RNA–Protein interactions for RNA: ENST00000420162.6

CDRT15-201, CMT1A duplicated region transcript 15, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CDRT15, Length 766 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT15-201ENST00000420162 OVOS2A0A0G2JMS6 1433 aa20.17■□□□□ 0.82
CDRT15-201ENST00000420162 RGS12O14924 1447 aa20.17■□□□□ 0.82
CDRT15-201ENST00000420162 PARP4Q9UKK3 1724 aaKnown RBP20.16■□□□□ 0.82
CDRT15-201ENST00000420162 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
CDRT15-201ENST00000420162 PNNQ9H307 717 aaKnown RBP20.16■□□□□ 0.82
CDRT15-201ENST00000420162 MEGF6O75095 1541 aa20.16■□□□□ 0.82
CDRT15-201ENST00000420162 CCER2I3L3R5 266 aa20.15■□□□□ 0.82
CDRT15-201ENST00000420162 AMOTQ4VCS5 1084 aa20.15■□□□□ 0.82
CDRT15-201ENST00000420162 CCDC184Q52MB2 194 aa20.15■□□□□ 0.82
CDRT15-201ENST00000420162 SPG7Q9UQ90 795 aa20.15■□□□□ 0.82
CDRT15-201ENST00000420162 PLEKHO1Q53GL0 409 aaPredicted RBP20.14■□□□□ 0.81
CDRT15-201ENST00000420162 KRT27Q7Z3Y8 459 aa20.14■□□□□ 0.81
CDRT15-201ENST00000420162 RSPH6AQ9H0K4 717 aa20.14■□□□□ 0.81
CDRT15-201ENST00000420162 TNS2Q63HR2 1409 aa20.13■□□□□ 0.81
CDRT15-201ENST00000420162 MIER1Q8N108 512 aa20.13■□□□□ 0.81
CDRT15-201ENST00000420162 PNISRQ8TF01 805 aaKnown RBP20.12■□□□□ 0.81
CDRT15-201ENST00000420162 NEFMP07197 916 aa20.11■□□□□ 0.81
CDRT15-201ENST00000420162 PRKAR2BP31323 418 aa20.11■□□□□ 0.81
CDRT15-201ENST00000420162 LRRC37A3O60309 1634 aa20.11■□□□□ 0.81
CDRT15-201ENST00000420162 BRWD3Q6RI45 1802 aa20.11■□□□□ 0.81
CDRT15-201ENST00000420162 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
CDRT15-201ENST00000420162 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
CDRT15-201ENST00000420162 DDX54Q8TDD1 881 aaKnown RBP20.1■□□□□ 0.81
CDRT15-201ENST00000420162 ADAMTS8Q9UP79 889 aa20.1■□□□□ 0.81
CDRT15-201ENST00000420162 MARCH10Q8NA82 808 aaPredicted RBP20.09■□□□□ 0.81
CDRT15-201ENST00000420162 PKD1L3Q7Z443 1732 aa20.07■□□□□ 0.8
CDRT15-201ENST00000420162 FAM196AQ6ZSG2 479 aa20.07■□□□□ 0.8
CDRT15-201ENST00000420162 IFNL2Q8IZJ0 200 aa20.07■□□□□ 0.8
CDRT15-201ENST00000420162 PLEKHF1Q96S99 279 aa20.07■□□□□ 0.8
CDRT15-201ENST00000420162 CYP27B1O15528 508 aa20.06■□□□□ 0.8
CDRT15-201ENST00000420162 ZNF530Q6P9A1 599 aaPredicted RBP20.06■□□□□ 0.8
CDRT15-201ENST00000420162 GAS2L2Q8NHY3 880 aa20.06■□□□□ 0.8
CDRT15-201ENST00000420162 PHACTR3Q96KR7 559 aa20.06■□□□□ 0.8
CDRT15-201ENST00000420162 MAPK8IP3Q9UPT6 1336 aa20.05■□□□□ 0.8
CDRT15-201ENST00000420162 MTHFSDQ2M296 383 aaKnown RBP20.05■□□□□ 0.8
CDRT15-201ENST00000420162 C1orf141Q5JVX7 400 aa20.05■□□□□ 0.8
CDRT15-201ENST00000420162 ILDR2Q71H61 639 aa20.05■□□□□ 0.8
CDRT15-201ENST00000420162 BCL9O00512 1426 aa20.04■□□□□ 0.8
CDRT15-201ENST00000420162 HSP90AB1P08238 724 aaKnown RBP20.04■□□□□ 0.8
CDRT15-201ENST00000420162 PHKG2P15735 406 aa20.04■□□□□ 0.8
CDRT15-201ENST00000420162 NKX1-1Q15270 411 aaPredicted RBP20.04■□□□□ 0.8
CDRT15-201ENST00000420162 RUNDC1Q96C34 613 aa20.04■□□□□ 0.8
CDRT15-201ENST00000420162 SHANK3Q9BYB0 1731 aa20.03■□□□□ 0.8
CDRT15-201ENST00000420162 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
CDRT15-201ENST00000420162 FAM182BQ5T319 152 aa20.02■□□□□ 0.8
CDRT15-201ENST00000420162 FAM9BQ8IZU0 186 aa20.01■□□□□ 0.79
CDRT15-201ENST00000420162 KAT6BQ8WYB5 2073 aa20.01■□□□□ 0.79
CDRT15-201ENST00000420162 CCDC146Q8IYE0 955 aa20■□□□□ 0.79
CDRT15-201ENST00000420162 DCAF5Q96JK2 942 aa20■□□□□ 0.79
CDRT15-201ENST00000420162 GNAT3A8MTJ3 354 aa19.99■□□□□ 0.79
CDRT15-201ENST00000420162 NFE2L2Q16236 605 aa19.99■□□□□ 0.79
CDRT15-201ENST00000420162 MAP3K5Q99683 1374 aa19.97■□□□□ 0.79
CDRT15-201ENST00000420162 HTATSF1O43719 755 aaKnown RBP19.97■□□□□ 0.79
CDRT15-201ENST00000420162 TMPOP42166 694 aaKnown RBP19.96■□□□□ 0.79
CDRT15-201ENST00000420162 MPRIPQ6WCQ1 1025 aa19.96■□□□□ 0.79
CDRT15-201ENST00000420162 ERVV-2B6SEH9 535 aa19.95■□□□□ 0.78
CDRT15-201ENST00000420162 CCDC125Q86Z20 511 aa19.95■□□□□ 0.78
CDRT15-201ENST00000420162 RTF1Q92541 710 aaKnown RBP19.95■□□□□ 0.78
CDRT15-201ENST00000420162 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
CDRT15-201ENST00000420162 APAF1O14727 1248 aa19.94■□□□□ 0.78
CDRT15-201ENST00000420162 PRIM1P49642 420 aaKnown RBP19.94■□□□□ 0.78
CDRT15-201ENST00000420162 RIPK4P57078 832 aa19.94■□□□□ 0.78
CDRT15-201ENST00000420162 RNMTO43148 476 aaKnown RBP19.93■□□□□ 0.78
CDRT15-201ENST00000420162 TRIM37O94972 964 aa19.93■□□□□ 0.78
CDRT15-201ENST00000420162 LMOD3Q0VAK6 560 aa19.93■□□□□ 0.78
CDRT15-201ENST00000420162 ACSBG1Q96GR2 724 aa19.93■□□□□ 0.78
CDRT15-201ENST00000420162 SBF2Q86WG5 1849 aa19.92■□□□□ 0.78
CDRT15-201ENST00000420162 SYTL4Q96C24 671 aaPredicted RBP19.92■□□□□ 0.78
CDRT15-201ENST00000420162 LGR6Q9HBX8 967 aa19.92■□□□□ 0.78
CDRT15-201ENST00000420162 KDM6AO15550 1401 aaPredicted RBP19.92■□□□□ 0.78
CDRT15-201ENST00000420162 EP400Q96L91 3159 aa19.91■□□□□ 0.78
CDRT15-201ENST00000420162 KCNQ2O43526 872 aa19.91■□□□□ 0.78
CDRT15-201ENST00000420162 CABP4P57796 275 aa19.91■□□□□ 0.78
CDRT15-201ENST00000420162 IL17REQ8NFR9 667 aa19.91■□□□□ 0.78
CDRT15-201ENST00000420162 SF3B2Q13435 895 aaKnown RBP19.9■□□□□ 0.78
CDRT15-201ENST00000420162 NEUROD2Q15784 382 aa19.9■□□□□ 0.78
CDRT15-201ENST00000420162 NCBP3Q53F19 620 aaKnown RBP19.9■□□□□ 0.78
CDRT15-201ENST00000420162 TMOD3Q9NYL9 352 aa19.9■□□□□ 0.78
CDRT15-201ENST00000420162 RRP7AQ9Y3A4 280 aaKnown RBP19.9■□□□□ 0.78
CDRT15-201ENST00000420162 SCN11AQ9UI33 1791 aa19.9■□□□□ 0.78
CDRT15-201ENST00000420162 DLG5Q8TDM6 1919 aa19.9■□□□□ 0.78
CDRT15-201ENST00000420162 NHSQ6T4R5 1651 aa19.89■□□□□ 0.77
CDRT15-201ENST00000420162 NGEFQ8N5V2 710 aa19.89■□□□□ 0.77
CDRT15-201ENST00000420162 DOT1LQ8TEK3 1739 aa19.89■□□□□ 0.77
CDRT15-201ENST00000420162 ADAMTS7Q9UKP4 1686 aa19.88■□□□□ 0.77
CDRT15-201ENST00000420162 CEMIPQ8WUJ3 1361 aa19.88■□□□□ 0.77
CDRT15-201ENST00000420162 TEFQ10587 303 aa19.88■□□□□ 0.77
CDRT15-201ENST00000420162 MCM10Q7L590 875 aa19.88■□□□□ 0.77
CDRT15-201ENST00000420162 UPF1Q92900 1129 aaKnown RBP eCLIP19.88■□□□□ 0.77
CDRT15-201ENST00000420162 SLC52A2Q9HAB3 445 aa19.88■□□□□ 0.77
CDRT15-201ENST00000420162 NFATC2IPQ8NCF5 419 aa19.87■□□□□ 0.77
CDRT15-201ENST00000420162 PIGBQ92521 554 aa19.87■□□□□ 0.77
CDRT15-201ENST00000420162 ITGB4P16144 1822 aa19.87■□□□□ 0.77
CDRT15-201ENST00000420162 TOGARAM1Q9Y4F4 1720 aa19.87■□□□□ 0.77
CDRT15-201ENST00000420162 PTF1AQ7RTS3 328 aa19.86■□□□□ 0.77
CDRT15-201ENST00000420162 TRIM35Q9UPQ4 493 aa19.86■□□□□ 0.77
CDRT15-201ENST00000420162 VIRMAQ69YN4 1812 aaKnown RBP19.86■□□□□ 0.77
CDRT15-201ENST00000420162 APBA3O96018 575 aa19.85■□□□□ 0.77
CDRT15-201ENST00000420162 DCTN1Q14203 1278 aa19.85■□□□□ 0.77
CDRT15-201ENST00000420162 CCDC27Q2M243 656 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 368.1 ms