RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 POLKQ9UBT6 870 aa17.41■□□□□ 0.38
HMGN1P4-201ENST00000419500 WASHC2AQ641Q2 1341 aa17.41■□□□□ 0.38
HMGN1P4-201ENST00000419500 PSDA5PKW4 1024 aaPredicted RBP17.4■□□□□ 0.38
HMGN1P4-201ENST00000419500 TATP17735 454 aaPredicted RBP17.4■□□□□ 0.38
HMGN1P4-201ENST00000419500 ACSBG1Q96GR2 724 aa17.4■□□□□ 0.38
HMGN1P4-201ENST00000419500 PLSCR1O15162 318 aa17.39■□□□□ 0.37
HMGN1P4-201ENST00000419500 PTF1AQ7RTS3 328 aa17.39■□□□□ 0.37
HMGN1P4-201ENST00000419500 ZCRB1Q8TBF4 217 aaKnown RBP17.39■□□□□ 0.37
HMGN1P4-201ENST00000419500 SHANK3Q9BYB0 1731 aa17.38■□□□□ 0.37
HMGN1P4-201ENST00000419500 R3HDM1Q15032 1099 aaKnown RBP17.38■□□□□ 0.37
HMGN1P4-201ENST00000419500 KCNQ2O43526 872 aa17.37■□□□□ 0.37
HMGN1P4-201ENST00000419500 NBPF14Q5TI25 921 aa17.37■□□□□ 0.37
HMGN1P4-201ENST00000419500 DOT1LQ8TEK3 1739 aa17.36■□□□□ 0.37
HMGN1P4-201ENST00000419500 AMER1Q5JTC6 1135 aaPredicted RBP17.35■□□□□ 0.37
HMGN1P4-201ENST00000419500 PCDH11XQ9BZA7 1347 aa17.35■□□□□ 0.37
HMGN1P4-201ENST00000419500 PCDH11YQ9BZA8 1340 aa17.35■□□□□ 0.37
HMGN1P4-201ENST00000419500 NCAPD2Q15021 1401 aa17.35■□□□□ 0.37
HMGN1P4-201ENST00000419500 BTAF1O14981 1849 aa17.35■□□□□ 0.37
HMGN1P4-201ENST00000419500 EIF4A2Q14240 407 aaKnown RBP17.34■□□□□ 0.37
HMGN1P4-201ENST00000419500 SYTL4Q96C24 671 aaPredicted RBP17.34■□□□□ 0.37
HMGN1P4-201ENST00000419500 PKD1L3Q7Z443 1732 aa17.33■□□□□ 0.37
HMGN1P4-201ENST00000419500 LRP5O75197 1615 aa17.32■□□□□ 0.36
HMGN1P4-201ENST00000419500 EYA1Q99502 592 aa17.32■□□□□ 0.36
HMGN1P4-201ENST00000419500 TXNRD1Q16881 649 aa17.31■□□□□ 0.36
HMGN1P4-201ENST00000419500 PER1O15534 1290 aaPredicted RBP17.3■□□□□ 0.36
HMGN1P4-201ENST00000419500 CC2D1BQ5T0F9 858 aaKnown RBP17.3■□□□□ 0.36
HMGN1P4-201ENST00000419500 SPG7Q9UQ90 795 aa17.3■□□□□ 0.36
HMGN1P4-201ENST00000419500 IGSF1Q8N6C5 1336 aa17.29■□□□□ 0.36
HMGN1P4-201ENST00000419500 PRIM1P49642 420 aaKnown RBP17.29■□□□□ 0.36
HMGN1P4-201ENST00000419500 KAT6BQ8WYB5 2073 aa17.28■□□□□ 0.36
HMGN1P4-201ENST00000419500 CNGB1Q14028 1251 aaPredicted RBP17.28■□□□□ 0.36
HMGN1P4-201ENST00000419500 PROM2Q8N271 834 aa17.28■□□□□ 0.36
HMGN1P4-201ENST00000419500 ANO8Q9HCE9 1232 aaPredicted RBP17.27■□□□□ 0.36
HMGN1P4-201ENST00000419500 PLEKHG2Q9H7P9 1386 aa17.27■□□□□ 0.35
HMGN1P4-201ENST00000419500 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
HMGN1P4-201ENST00000419500 CYP27B1O15528 508 aa17.26■□□□□ 0.35
HMGN1P4-201ENST00000419500 STK32BQ9NY57 414 aa17.26■□□□□ 0.35
HMGN1P4-201ENST00000419500 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.26■□□□□ 0.35
HMGN1P4-201ENST00000419500 MAPK8IP2Q13387 824 aaPredicted RBP17.25■□□□□ 0.35
HMGN1P4-201ENST00000419500 PAPPAQ13219 1627 aa17.25■□□□□ 0.35
HMGN1P4-201ENST00000419500 TOGARAM1Q9Y4F4 1720 aa17.24■□□□□ 0.35
HMGN1P4-201ENST00000419500 MTHFSP49914 203 aa17.24■□□□□ 0.35
HMGN1P4-201ENST00000419500 KCNA4P22459 653 aa17.23■□□□□ 0.35
HMGN1P4-201ENST00000419500 SLC27A3Q5K4L6 730 aa17.23■□□□□ 0.35
HMGN1P4-201ENST00000419500 SLC15A2Q16348 729 aa17.22■□□□□ 0.35
HMGN1P4-201ENST00000419500 IFNL2Q8IZJ0 200 aa17.22■□□□□ 0.35
HMGN1P4-201ENST00000419500 LY75O60449 1722 aa17.21■□□□□ 0.35
HMGN1P4-201ENST00000419500 PHKG2P15735 406 aa17.21■□□□□ 0.35
HMGN1P4-201ENST00000419500 IL13P35225 146 aa17.21■□□□□ 0.35
HMGN1P4-201ENST00000419500 SULT6B1Q6IMI4 303 aa17.21■□□□□ 0.35
HMGN1P4-201ENST00000419500 MPRIPQ6WCQ1 1025 aa17.21■□□□□ 0.35
HMGN1P4-201ENST00000419500 CASZ1Q86V15 1759 aa17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 ITGB4P16144 1822 aa17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 NKX1-1Q15270 411 aaPredicted RBP17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 PLEKHO1Q53GL0 409 aaPredicted RBP17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 AEBP1Q8IUX7 1158 aa17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 LRRC4BQ9NT99 713 aa17.2■□□□□ 0.34
HMGN1P4-201ENST00000419500 KDRP35968 1356 aa17.19■□□□□ 0.34
HMGN1P4-201ENST00000419500 AMOTQ4VCS5 1084 aa17.19■□□□□ 0.34
HMGN1P4-201ENST00000419500 CCNL1Q9UK58 526 aaPredicted RBP17.19■□□□□ 0.34
HMGN1P4-201ENST00000419500 PALLDQ8WX93 1383 aa17.18■□□□□ 0.34
HMGN1P4-201ENST00000419500 DIAPH1O60610 1272 aaKnown RBP17.18■□□□□ 0.34
HMGN1P4-201ENST00000419500 ZNF530Q6P9A1 599 aaPredicted RBP17.18■□□□□ 0.34
HMGN1P4-201ENST00000419500 SPON1Q9HCB6 807 aa17.18■□□□□ 0.34
HMGN1P4-201ENST00000419500 TMOD3Q9NYL9 352 aa17.18■□□□□ 0.34
HMGN1P4-201ENST00000419500 HSP90AB1P08238 724 aaKnown RBP17.17■□□□□ 0.34
HMGN1P4-201ENST00000419500 C1orf141Q5JVX7 400 aa17.17■□□□□ 0.34
HMGN1P4-201ENST00000419500 KCNQ4P56696 695 aa17.16■□□□□ 0.34
HMGN1P4-201ENST00000419500 ZNF827Q17R98 1081 aa17.16■□□□□ 0.34
HMGN1P4-201ENST00000419500 SMARCC1Q92922 1105 aaPredicted RBP17.16■□□□□ 0.34
HMGN1P4-201ENST00000419500 PPP1R1BQ9UD71 204 aaPredicted RBP17.16■□□□□ 0.34
HMGN1P4-201ENST00000419500 HMOX1P09601 288 aa17.15■□□□□ 0.34
HMGN1P4-201ENST00000419500 PIGBQ92521 554 aa17.15■□□□□ 0.34
HMGN1P4-201ENST00000419500 DCAF5Q96JK2 942 aa17.15■□□□□ 0.34
HMGN1P4-201ENST00000419500 COL3A1P02461 1466 aaPredicted RBP17.15■□□□□ 0.34
HMGN1P4-201ENST00000419500 C5P01031 1676 aa17.15■□□□□ 0.34
HMGN1P4-201ENST00000419500 ZBTB7AO95365 584 aa17.14■□□□□ 0.33
HMGN1P4-201ENST00000419500 HMGB2P26583 209 aaKnown RBP17.14■□□□□ 0.33
HMGN1P4-201ENST00000419500 CFAP53Q96M91 514 aa17.14■□□□□ 0.33
HMGN1P4-201ENST00000419500 PDGFDQ9GZP0 370 aaPredicted RBP17.14■□□□□ 0.33
HMGN1P4-201ENST00000419500 TFCP2L1Q9NZI6 479 aa17.14■□□□□ 0.33
HMGN1P4-201ENST00000419500 QSER1Q2KHR3 1735 aa17.13■□□□□ 0.33
HMGN1P4-201ENST00000419500 U2SURPO15042 1029 aaKnown RBP17.13■□□□□ 0.33
HMGN1P4-201ENST00000419500 AKT1S1Q96B36 256 aa17.13■□□□□ 0.33
HMGN1P4-201ENST00000419500 KDM6AO15550 1401 aaPredicted RBP17.12■□□□□ 0.33
HMGN1P4-201ENST00000419500 ERVV-2B6SEH9 535 aa17.11■□□□□ 0.33
HMGN1P4-201ENST00000419500 MTFR1LQ9H019 292 aa17.11■□□□□ 0.33
HMGN1P4-201ENST00000419500 TUBGCP6Q96RT7 1819 aa17.11■□□□□ 0.33
HMGN1P4-201ENST00000419500 PPP2R1AP30153 589 aa17.1■□□□□ 0.33
HMGN1P4-201ENST00000419500 CABP4P57796 275 aa17.1■□□□□ 0.33
HMGN1P4-201ENST00000419500 TAF1LQ8IZX4 1826 aa17.1■□□□□ 0.33
HMGN1P4-201ENST00000419500 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
HMGN1P4-201ENST00000419500 ASAP1Q9ULH1 1129 aa17.09■□□□□ 0.33
HMGN1P4-201ENST00000419500 ATF5Q9Y2D1 282 aaPredicted RBP17.09■□□□□ 0.33
HMGN1P4-201ENST00000419500 PNPLA7Q6ZV29 1317 aa17.09■□□□□ 0.33
HMGN1P4-201ENST00000419500 C4BP0C0L5 1744 aa17.09■□□□□ 0.33
HMGN1P4-201ENST00000419500 LOC102724428A0A0B4J2F2 783 aa17.08■□□□□ 0.32
HMGN1P4-201ENST00000419500 SIK1P57059 783 aa17.08■□□□□ 0.32
HMGN1P4-201ENST00000419500 AK7Q96M32 723 aa17.07■□□□□ 0.32
HMGN1P4-201ENST00000419500 NUDCQ9Y266 331 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms