQ9BY43 222 aa25.76■■□□□ 1.71
SSUH2-205ENST00000420394 PLEKHG2Q9H7P9 1386 aa25.76■■□□□ 1.71
SSUH2-205ENST00000420394 NBPF6Q5VWK0 638 aa25.75■■□□□ 1.71
SSUH2-205ENST00000420394 NBPF4Q96M43 638 aa25.75■■□□□ 1.71
SSUH2-205ENST00000420394 XPCQ01831 940 aaPredicted RBP25.74■■□□□ 1.71
SSUH2-205ENST00000420394 C8orf34Q49A92 452 aa25.74■■□□□ 1.71
SSUH2-205ENST00000420394 LMOD2Q6P5Q4 547 aa25.74■■□□□ 1.71
SSUH2-205ENST00000420394 SMC5Q8IY18 1101 aa25.74■■□□□ 1.71
SSUH2-205ENST00000420394 PDZRN3Q9UPQ7 1066 aa25.74■■□□□ 1.71
SSUH2-205ENST00000420394 OVOS2A0A0G2JMS6 1433 aa25.74■■□□□ 1.71
SSUH2-205ENST00000420394 TAF7Q15545 349 aaPredicted RBP25.74■■□□□ 1.71
SSUH2-205ENST00000420394 PLEKHO1Q53GL0 409 aaPredicted RBP25.74■■□□□ 1.71
SSUH2-205ENST00000420394 CEMIPQ8WUJ3 1361 aa25.73■■□□□ 1.71
SSUH2-205ENST00000420394 INTS3Q68E01 1043 aaKnown RBP25.73■■□□□ 1.71
SSUH2-205ENST00000420394 TNS3Q68CZ2 1445 aa25.72■■□□□ 1.71
SSUH2-205ENST00000420394 HSPA2P54652 639 aa25.72■■□□□ 1.71
SSUH2-205ENST00000420394 MSH5O43196 834 aa25.71■■□□□ 1.71
SSUH2-205ENST00000420394 ERICH6Q7L0X2 663 aa25.71■■□□□ 1.71
SSUH2-205ENST00000420394 ANKRD24Q8TF21 1146 aa25.71■■□□□ 1.71
SSUH2-205ENST00000420394 MED1Q15648 1581 aaPredicted RBP25.71■■□□□ 1.71
SSUH2-205ENST00000420394 AKAP4Q5JQC9 854 aa25.7■■□□□ 1.71
SSUH2-205ENST00000420394 LMO7Q8WWI1 1683 aa25.7■■□□□ 1.7
SSUH2-205ENST00000420394 ZBTB7CA1YPR0 619 aa25.7■■□□□ 1.7
SSUH2-205ENST00000420394 IL17REQ8NFR9 667 aa25.7■■□□□ 1.7
SSUH2-205ENST00000420394 USHBP1Q8N6Y0 703 aa25.69■■□□□ 1.7
SSUH2-205ENST00000420394 GCC1Q96CN9 775 aa25.69■■□□□ 1.7
SSUH2-205ENST00000420394 STK31Q9BXU1 1019 aa25.69■■□□□ 1.7
SSUH2-205ENST00000420394 VIRMAQ69YN4 1812 aaKnown RBP25.68■■□□□ 1.7
SSUH2-205ENST00000420394 DDRGK1Q96HY6 314 aa25.68■■□□□ 1.7
SSUH2-205ENST00000420394 RGS12O14924 1447 aa25.67■■□□□ 1.7
SSUH2-205ENST00000420394 CCDC30Q5VVM6 783 aa25.67■■□□□ 1.7
SSUH2-205ENST00000420394 PXDNQ92626 1479 aa25.67■■□□□ 1.7
SSUH2-205ENST00000420394 STRCQ7RTU9 1775 aa25.67■■□□□ 1.7
SSUH2-205ENST00000420394 KDM4FA0A1W2PPD8 638 aa25.66■■□□□ 1.7
SSUH2-205ENST00000420394 KRT24Q2M2I5 525 aa25.66■■□□□ 1.7
SSUH2-205ENST00000420394 HOXB7P09629 217 aa25.66■■□□□ 1.7
SSUH2-205ENST00000420394 ERBB3P21860 1342 aa25.66■■□□□ 1.7
SSUH2-205ENST00000420394 SLC4A2P04920 1241 aa25.65■■□□□ 1.7
SSUH2-205ENST00000420394 MIS18AQ9NYP9 233 aa25.65■■□□□ 1.7
SSUH2-205ENST00000420394 NOP58Q9Y2X3 529 aaKnown RBP25.65■■□□□ 1.7
SSUH2-205ENST00000420394 FAM208AQ9UK61 1670 aaKnown RBP25.63■■□□□ 1.69
SSUH2-205ENST00000420394 C1orf141Q5JVX7 400 aa25.63■■□□□ 1.69
SSUH2-205ENST00000420394 ZNF530Q6P9A1 599 aaPredicted RBP25.63■■□□□ 1.69
SSUH2-205ENST00000420394 LRRC59Q96AG4 307 aaKnown RBP25.63■■□□□ 1.69
SSUH2-205ENST00000420394 SPATA31A3Q5VYP0 1347 aa25.63■■□□□ 1.69
SSUH2-205ENST00000420394 XIRP1Q702N8 1843 aaKnown RBP25.63■■□□□ 1.69
SSUH2-205ENST00000420394 ANP32EQ9BTT0 268 aa25.63■■□□□ 1.69
SSUH2-205ENST00000420394 CACNA1FO60840 1977 aa25.63■■□□□ 1.69
SSUH2-205ENST00000420394 CCT4P50991 539 aaKnown RBP25.62■■□□□ 1.69
SSUH2-205ENST00000420394 NUCB1Q02818 461 aa25.62■■□□□ 1.69
SSUH2-205ENST00000420394 ZBTB47Q9UFB7 747 aaPredicted RBP25.62■■□□□ 1.69
SSUH2-205ENST00000420394 CPDO75976 1380 aa25.62■■□□□ 1.69
SSUH2-205ENST00000420394 RGPD2P0DJD1 1756 aa25.62■■□□□ 1.69
SSUH2-205ENST00000420394 NPM2Q86SE8 214 aaKnown RBP25.61■■□□□ 1.69
SSUH2-205ENST00000420394 TEFQ10587 303 aa25.59■■□□□ 1.69
SSUH2-205ENST00000420394 RPAP2Q8IXW5 612 aaPredicted RBP25.59■■□□□ 1.69
SSUH2-205ENST00000420394 AXIN2Q9Y2T1 843 aa25.59■■□□□ 1.69
SSUH2-205ENST00000420394 KDM3BQ7LBC6 1761 aa25.58■■□□□ 1.69
SSUH2-205ENST00000420394 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.58■■□□□ 1.696e-7■□□□□ 10.9
SSUH2-205ENST00000420394 PXDNLA1KZ92 1463 aa25.58■■□□□ 1.68
SSUH2-205ENST00000420394 CRYBG1Q9Y4K1 1723 aa25.58■■□□□ 1.68
SSUH2-205ENST00000420394 COL18A1P39060 1754 aa25.56■■□□□ 1.68
SSUH2-205ENST00000420394 ZC3H6P61129 1189 aaKnown RBP25.56■■□□□ 1.68
SSUH2-205ENST00000420394 BRINP3Q76B58 766 aa25.56■■□□□ 1.68
SSUH2-205ENST00000420394 CHD1LQ86WJ1 897 aa25.56■■□□□ 1.68
SSUH2-205ENST00000420394 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
SSUH2-205ENST00000420394 RAPGEF4Q8WZA2 1011 aa25.55■■□□□ 1.68
SSUH2-205ENST00000420394 ADAMTS7Q9UKP4 1686 aa25.54■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms