RNA–Protein interactions for RNA: ENST00000420009.5

TNFAIP3-202, Transcript of TNF alpha induced protein 3, humanhuman

TSL 3

Gene TNFAIP3, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-202ENST00000420009 SENP3-EIF4A1A0A087X0R7 540 aa14.58□□□□□ -0.08
TNFAIP3-202ENST00000420009 SLC16A10Q8TF71 515 aa14.58□□□□□ -0.08
TNFAIP3-202ENST00000420009 SIN3AQ96ST3 1273 aa14.58□□□□□ -0.08
TNFAIP3-202ENST00000420009 TUBGCP6Q96RT7 1819 aa14.57□□□□□ -0.08
TNFAIP3-202ENST00000420009 PNPLA7Q6ZV29 1317 aa14.57□□□□□ -0.08
TNFAIP3-202ENST00000420009 GPR162Q16538 588 aa14.56□□□□□ -0.08
TNFAIP3-202ENST00000420009 A0A1W2PP64 1363 aa14.56□□□□□ -0.08
TNFAIP3-202ENST00000420009 NSD2O96028 1365 aa14.56□□□□□ -0.08
TNFAIP3-202ENST00000420009 DOT1LQ8TEK3 1739 aa14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 CHRDL2Q6WN34 429 aa14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 HDGFL2Q7Z4V5 671 aaPredicted RBP14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 ANKRD36BQ8N2N9 1353 aa14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 LY75O60449 1722 aa14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 SHANK3Q9BYB0 1731 aa14.55□□□□□ -0.08
TNFAIP3-202ENST00000420009 POLD1P28340 1107 aa14.54□□□□□ -0.08
TNFAIP3-202ENST00000420009 IP6K1Q92551 441 aa14.54□□□□□ -0.08
TNFAIP3-202ENST00000420009 SLC12A5Q9H2X9 1139 aa14.54□□□□□ -0.08
TNFAIP3-202ENST00000420009 DDX54Q8TDD1 881 aaKnown RBP14.53□□□□□ -0.08
TNFAIP3-202ENST00000420009 TMC1Q8TDI8 760 aa14.53□□□□□ -0.08
TNFAIP3-202ENST00000420009 NLGN2Q8NFZ4 835 aa14.52□□□□□ -0.09
TNFAIP3-202ENST00000420009 TERF2IPQ9NYB0 399 aa14.52□□□□□ -0.09
TNFAIP3-202ENST00000420009 TFCP2L1Q9NZI6 479 aa14.52□□□□□ -0.09
TNFAIP3-202ENST00000420009 MEGF6O75095 1541 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 GIGYF1O75420 1035 aaPredicted RBP14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 PRIM1P49642 420 aaKnown RBP14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 KCNQ4P56696 695 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 NEUROD1Q13562 356 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 KLHL34Q8N239 644 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 PUS7Q96PZ0 661 aaKnown RBP14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 CARD11Q9BXL7 1154 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 CEP350Q5VT06 3117 aa14.51□□□□□ -0.09
TNFAIP3-202ENST00000420009 MAP3K19Q56UN5 1328 aa14.5□□□□□ -0.09
TNFAIP3-202ENST00000420009 SYTL4Q96C24 671 aaPredicted RBP14.49□□□□□ -0.09
TNFAIP3-202ENST00000420009 LTV1Q96GA3 475 aaPredicted RBP14.49□□□□□ -0.09
TNFAIP3-202ENST00000420009 KAT6BQ8WYB5 2073 aa14.49□□□□□ -0.09
TNFAIP3-202ENST00000420009 MYCNP04198 464 aaPredicted RBP14.48□□□□□ -0.09
TNFAIP3-202ENST00000420009 YBX3P16989 372 aaKnown RBP eCLIP14.48□□□□□ -0.09
TNFAIP3-202ENST00000420009 HOXC9P31274 260 aa14.48□□□□□ -0.09
TNFAIP3-202ENST00000420009 PELP1Q8IZL8 1130 aaKnown RBP14.48□□□□□ -0.09
TNFAIP3-202ENST00000420009 RTL1A6NKG5 1358 aa14.47□□□□□ -0.09
TNFAIP3-202ENST00000420009 ZCRB1Q8TBF4 217 aaKnown RBP14.47□□□□□ -0.09
TNFAIP3-202ENST00000420009 CCNL1Q9UK58 526 aaPredicted RBP14.47□□□□□ -0.09
TNFAIP3-202ENST00000420009 RGPD2P0DJD1 1756 aa14.47□□□□□ -0.09
TNFAIP3-202ENST00000420009 POLA2Q14181 598 aa14.46□□□□□ -0.09
TNFAIP3-202ENST00000420009 COL23A1Q86Y22 540 aaPredicted RBP14.46□□□□□ -0.09
TNFAIP3-202ENST00000420009 USP47Q96K76 1375 aa14.46□□□□□ -0.1
TNFAIP3-202ENST00000420009 GRIN3BO60391 1043 aa14.45□□□□□ -0.1
TNFAIP3-202ENST00000420009 COG3Q96JB2 828 aa14.45□□□□□ -0.1
TNFAIP3-202ENST00000420009 TESK2Q96S53 571 aa14.45□□□□□ -0.1
TNFAIP3-202ENST00000420009 C5P01031 1676 aa14.45□□□□□ -0.1
TNFAIP3-202ENST00000420009 CGNL1Q0VF96 1302 aa14.43□□□□□ -0.1
TNFAIP3-202ENST00000420009 ATP10DQ9P241 1426 aa14.43□□□□□ -0.1
TNFAIP3-202ENST00000420009 FBLN1P23142 703 aa14.43□□□□□ -0.1
TNFAIP3-202ENST00000420009 AMPHP49418 695 aa14.43□□□□□ -0.1
TNFAIP3-202ENST00000420009 ADCY9O60503 1353 aa14.43□□□□□ -0.1
TNFAIP3-202ENST00000420009 MSL1Q68DK7 614 aa14.42□□□□□ -0.1
TNFAIP3-202ENST00000420009 IFFO2Q5TF58 517 aa14.41□□□□□ -0.1
TNFAIP3-202ENST00000420009 NBPF6Q5VWK0 638 aa14.41□□□□□ -0.1
TNFAIP3-202ENST00000420009 NBPF4Q96M43 638 aa14.41□□□□□ -0.1
TNFAIP3-202ENST00000420009 TOGARAM1Q9Y4F4 1720 aa14.41□□□□□ -0.1
TNFAIP3-202ENST00000420009 SMG6Q86US8 1419 aaKnown RBP14.41□□□□□ -0.1
TNFAIP3-202ENST00000420009 PALLDQ8WX93 1383 aa14.4□□□□□ -0.1
TNFAIP3-202ENST00000420009 CD2APQ9Y5K6 639 aa14.4□□□□□ -0.1
TNFAIP3-202ENST00000420009 TAF1LQ8IZX4 1826 aa14.4□□□□□ -0.1
TNFAIP3-202ENST00000420009 RRS1Q15050 365 aaKnown RBP14.39□□□□□ -0.11
TNFAIP3-202ENST00000420009 USHBP1Q8N6Y0 703 aa14.39□□□□□ -0.11
TNFAIP3-202ENST00000420009 RAPGEF4Q8WZA2 1011 aa14.39□□□□□ -0.11
TNFAIP3-202ENST00000420009 PCDH11XQ9BZA7 1347 aa14.39□□□□□ -0.11
TNFAIP3-202ENST00000420009 PCDH11YQ9BZA8 1340 aa14.39□□□□□ -0.11
TNFAIP3-202ENST00000420009 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
TNFAIP3-202ENST00000420009 INSRP06213 1382 aa14.38□□□□□ -0.11
TNFAIP3-202ENST00000420009 TONSLQ96HA7 1378 aa14.38□□□□□ -0.11
TNFAIP3-202ENST00000420009 ST20-MTHFSA0A0A6YYL1 179 aa14.38□□□□□ -0.11
TNFAIP3-202ENST00000420009 FLAD1Q8NFF5 587 aa14.38□□□□□ -0.11
TNFAIP3-202ENST00000420009 FYB1O15117 783 aa14.37□□□□□ -0.11
TNFAIP3-202ENST00000420009 HMGB2P26583 209 aaKnown RBP14.37□□□□□ -0.11
TNFAIP3-202ENST00000420009 PKD1L3Q7Z443 1732 aa14.37□□□□□ -0.11
TNFAIP3-202ENST00000420009 FLT4P35916 1363 aa14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 KIF24Q5T7B8 1368 aa14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 NCAPD2Q15021 1401 aa14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 SLC24A1O60721 1099 aa14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 TATP17735 454 aaPredicted RBP14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 AMIGO3Q86WK7 504 aa14.36□□□□□ -0.11
TNFAIP3-202ENST00000420009 CYP27B1O15528 508 aa14.35□□□□□ -0.11
TNFAIP3-202ENST00000420009 HSP90AB2PQ58FF8 381 aa14.35□□□□□ -0.11
TNFAIP3-202ENST00000420009 GGNBP2Q9H3C7 697 aa14.35□□□□□ -0.11
TNFAIP3-202ENST00000420009 GPBP1L1Q9HC44 474 aaPredicted RBP14.35□□□□□ -0.11
TNFAIP3-202ENST00000420009 UBR3Q6ZT12 1888 aa14.35□□□□□ -0.11
TNFAIP3-202ENST00000420009 NSD3Q9BZ95 1437 aa14.34□□□□□ -0.11
TNFAIP3-202ENST00000420009 MAP2P11137 1827 aaKnown RBP14.34□□□□□ -0.11
TNFAIP3-202ENST00000420009 KIF20BQ96Q89 1820 aa14.34□□□□□ -0.11
TNFAIP3-202ENST00000420009 CICQ96RK0 1608 aaPredicted RBP14.33□□□□□ -0.11
TNFAIP3-202ENST00000420009 MPRIPQ6WCQ1 1025 aa14.33□□□□□ -0.12
TNFAIP3-202ENST00000420009 SMARCC1Q92922 1105 aaPredicted RBP14.33□□□□□ -0.12
TNFAIP3-202ENST00000420009 AK7Q96M32 723 aa14.33□□□□□ -0.12
TNFAIP3-202ENST00000420009 ITGB4P16144 1822 aa14.33□□□□□ -0.12
TNFAIP3-202ENST00000420009 IGSF1Q8N6C5 1336 aa14.33□□□□□ -0.12
TNFAIP3-202ENST00000420009 HSPA6P17066 643 aa14.32□□□□□ -0.12
TNFAIP3-202ENST00000420009 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.31□□□□□ -0.12
TNFAIP3-202ENST00000420009 PIGBQ92521 554 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms