RNA–Protein interactions for RNA: ENST00000420239.6

CHD2-202, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best) BASIC

Gene CHD2, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-202ENST00000420239 USP32Q8NFA0 1604 aa7.57□□□□□ -1.2
CHD2-202ENST00000420239 CT47B1P0C2W7 299 aaPredicted RBP7.56□□□□□ -1.2
CHD2-202ENST00000420239 KLHL40Q2TBA0 621 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 JARID2Q92833 1246 aaPredicted RBP7.56□□□□□ -1.2
CHD2-202ENST00000420239 KIF2CQ99661 725 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ZKSCAN5Q9Y2L8 839 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ERVK-7P63135 1459 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 PTPRTO14522 1441 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ADGRB2O60241 1585 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 PPP4R3BQ5MIZ7 849 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ZNF710Q8N1W2 664 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ANP32BQ92688 251 aaKnown RBP7.56□□□□□ -1.2
CHD2-202ENST00000420239 SYCP2Q9BX26 1530 aa7.56□□□□□ -1.2
CHD2-202ENST00000420239 ADGRL1O94910 1474 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 EVI5O60447 810 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 MVPQ14764 893 aaKnown RBP7.55□□□□□ -1.2
CHD2-202ENST00000420239 RUNDC1Q96C34 613 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 CDHR5Q9HBB8 845 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 SBNO2Q9Y2G9 1366 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 G3V3G9 751 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 BAG4O95429 457 aaKnown RBP7.55□□□□□ -1.2
CHD2-202ENST00000420239 MCM6Q14566 821 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 CSPP1Q1MSJ5 1256 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 ZSCAN23Q3MJ62 389 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
CHD2-202ENST00000420239 BCL2L13Q9BXK5 485 aa7.55□□□□□ -1.2
CHD2-202ENST00000420239 DDX49Q9Y6V7 483 aaKnown RBP7.55□□□□□ -1.2
CHD2-202ENST00000420239 CCDC82Q8N4S0 544 aa7.54□□□□□ -1.2
CHD2-202ENST00000420239 GAS2L2Q8NHY3 880 aa7.54□□□□□ -1.2
CHD2-202ENST00000420239 CLTCL1P53675 1640 aa7.54□□□□□ -1.2
CHD2-202ENST00000420239 TBC1D12O60347 775 aa7.54□□□□□ -1.2
CHD2-202ENST00000420239 TSC1Q92574 1164 aa7.54□□□□□ -1.2
CHD2-202ENST00000420239 MYOM2P54296 1465 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 REREQ9P2R6 1566 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 A6NJR5 290 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 ATMINO43313 823 aaPredicted RBP7.53□□□□□ -1.2
CHD2-202ENST00000420239 MCM5P33992 734 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 ATP2B3Q16720 1220 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 SH3D19Q5HYK7 790 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 CAVIN1Q6NZI2 390 aaKnown RBP7.53□□□□□ -1.2
CHD2-202ENST00000420239 JPH4Q96JJ6 628 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 PHOX2BQ99453 314 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 CARD14Q9BXL6 1004 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 GTPBP4Q9BZE4 634 aaKnown RBP7.53□□□□□ -1.2
CHD2-202ENST00000420239 DEPDC5O75140 1603 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 MAP3K4Q9Y6R4 1608 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 IFT172Q9UG01 1749 aa7.53□□□□□ -1.2
CHD2-202ENST00000420239 ERCC6Q03468 1493 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 K7ELQ4 463 aaPredicted RBP7.52□□□□□ -1.2
CHD2-202ENST00000420239 IER5LQ5T953 404 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 ZKSCAN2Q63HK3 967 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 MYRIPQ8NFW9 859 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 TMUB1Q9BVT8 246 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 NPDC1Q9NQX5 325 aaPredicted RBP7.52□□□□□ -1.2
CHD2-202ENST00000420239 LMBRD1Q9NUN5 540 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 TMEM51Q9NW97 253 aa7.52□□□□□ -1.2
CHD2-202ENST00000420239 ZC3H13Q5T200 1668 aaKnown RBP7.52□□□□□ -1.21
CHD2-202ENST00000420239 CFAP74Q9C0B2 1584 aa7.52□□□□□ -1.21
CHD2-202ENST00000420239 ZNF518AQ6AHZ1 1483 aa7.52□□□□□ -1.21
CHD2-202ENST00000420239 CBX1P83916 185 aa7.52□□□□□ -1.21
CHD2-202ENST00000420239 RBM27Q9P2N5 1060 aaKnown RBP7.52□□□□□ -1.21
CHD2-202ENST00000420239 NAP1L2Q9ULW6 460 aaPredicted RBP7.52□□□□□ -1.21
CHD2-202ENST00000420239 TET3O43151 1660 aa7.52□□□□□ -1.21
CHD2-202ENST00000420239 ABCA6Q8N139 1617 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 GOLGA6L22H0YM25 854 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 KIF20AO95235 890 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 MDM2Q00987 491 aaPredicted RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 ASTLQ6HA08 431 aaPredicted RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 DZIP1LQ8IYY4 767 aaKnown RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 TCP11L2Q8N4U5 519 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 CCDC39Q9UFE4 941 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 INO80Q9ULG1 1556 aaPredicted RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 KIF16BQ96L93 1317 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.51□□□□□ -1.21
CHD2-202ENST00000420239 LETM1O95202 739 aaPredicted RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 PLCG2P16885 1265 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 MCTP1Q6DN14 999 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 RRP7AQ9Y3A4 280 aaKnown RBP7.51□□□□□ -1.21
CHD2-202ENST00000420239 VWDEQ8N2E2 1590 aa7.51□□□□□ -1.21
CHD2-202ENST00000420239 NRXN1Q9ULB1 1477 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 CYP2E1P05181 493 aaPredicted RBP7.5□□□□□ -1.21
CHD2-202ENST00000420239 GPT2Q8TD30 523 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 CHMP4BQ9H444 224 aaKnown RBP7.5□□□□□ -1.21
CHD2-202ENST00000420239 DDX19BQ9UMR2 479 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 SETBP1Q9Y6X0 1596 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 ARHGAP5Q13017 1502 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 NOS1P29475 1434 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 PDIA4P13667 645 aaKnown RBP7.5□□□□□ -1.21
CHD2-202ENST00000420239 NCLP19338 710 aaKnown RBP7.5□□□□□ -1.21
CHD2-202ENST00000420239 GTF2F1P35269 517 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHD2-202ENST00000420239 NUCB1Q02818 461 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 EN1Q05925 392 aaPredicted RBP7.5□□□□□ -1.21
CHD2-202ENST00000420239 GPCPD1Q9NPB8 672 aa7.5□□□□□ -1.21
CHD2-202ENST00000420239 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.5□□□□□ -1.21
CHD2-202ENST00000420239 PPRC1Q5VV67 1664 aaKnown RBP7.49□□□□□ -1.21
CHD2-202ENST00000420239 FAM177BA6PVY3 158 aa7.49□□□□□ -1.21
CHD2-202ENST00000420239 BMP2KLQ5H9B9 411 aa7.49□□□□□ -1.21
CHD2-202ENST00000420239 ZBTB7CA1YPR0 619 aa7.48□□□□□ -1.21
CHD2-202ENST00000420239 TNNT2P45379 298 aaPredicted RBP7.48□□□□□ -1.21
CHD2-202ENST00000420239 KIAA2012Q0VF49 1180 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms