RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 COL24A1Q17RW2 1714 aa24.1■■□□□ 1.45
PTCD1-202ENST00000419981 DCAF8L1A6NGE4 600 aa24.09■■□□□ 1.45
PTCD1-202ENST00000419981 PTGER2P43116 358 aa24.09■■□□□ 1.45
PTCD1-202ENST00000419981 PKD1L3Q7Z443 1732 aa24.08■■□□□ 1.45
PTCD1-202ENST00000419981 ZCRB1Q8TBF4 217 aaKnown RBP24.08■■□□□ 1.45
PTCD1-202ENST00000419981 MTFR1LQ9H019 292 aa24.08■■□□□ 1.45
PTCD1-202ENST00000419981 NSD3Q9BZ95 1437 aa24.08■■□□□ 1.44
PTCD1-202ENST00000419981 CLSPNQ9HAW4 1339 aa24.08■■□□□ 1.44
PTCD1-202ENST00000419981 TAF1LQ8IZX4 1826 aa24.07■■□□□ 1.44
PTCD1-202ENST00000419981 FLT4P35916 1363 aa24.07■■□□□ 1.44
PTCD1-202ENST00000419981 INSRP06213 1382 aa24.06■■□□□ 1.44
PTCD1-202ENST00000419981 KIF24Q5T7B8 1368 aa24.06■■□□□ 1.44
PTCD1-202ENST00000419981 NBPF6Q5VWK0 638 aa24.06■■□□□ 1.44
PTCD1-202ENST00000419981 SYTL4Q96C24 671 aaPredicted RBP24.06■■□□□ 1.44
PTCD1-202ENST00000419981 NBPF4Q96M43 638 aa24.06■■□□□ 1.44
PTCD1-202ENST00000419981 LRRC4BQ9NT99 713 aa24.06■■□□□ 1.44
PTCD1-202ENST00000419981 C5P01031 1676 aa24.05■■□□□ 1.44
PTCD1-202ENST00000419981 ZNF827Q17R98 1081 aa24.05■■□□□ 1.44
PTCD1-202ENST00000419981 SLC27A3Q5K4L6 730 aa24.05■■□□□ 1.44
PTCD1-202ENST00000419981 USHBP1Q8N6Y0 703 aa24.05■■□□□ 1.44
PTCD1-202ENST00000419981 CGNL1Q0VF96 1302 aa24.05■■□□□ 1.44
PTCD1-202ENST00000419981 PRIM1P49642 420 aaKnown RBP24.04■■□□□ 1.44
PTCD1-202ENST00000419981 TOGARAM1Q9Y4F4 1720 aa24.04■■□□□ 1.44
PTCD1-202ENST00000419981 NSD2O96028 1365 aa24.03■■□□□ 1.44
PTCD1-202ENST00000419981 RAPGEF4Q8WZA2 1011 aa24.03■■□□□ 1.44
PTCD1-202ENST00000419981 YY1P25490 414 aa24.02■■□□□ 1.44
PTCD1-202ENST00000419981 CARD14Q9BXL6 1004 aa24.02■■□□□ 1.44
PTCD1-202ENST00000419981 PCGF6Q9BYE7 350 aa24.02■■□□□ 1.44
PTCD1-202ENST00000419981 TATP17735 454 aaPredicted RBP24.01■■□□□ 1.43
PTCD1-202ENST00000419981 HSP90AB2PQ58FF8 381 aa24.01■■□□□ 1.43
PTCD1-202ENST00000419981 SGIP1Q9BQI5 828 aa24.01■■□□□ 1.43
PTCD1-202ENST00000419981 AKT1S1Q96B36 256 aa24■■□□□ 1.43
PTCD1-202ENST00000419981 FHDC1Q9C0D6 1143 aaPredicted RBP23.99■■□□□ 1.43
PTCD1-202ENST00000419981 PCDH11XQ9BZA7 1347 aa23.97■■□□□ 1.43
PTCD1-202ENST00000419981 PCDH11YQ9BZA8 1340 aa23.97■■□□□ 1.43
PTCD1-202ENST00000419981 EMILIN1Q9Y6C2 1016 aa23.97■■□□□ 1.43
PTCD1-202ENST00000419981 KCNQ4P56696 695 aa23.96■■□□□ 1.43
PTCD1-202ENST00000419981 SYT17Q9BSW7 474 aa23.96■■□□□ 1.43
PTCD1-202ENST00000419981 ARXQ96QS3 562 aa23.95■■□□□ 1.42
PTCD1-202ENST00000419981 NCAPD2Q15021 1401 aa23.94■■□□□ 1.42
PTCD1-202ENST00000419981 PNPLA7Q6ZV29 1317 aa23.94■■□□□ 1.42
PTCD1-202ENST00000419981 SLC16A10Q8TF71 515 aa23.94■■□□□ 1.42
PTCD1-202ENST00000419981 TFCP2L1Q9NZI6 479 aa23.94■■□□□ 1.42
PTCD1-202ENST00000419981 CCNL1Q9UK58 526 aaPredicted RBP23.94■■□□□ 1.42
PTCD1-202ENST00000419981 PPM1GO15355 546 aaPredicted RBP23.93■■□□□ 1.42
PTCD1-202ENST00000419981 POLR3GLQ9BT43 218 aa23.93■■□□□ 1.42
PTCD1-202ENST00000419981 MAP3K5Q99683 1374 aa23.92■■□□□ 1.42
PTCD1-202ENST00000419981 UBR3Q6ZT12 1888 aa23.9■■□□□ 1.42
PTCD1-202ENST00000419981 C4BP0C0L5 1744 aa23.9■■□□□ 1.42
PTCD1-202ENST00000419981 WASHC2AQ641Q2 1341 aa23.89■■□□□ 1.42
PTCD1-202ENST00000419981 CYP27B1O15528 508 aa23.88■■□□□ 1.41
PTCD1-202ENST00000419981 POLD1P28340 1107 aa23.88■■□□□ 1.41
PTCD1-202ENST00000419981 EIF4G2P78344 907 aaKnown RBP eCLIP23.87■■□□□ 1.41
PTCD1-202ENST00000419981 PALLDQ8WX93 1383 aa23.86■■□□□ 1.41
PTCD1-202ENST00000419981 MPRIPQ6WCQ1 1025 aa23.85■■□□□ 1.41
PTCD1-202ENST00000419981 KLHL34Q8N239 644 aa23.84■■□□□ 1.41
PTCD1-202ENST00000419981 POLKQ9UBT6 870 aa23.84■■□□□ 1.41
PTCD1-202ENST00000419981 SPG7Q9UQ90 795 aa23.84■■□□□ 1.41
PTCD1-202ENST00000419981 HSPA5P11021 654 aaKnown RBP23.83■■□□□ 1.41
PTCD1-202ENST00000419981 HMGB2P26583 209 aaKnown RBP23.83■■□□□ 1.41
PTCD1-202ENST00000419981 EYA1Q99502 592 aa23.83■■□□□ 1.41
PTCD1-202ENST00000419981 MSH5O43196 834 aa23.82■■□□□ 1.4
PTCD1-202ENST00000419981 TNNT2P45379 298 aaPredicted RBP23.81■■□□□ 1.4
PTCD1-202ENST00000419981 CCER1Q8TC90 406 aaPredicted RBP23.81■■□□□ 1.4
PTCD1-202ENST00000419981 VIRMAQ69YN4 1812 aaKnown RBP23.81■■□□□ 1.4
PTCD1-202ENST00000419981 NKX1-1Q15270 411 aaPredicted RBP23.8■■□□□ 1.4
PTCD1-202ENST00000419981 COL23A1Q86Y22 540 aaPredicted RBP23.8■■□□□ 1.4
PTCD1-202ENST00000419981 SMARCC1Q92922 1105 aaPredicted RBP23.8■■□□□ 1.4
PTCD1-202ENST00000419981 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.79■■□□□ 1.4
PTCD1-202ENST00000419981 EIF4A2Q14240 407 aaKnown RBP23.78■■□□□ 1.4
PTCD1-202ENST00000419981 PANK3Q9H999 370 aa23.77■■□□□ 1.4
PTCD1-202ENST00000419981 PLEKHG2Q9H7P9 1386 aa23.77■■□□□ 1.4
PTCD1-202ENST00000419981 GPR162Q16538 588 aa23.76■■□□□ 1.39
PTCD1-202ENST00000419981 FLAD1Q8NFF5 587 aa23.76■■□□□ 1.39
PTCD1-202ENST00000419981 PIGBQ92521 554 aa23.76■■□□□ 1.39
PTCD1-202ENST00000419981 ZNF831Q5JPB2 1677 aa23.76■■□□□ 1.39
PTCD1-202ENST00000419981 IFNL2Q8IZJ0 200 aa23.75■■□□□ 1.39
PTCD1-202ENST00000419981 UTRNP46939 3433 aa23.74■■□□□ 1.39
PTCD1-202ENST00000419981 COL5A3P25940 1745 aaPredicted RBP23.74■■□□□ 1.39
PTCD1-202ENST00000419981 PHKG2P15735 406 aa23.74■■□□□ 1.39
PTCD1-202ENST00000419981 MSL1Q68DK7 614 aa23.74■■□□□ 1.39
PTCD1-202ENST00000419981 TMOD3Q9NYL9 352 aa23.74■■□□□ 1.39
PTCD1-202ENST00000419981 AK7Q96M32 723 aa23.73■■□□□ 1.39
PTCD1-202ENST00000419981 IGSF1Q8N6C5 1336 aa23.73■■□□□ 1.39
PTCD1-202ENST00000419981 ZNF784Q8NCA9 323 aaPredicted RBP23.72■■□□□ 1.39
PTCD1-202ENST00000419981 NLGN2Q8NFZ4 835 aa23.72■■□□□ 1.39
PTCD1-202ENST00000419981 SCN11AQ9UI33 1791 aa23.72■■□□□ 1.39
PTCD1-202ENST00000419981 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
PTCD1-202ENST00000419981 LOC102724428A0A0B4J2F2 783 aa23.7■■□□□ 1.38
PTCD1-202ENST00000419981 SIK1P57059 783 aa23.7■■□□□ 1.38
PTCD1-202ENST00000419981 MORC1Q86VD1 984 aa23.68■■□□□ 1.38
PTCD1-202ENST00000419981 ASAP1Q9ULH1 1129 aa23.67■■□□□ 1.38
PTCD1-202ENST00000419981 PHF14O94880 888 aa23.66■■□□□ 1.38
PTCD1-202ENST00000419981 LINC00116Q8NCU8 138 aa23.66■■□□□ 1.38
PTCD1-202ENST00000419981 KNSTRNQ9Y448 316 aa23.66■■□□□ 1.38
PTCD1-202ENST00000419981 C4AP0C0L4 1744 aa23.65■■□□□ 1.38
PTCD1-202ENST00000419981 SSFA2P28290 1259 aa23.65■■□□□ 1.38
PTCD1-202ENST00000419981 AMIGO3Q86WK7 504 aa23.65■■□□□ 1.38
PTCD1-202ENST00000419981 KIF13BQ9NQT8 1826 aa23.65■■□□□ 1.38
PTCD1-202ENST00000419981 MYH14Q7Z406 1995 aaKnown RBP23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms