RNA–Protein interactions for RNA: ENST00000419774.5

PCGF3-203, Transcript of polycomb group ring finger 3, humanhuman

TSL 5

Gene PCGF3, Length 589 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-203ENST00000419774 PRIM1P49642 420 aaKnown RBP23.8■■□□□ 1.4
PCGF3-203ENST00000419774 SLC16A10Q8TF71 515 aa23.8■■□□□ 1.4
PCGF3-203ENST00000419774 SLC24A1O60721 1099 aa23.78■■□□□ 1.4
PCGF3-203ENST00000419774 SYTL4Q96C24 671 aaPredicted RBP23.78■■□□□ 1.4
PCGF3-203ENST00000419774 PNPLA7Q6ZV29 1317 aa23.78■■□□□ 1.4
PCGF3-203ENST00000419774 KCNQ4P56696 695 aa23.77■■□□□ 1.4
PCGF3-203ENST00000419774 ZCRB1Q8TBF4 217 aaKnown RBP23.77■■□□□ 1.4
PCGF3-203ENST00000419774 MEGF6O75095 1541 aa23.77■■□□□ 1.4
PCGF3-203ENST00000419774 NSD2O96028 1365 aa23.77■■□□□ 1.4
PCGF3-203ENST00000419774 RTL1A6NKG5 1358 aa23.76■■□□□ 1.39
PCGF3-203ENST00000419774 TFCP2L1Q9NZI6 479 aa23.75■■□□□ 1.39
PCGF3-203ENST00000419774 POLD1P28340 1107 aa23.74■■□□□ 1.39
PCGF3-203ENST00000419774 RRS1Q15050 365 aaKnown RBP23.72■■□□□ 1.39
PCGF3-203ENST00000419774 NBPF6Q5VWK0 638 aa23.72■■□□□ 1.39
PCGF3-203ENST00000419774 NBPF4Q96M43 638 aa23.72■■□□□ 1.39
PCGF3-203ENST00000419774 FYB1O15117 783 aa23.71■■□□□ 1.39
PCGF3-203ENST00000419774 GPR162Q16538 588 aa23.71■■□□□ 1.39
PCGF3-203ENST00000419774 CGNL1Q0VF96 1302 aa23.7■■□□□ 1.38
PCGF3-203ENST00000419774 KLHL34Q8N239 644 aa23.7■■□□□ 1.38
PCGF3-203ENST00000419774 GGNBP2Q9H3C7 697 aa23.7■■□□□ 1.38
PCGF3-203ENST00000419774 CCNL1Q9UK58 526 aaPredicted RBP23.7■■□□□ 1.38
PCGF3-203ENST00000419774 USHBP1Q8N6Y0 703 aa23.68■■□□□ 1.38
PCGF3-203ENST00000419774 KIF20BQ96Q89 1820 aa23.68■■□□□ 1.38
PCGF3-203ENST00000419774 TMF1P82094 1093 aa23.67■■□□□ 1.38
PCGF3-203ENST00000419774 RAPGEF4Q8WZA2 1011 aa23.67■■□□□ 1.38
PCGF3-203ENST00000419774 SMG6Q86US8 1419 aaKnown RBP23.67■■□□□ 1.38
PCGF3-203ENST00000419774 USP47Q96K76 1375 aa23.66■■□□□ 1.38
PCGF3-203ENST00000419774 INSRP06213 1382 aa23.65■■□□□ 1.38
PCGF3-203ENST00000419774 TATP17735 454 aaPredicted RBP23.64■■□□□ 1.37
PCGF3-203ENST00000419774 HSP90AB2PQ58FF8 381 aa23.64■■□□□ 1.37
PCGF3-203ENST00000419774 COL23A1Q86Y22 540 aaPredicted RBP23.64■■□□□ 1.37
PCGF3-203ENST00000419774 NLGN2Q8NFZ4 835 aa23.64■■□□□ 1.37
PCGF3-203ENST00000419774 GOLGB1Q14789 3259 aaKnown RBP23.64■■□□□ 1.37
PCGF3-203ENST00000419774 C5P01031 1676 aa23.64■■□□□ 1.37
PCGF3-203ENST00000419774 TAF1LQ8IZX4 1826 aa23.63■■□□□ 1.37
PCGF3-203ENST00000419774 PELP1Q8IZL8 1130 aaKnown RBP23.62■■□□□ 1.37
PCGF3-203ENST00000419774 PCDH11XQ9BZA7 1347 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 PCDH11YQ9BZA8 1340 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 MSH5O43196 834 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 FLT4P35916 1363 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 KIF24Q5T7B8 1368 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 ITGB4P16144 1822 aa23.61■■□□□ 1.37
PCGF3-203ENST00000419774 C1QTNF8P60827 252 aa23.6■■□□□ 1.37
PCGF3-203ENST00000419774 CDCA8Q53HL2 280 aa23.59■■□□□ 1.37
PCGF3-203ENST00000419774 TOGARAM1Q9Y4F4 1720 aa23.58■■□□□ 1.37
PCGF3-203ENST00000419774 PALLDQ8WX93 1383 aa23.57■■□□□ 1.36
PCGF3-203ENST00000419774 PKD1L3Q7Z443 1732 aa23.57■■□□□ 1.36
PCGF3-203ENST00000419774 CYP27B1O15528 508 aa23.57■■□□□ 1.36
PCGF3-203ENST00000419774 MSL1Q68DK7 614 aa23.57■■□□□ 1.36
PCGF3-203ENST00000419774 SENP3-EIF4A1A0A087X0R7 540 aa23.56■■□□□ 1.36
PCGF3-203ENST00000419774 HMGB2P26583 209 aaKnown RBP23.56■■□□□ 1.36
PCGF3-203ENST00000419774 MPRIPQ6WCQ1 1025 aa23.56■■□□□ 1.36
PCGF3-203ENST00000419774 CARD14Q9BXL6 1004 aa23.56■■□□□ 1.36
PCGF3-203ENST00000419774 YBX3P16989 372 aaKnown RBP eCLIP23.55■■□□□ 1.36
PCGF3-203ENST00000419774 GRIN3BO60391 1043 aa23.54■■□□□ 1.36
PCGF3-203ENST00000419774 FLAD1Q8NFF5 587 aa23.54■■□□□ 1.36
PCGF3-203ENST00000419774 EMILIN1Q9Y6C2 1016 aa23.53■■□□□ 1.36
PCGF3-203ENST00000419774 C4BP0C0L5 1744 aa23.53■■□□□ 1.36
PCGF3-203ENST00000419774 ANKRD26Q9UPS8 1709 aa23.53■■□□□ 1.36
PCGF3-203ENST00000419774 MAP2P11137 1827 aaKnown RBP23.52■■□□□ 1.36
PCGF3-203ENST00000419774 NCAPD2Q15021 1401 aa23.52■■□□□ 1.36
PCGF3-203ENST00000419774 NSD3Q9BZ95 1437 aa23.52■■□□□ 1.36
PCGF3-203ENST00000419774 SMARCC1Q92922 1105 aaPredicted RBP23.52■■□□□ 1.36
PCGF3-203ENST00000419774 UBR3Q6ZT12 1888 aa23.51■■□□□ 1.35
PCGF3-203ENST00000419774 GIGYF1O75420 1035 aaPredicted RBP23.51■■□□□ 1.35
PCGF3-203ENST00000419774 CD2APQ9Y5K6 639 aa23.5■■□□□ 1.35
PCGF3-203ENST00000419774 NKX1-1Q15270 411 aaPredicted RBP23.49■■□□□ 1.35
PCGF3-203ENST00000419774 PIGBQ92521 554 aa23.49■■□□□ 1.35
PCGF3-203ENST00000419774 PPM1GO15355 546 aaPredicted RBP23.47■■□□□ 1.35
PCGF3-203ENST00000419774 AMIGO3Q86WK7 504 aa23.47■■□□□ 1.35
PCGF3-203ENST00000419774 AK7Q96M32 723 aa23.47■■□□□ 1.35
PCGF3-203ENST00000419774 WASHC2AQ641Q2 1341 aa23.46■■□□□ 1.35
PCGF3-203ENST00000419774 SPG7Q9UQ90 795 aa23.46■■□□□ 1.35
PCGF3-203ENST00000419774 EYA1Q99502 592 aa23.44■■□□□ 1.34
PCGF3-203ENST00000419774 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.44■■□□□ 1.34
PCGF3-203ENST00000419774 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.42■■□□□ 1.34
PCGF3-203ENST00000419774 LOC102724428A0A0B4J2F2 783 aa23.42■■□□□ 1.34
PCGF3-203ENST00000419774 PHF14O94880 888 aa23.42■■□□□ 1.34
PCGF3-203ENST00000419774 SIK1P57059 783 aa23.42■■□□□ 1.34
PCGF3-203ENST00000419774 SMIM5Q71RC9 77 aa23.42■■□□□ 1.34
PCGF3-203ENST00000419774 TRIM26Q12899 539 aaPredicted RBP23.41■■□□□ 1.34
PCGF3-203ENST00000419774 ATP10DQ9P241 1426 aa23.41■■□□□ 1.34
PCGF3-203ENST00000419774 SSFA2P28290 1259 aa23.4■■□□□ 1.34
PCGF3-203ENST00000419774 LINC00116Q8NCU8 138 aa23.4■■□□□ 1.34
PCGF3-203ENST00000419774 TMOD3Q9NYL9 352 aa23.4■■□□□ 1.34
PCGF3-203ENST00000419774 POLKQ9UBT6 870 aa23.4■■□□□ 1.34
PCGF3-203ENST00000419774 CEP350Q5VT06 3117 aa23.39■■□□□ 1.34
PCGF3-203ENST00000419774 ASAP1Q9ULH1 1129 aa23.39■■□□□ 1.33
PCGF3-203ENST00000419774 PHKG2P15735 406 aa23.38■■□□□ 1.33
PCGF3-203ENST00000419774 IFNL2Q8IZJ0 200 aa23.38■■□□□ 1.33
PCGF3-203ENST00000419774 ITPK1Q13572 414 aa23.37■■□□□ 1.33
PCGF3-203ENST00000419774 TIMELESSQ9UNS1 1208 aa23.37■■□□□ 1.33
PCGF3-203ENST00000419774 IGSF1Q8N6C5 1336 aa23.36■■□□□ 1.33
PCGF3-203ENST00000419774 ADCY9O60503 1353 aa23.36■■□□□ 1.33
PCGF3-203ENST00000419774 GNPATO15228 680 aa23.34■■□□□ 1.33
PCGF3-203ENST00000419774 ATP6V1AP38606 617 aa23.34■■□□□ 1.33
PCGF3-203ENST00000419774 EIF4A2Q14240 407 aaKnown RBP23.34■■□□□ 1.33
PCGF3-203ENST00000419774 ATG3Q9NT62 314 aa23.34■■□□□ 1.33
PCGF3-203ENST00000419774 PLEKHG2Q9H7P9 1386 aa23.33■■□□□ 1.33
PCGF3-203ENST00000419774 TNNT2P45379 298 aaPredicted RBP23.32■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 166.1 ms