RNA–Protein interactions for RNA: ENST00000419671.1

COL12A1-204, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 5

Gene COL12A1, Length 1,914 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-204ENST00000419671 DCTN1Q14203 1278 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 PKNOX2Q96KN3 472 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 IFT57Q9NWB7 429 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 RBM19Q9Y4C8 960 aaKnown RBP10.48□□□□□ -0.73
COL12A1-204ENST00000419671 KDM2BQ8NHM5 1336 aa10.48□□□□□ -0.73
COL12A1-204ENST00000419671 LRRC37A3O60309 1634 aa10.47□□□□□ -0.73
COL12A1-204ENST00000419671 RLBP1P12271 317 aa10.47□□□□□ -0.73
COL12A1-204ENST00000419671 CANXP27824 592 aaKnown RBP10.47□□□□□ -0.73
COL12A1-204ENST00000419671 CALD1Q05682 793 aaKnown RBP10.47□□□□□ -0.73
COL12A1-204ENST00000419671 CFAP44Q96MT7 982 aa10.47□□□□□ -0.73
COL12A1-204ENST00000419671 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.47□□□□□ -0.73
COL12A1-204ENST00000419671 LAS1LQ9Y4W2 734 aaKnown RBP10.47□□□□□ -0.73
COL12A1-204ENST00000419671 CRYBG1Q9Y4K1 1723 aa10.47□□□□□ -0.73
COL12A1-204ENST00000419671 SSH1Q8WYL5 1049 aa10.46□□□□□ -0.73
COL12A1-204ENST00000419671 COG6Q9Y2V7 657 aa10.46□□□□□ -0.73
COL12A1-204ENST00000419671 GNAI1P63096 354 aa10.46□□□□□ -0.74
COL12A1-204ENST00000419671 POLA2Q14181 598 aa10.46□□□□□ -0.74
COL12A1-204ENST00000419671 MBIPQ9NS73 344 aa10.46□□□□□ -0.74
COL12A1-204ENST00000419671 SMC4Q9NTJ3 1288 aa10.46□□□□□ -0.74
COL12A1-204ENST00000419671 MED1Q15648 1581 aaPredicted RBP10.46□□□□□ -0.74
COL12A1-204ENST00000419671 CAMTA1Q9Y6Y1 1673 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 USP19O94966 1318 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 ECM2O94769 699 aaPredicted RBP10.45□□□□□ -0.74
COL12A1-204ENST00000419671 ATF3P18847 181 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 MTHFSDQ2M296 383 aaKnown RBP10.45□□□□□ -0.74
COL12A1-204ENST00000419671 KRT28Q7Z3Y7 464 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 TSPYL6Q8N831 410 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 KCNH5Q8NCM2 988 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 IP6K1Q92551 441 aa10.45□□□□□ -0.74
COL12A1-204ENST00000419671 CRB1P82279 1406 aa10.44□□□□□ -0.74
COL12A1-204ENST00000419671 VAMP4O75379 141 aa10.44□□□□□ -0.74
COL12A1-204ENST00000419671 MCM10Q7L590 875 aa10.44□□□□□ -0.74
COL12A1-204ENST00000419671 CLUAP1Q96AJ1 413 aa10.44□□□□□ -0.74
COL12A1-204ENST00000419671 GCP02774 474 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 TRIM27P14373 513 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 ALDH1L2Q3SY69 923 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 ZKSCAN2Q63HK3 967 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 CENPQQ7L2Z9 268 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-204ENST00000419671 LTV1Q96GA3 475 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-204ENST00000419671 COL18A1P39060 1754 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 LMO7Q8WWI1 1683 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 BRPF1P55201 1214 aaPredicted RBP10.43□□□□□ -0.74
COL12A1-204ENST00000419671 SKAP1Q86WV1 359 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 C8orf58Q8NAV2 365 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 ZNF428Q96B54 188 aa10.43□□□□□ -0.74
COL12A1-204ENST00000419671 NOB1Q9ULX3 412 aaKnown RBP10.43□□□□□ -0.74
COL12A1-204ENST00000419671 MSH6P52701 1360 aa10.42□□□□□ -0.74
COL12A1-204ENST00000419671 PXDNQ92626 1479 aa10.42□□□□□ -0.74
COL12A1-204ENST00000419671 MVPQ14764 893 aaKnown RBP10.42□□□□□ -0.74
COL12A1-204ENST00000419671 ATF7IPQ6VMQ6 1270 aa10.42□□□□□ -0.74
COL12A1-204ENST00000419671 CADPS2Q86UW7 1296 aa10.42□□□□□ -0.74
COL12A1-204ENST00000419671 ARHGEF25Q86VW2 580 aa10.42□□□□□ -0.74
COL12A1-204ENST00000419671 DZIP1LQ8IYY4 767 aaKnown RBP10.42□□□□□ -0.74
COL12A1-204ENST00000419671 DDX17Q92841 729 aaKnown RBP10.42□□□□□ -0.74
COL12A1-204ENST00000419671 KIF16BQ96L93 1317 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 CHL1O00533 1208 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 LMOD2Q6P5Q4 547 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 NCAPD2Q15021 1401 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 ELL2O00472 640 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-204ENST00000419671 IGHDP01880 384 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 TWISTNBQ3B726 338 aaPredicted RBP10.41□□□□□ -0.74
COL12A1-204ENST00000419671 NBPF6Q5VWK0 638 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 USHBP1Q8N6Y0 703 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 GAS2L2Q8NHY3 880 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 NBPF4Q96M43 638 aa10.41□□□□□ -0.74
COL12A1-204ENST00000419671 CACNA1FO60840 1977 aa10.4□□□□□ -0.74
COL12A1-204ENST00000419671 ZNF335Q9H4Z2 1342 aaPredicted RBP10.4□□□□□ -0.74
COL12A1-204ENST00000419671 FTSJ3Q8IY81 847 aaKnown RBP10.4□□□□□ -0.74
COL12A1-204ENST00000419671 ZBTB7CA1YPR0 619 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 TCERG1O14776 1098 aaKnown RBP10.39□□□□□ -0.75
COL12A1-204ENST00000419671 AAMPQ13685 434 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 KRT24Q2M2I5 525 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 MRPL50Q8N5N7 158 aaKnown RBP10.39□□□□□ -0.75
COL12A1-204ENST00000419671 PCDHB15Q9Y5E8 787 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 NPHP3Q7Z494 1330 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 KDM3BQ7LBC6 1761 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 FAM208AQ9UK61 1670 aaKnown RBP10.39□□□□□ -0.75
COL12A1-204ENST00000419671 KIAA0232Q92628 1395 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 RGL2O15211 777 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 MS4A1P11836 297 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 LRRC59Q96AG4 307 aaKnown RBP10.39□□□□□ -0.75
COL12A1-204ENST00000419671 AXIN2Q9Y2T1 843 aa10.39□□□□□ -0.75
COL12A1-204ENST00000419671 TNS3Q68CZ2 1445 aa10.38□□□□□ -0.75
COL12A1-204ENST00000419671 MAP3K5Q99683 1374 aa10.38□□□□□ -0.75
COL12A1-204ENST00000419671 GNAT3A8MTJ3 354 aa10.38□□□□□ -0.75
COL12A1-204ENST00000419671 HTATSF1O43719 755 aaKnown RBP10.38□□□□□ -0.75
COL12A1-204ENST00000419671 TMEM57Q8N5G2 664 aa10.38□□□□□ -0.75
COL12A1-204ENST00000419671 RTF1Q92541 710 aaKnown RBP10.38□□□□□ -0.75
COL12A1-204ENST00000419671 ABCA3Q99758 1704 aa10.38□□□□□ -0.75
COL12A1-204ENST00000419671 IPO8O15397 1037 aaKnown RBP10.37□□□□□ -0.75
COL12A1-204ENST00000419671 MIS18AQ9NYP9 233 aa10.37□□□□□ -0.75
COL12A1-204ENST00000419671 SIPA1L3O60292 1781 aaPredicted RBP10.37□□□□□ -0.75
COL12A1-204ENST00000419671 ITPRIPQ8IWB1 547 aa10.37□□□□□ -0.75
COL12A1-204ENST00000419671 ARHGAP45Q92619 1136 aa10.37□□□□□ -0.75
COL12A1-204ENST00000419671 NHSL1Q5SYE7 1610 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 BRINP3Q76B58 766 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 IL17REQ8NFR9 667 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 ANKRD24Q8TF21 1146 aa10.36□□□□□ -0.75
COL12A1-204ENST00000419671 DDX19BQ9UMR2 479 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms