RNA–Protein interactions for RNA: ENST00000419650.1

GACAT1-201, gastric cancer associated transcript 1, humanhuman

TSL 4 BASIC

Gene GACAT1, Length 577 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GACAT1-201ENST00000419650 PSDA5PKW4 1024 aaPredicted RBP11.73□□□□□ -0.53
GACAT1-201ENST00000419650 PPM1GO15355 546 aaPredicted RBP11.73□□□□□ -0.53
GACAT1-201ENST00000419650 KIF24Q5T7B8 1368 aa11.73□□□□□ -0.53
GACAT1-201ENST00000419650 NBPF6Q5VWK0 638 aa11.73□□□□□ -0.53
GACAT1-201ENST00000419650 USHBP1Q8N6Y0 703 aa11.73□□□□□ -0.53
GACAT1-201ENST00000419650 NBPF4Q96M43 638 aa11.73□□□□□ -0.53
GACAT1-201ENST00000419650 BTAF1O14981 1849 aa11.72□□□□□ -0.53
GACAT1-201ENST00000419650 DOT1LQ8TEK3 1739 aa11.72□□□□□ -0.53
GACAT1-201ENST00000419650 TNNT2P45379 298 aaPredicted RBP11.72□□□□□ -0.53
GACAT1-201ENST00000419650 BCL11BQ9C0K0 894 aaPredicted RBP11.72□□□□□ -0.53
GACAT1-201ENST00000419650 NSD2O96028 1365 aa11.71□□□□□ -0.53
GACAT1-201ENST00000419650 KCNQ2O43526 872 aa11.7□□□□□ -0.54
GACAT1-201ENST00000419650 R3HDM1Q15032 1099 aaKnown RBP11.7□□□□□ -0.54
GACAT1-201ENST00000419650 DDX54Q8TDD1 881 aaKnown RBP11.7□□□□□ -0.54
GACAT1-201ENST00000419650 ACSBG1Q96GR2 724 aa11.7□□□□□ -0.54
GACAT1-201ENST00000419650 LRP5O75197 1615 aa11.7□□□□□ -0.54
GACAT1-201ENST00000419650 PKD1L3Q7Z443 1732 aa11.69□□□□□ -0.54
GACAT1-201ENST00000419650 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
GACAT1-201ENST00000419650 WASHC2AQ641Q2 1341 aa11.68□□□□□ -0.54
GACAT1-201ENST00000419650 PLSCR1O15162 318 aa11.68□□□□□ -0.54
GACAT1-201ENST00000419650 RAPGEF4Q8WZA2 1011 aa11.68□□□□□ -0.54
GACAT1-201ENST00000419650 KNSTRNQ9Y448 316 aa11.68□□□□□ -0.54
GACAT1-201ENST00000419650 NCAPD2Q15021 1401 aa11.68□□□□□ -0.54
GACAT1-201ENST00000419650 ZCRB1Q8TBF4 217 aaKnown RBP11.67□□□□□ -0.54
GACAT1-201ENST00000419650 TATP17735 454 aaPredicted RBP11.66□□□□□ -0.54
GACAT1-201ENST00000419650 MORC1Q86VD1 984 aa11.66□□□□□ -0.54
GACAT1-201ENST00000419650 TOGARAM1Q9Y4F4 1720 aa11.66□□□□□ -0.54
GACAT1-201ENST00000419650 AMER1Q5JTC6 1135 aaPredicted RBP11.65□□□□□ -0.54
GACAT1-201ENST00000419650 NBPF14Q5TI25 921 aa11.65□□□□□ -0.54
GACAT1-201ENST00000419650 PROM2Q8N271 834 aa11.65□□□□□ -0.54
GACAT1-201ENST00000419650 PAPPAQ13219 1627 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 PCDH11XQ9BZA7 1347 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 PCDH11YQ9BZA8 1340 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 EIF4A2Q14240 407 aaKnown RBP11.64□□□□□ -0.55
GACAT1-201ENST00000419650 TXNRD1Q16881 649 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 SYTL4Q96C24 671 aaPredicted RBP11.64□□□□□ -0.55
GACAT1-201ENST00000419650 EYA1Q99502 592 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 ANO8Q9HCE9 1232 aaPredicted RBP11.64□□□□□ -0.55
GACAT1-201ENST00000419650 ITGB4P16144 1822 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 CASZ1Q86V15 1759 aa11.64□□□□□ -0.55
GACAT1-201ENST00000419650 LY75O60449 1722 aa11.63□□□□□ -0.55
GACAT1-201ENST00000419650 PER1O15534 1290 aaPredicted RBP11.62□□□□□ -0.55
GACAT1-201ENST00000419650 PRIM1P49642 420 aaKnown RBP11.62□□□□□ -0.55
GACAT1-201ENST00000419650 CC2D1BQ5T0F9 858 aaKnown RBP11.62□□□□□ -0.55
GACAT1-201ENST00000419650 IGSF1Q8N6C5 1336 aa11.61□□□□□ -0.55
GACAT1-201ENST00000419650 CYP27B1O15528 508 aa11.61□□□□□ -0.55
GACAT1-201ENST00000419650 NPM3O75607 178 aaKnown RBP11.6□□□□□ -0.55
GACAT1-201ENST00000419650 CNGB1Q14028 1251 aaPredicted RBP11.6□□□□□ -0.55
GACAT1-201ENST00000419650 TUBGCP6Q96RT7 1819 aa11.6□□□□□ -0.55
GACAT1-201ENST00000419650 STK32BQ9NY57 414 aa11.59□□□□□ -0.55
GACAT1-201ENST00000419650 SPG7Q9UQ90 795 aa11.59□□□□□ -0.55
GACAT1-201ENST00000419650 NPC1L1Q9UHC9 1359 aa11.58□□□□□ -0.56
GACAT1-201ENST00000419650 MTHFSP49914 203 aa11.58□□□□□ -0.56
GACAT1-201ENST00000419650 KCNQ4P56696 695 aa11.58□□□□□ -0.56
GACAT1-201ENST00000419650 AEBP1Q8IUX7 1158 aa11.58□□□□□ -0.56
GACAT1-201ENST00000419650 PDGFDQ9GZP0 370 aaPredicted RBP11.58□□□□□ -0.56
GACAT1-201ENST00000419650 LRRC4BQ9NT99 713 aa11.58□□□□□ -0.56
GACAT1-201ENST00000419650 QSER1Q2KHR3 1735 aa11.57□□□□□ -0.56
GACAT1-201ENST00000419650 C5P01031 1676 aa11.57□□□□□ -0.56
GACAT1-201ENST00000419650 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
GACAT1-201ENST00000419650 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.57□□□□□ -0.56
GACAT1-201ENST00000419650 TAF1LQ8IZX4 1826 aa11.57□□□□□ -0.56
GACAT1-201ENST00000419650 PLEKHG2Q9H7P9 1386 aa11.56□□□□□ -0.56
GACAT1-201ENST00000419650 IL13P35225 146 aa11.56□□□□□ -0.56
GACAT1-201ENST00000419650 ZNF827Q17R98 1081 aa11.56□□□□□ -0.56
GACAT1-201ENST00000419650 MPRIPQ6WCQ1 1025 aa11.56□□□□□ -0.56
GACAT1-201ENST00000419650 SRCAPQ6ZRS2 3230 aa11.56□□□□□ -0.56
GACAT1-201ENST00000419650 PHKG2P15735 406 aa11.55□□□□□ -0.56
GACAT1-201ENST00000419650 NKX1-1Q15270 411 aaPredicted RBP11.55□□□□□ -0.56
GACAT1-201ENST00000419650 SLC27A3Q5K4L6 730 aa11.55□□□□□ -0.56
GACAT1-201ENST00000419650 SULT6B1Q6IMI4 303 aa11.55□□□□□ -0.56
GACAT1-201ENST00000419650 IFNL2Q8IZJ0 200 aa11.55□□□□□ -0.56
GACAT1-201ENST00000419650 SPON1Q9HCB6 807 aa11.55□□□□□ -0.56
GACAT1-201ENST00000419650 COL3A1P02461 1466 aaPredicted RBP11.55□□□□□ -0.56
GACAT1-201ENST00000419650 VIRMAQ69YN4 1812 aaKnown RBP11.55□□□□□ -0.56
GACAT1-201ENST00000419650 KDRP35968 1356 aa11.54□□□□□ -0.56
GACAT1-201ENST00000419650 PALLDQ8WX93 1383 aa11.54□□□□□ -0.56
GACAT1-201ENST00000419650 ZBTB7AO95365 584 aa11.54□□□□□ -0.56
GACAT1-201ENST00000419650 ZNF530Q6P9A1 599 aaPredicted RBP11.54□□□□□ -0.56
GACAT1-201ENST00000419650 CCNL1Q9UK58 526 aaPredicted RBP11.54□□□□□ -0.56
GACAT1-201ENST00000419650 PLEKHO1Q53GL0 409 aaPredicted RBP11.53□□□□□ -0.56
GACAT1-201ENST00000419650 PIGBQ92521 554 aa11.53□□□□□ -0.56
GACAT1-201ENST00000419650 SCN11AQ9UI33 1791 aa11.53□□□□□ -0.56
GACAT1-201ENST00000419650 KDM6AO15550 1401 aaPredicted RBP11.52□□□□□ -0.56
GACAT1-201ENST00000419650 C4BP0C0L5 1744 aa11.52□□□□□ -0.56
GACAT1-201ENST00000419650 DIAPH1O60610 1272 aaKnown RBP11.52□□□□□ -0.57
GACAT1-201ENST00000419650 HMOX1P09601 288 aa11.52□□□□□ -0.57
GACAT1-201ENST00000419650 AKT1S1Q96B36 256 aa11.52□□□□□ -0.57
GACAT1-201ENST00000419650 TMOD3Q9NYL9 352 aa11.52□□□□□ -0.57
GACAT1-201ENST00000419650 AMOTQ4VCS5 1084 aa11.51□□□□□ -0.57
GACAT1-201ENST00000419650 SMARCC1Q92922 1105 aaPredicted RBP11.51□□□□□ -0.57
GACAT1-201ENST00000419650 TFCP2L1Q9NZI6 479 aa11.51□□□□□ -0.57
GACAT1-201ENST00000419650 PPP1R1BQ9UD71 204 aaPredicted RBP11.51□□□□□ -0.57
GACAT1-201ENST00000419650 ATF5Q9Y2D1 282 aaPredicted RBP11.51□□□□□ -0.57
GACAT1-201ENST00000419650 C1orf141Q5JVX7 400 aa11.5□□□□□ -0.57
GACAT1-201ENST00000419650 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
GACAT1-201ENST00000419650 PNPLA7Q6ZV29 1317 aa11.5□□□□□ -0.57
GACAT1-201ENST00000419650 UBR3Q6ZT12 1888 aa11.5□□□□□ -0.57
GACAT1-201ENST00000419650 COL24A1Q17RW2 1714 aa11.49□□□□□ -0.57
GACAT1-201ENST00000419650 HSP90AB1P08238 724 aaKnown RBP11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms