RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 PIK3C2AO00443 1686 aa33.21■■■□□ 2.91
FOXA2-202ENST00000419308 FOXO3O43524 673 aa33.21■■■□□ 2.91
FOXA2-202ENST00000419308 RBM25P49756 843 aaKnown RBP33.21■■■□□ 2.91
FOXA2-202ENST00000419308 MTHFSDQ2M296 383 aaKnown RBP33.21■■■□□ 2.91
FOXA2-202ENST00000419308 XRN1Q8IZH2 1706 aaKnown RBP33.21■■■□□ 2.91
FOXA2-202ENST00000419308 RIMS1Q86UR5 1692 aaKnown RBP33.2■■■□□ 2.91
FOXA2-202ENST00000419308 AMPHP49418 695 aa33.18■■■□□ 2.9
FOXA2-202ENST00000419308 PTPRCP08575 1304 aa33.17■■■□□ 2.9
FOXA2-202ENST00000419308 IGSF1Q8N6C5 1336 aa33.17■■■□□ 2.9
FOXA2-202ENST00000419308 SPRYD3Q8NCJ5 442 aa33.17■■■□□ 2.9
FOXA2-202ENST00000419308 EYA1Q99502 592 aa33.17■■■□□ 2.9
FOXA2-202ENST00000419308 MIS18AQ9NYP9 233 aa33.17■■■□□ 2.9
FOXA2-202ENST00000419308 DCTPP1Q9H773 170 aa33.16■■■□□ 2.9
FOXA2-202ENST00000419308 CEP170BQ9Y4F5 1589 aaPredicted RBP33.16■■■□□ 2.9
FOXA2-202ENST00000419308 RTF1Q92541 710 aaKnown RBP33.16■■■□□ 2.9
FOXA2-202ENST00000419308 ATP10DQ9P241 1426 aa33.15■■■□□ 2.9
FOXA2-202ENST00000419308 ANKARQ7Z5J8 1434 aa33.15■■■□□ 2.9
FOXA2-202ENST00000419308 KCNA6P17658 529 aa33.14■■■□□ 2.9
FOXA2-202ENST00000419308 NLRP6P59044 892 aa33.13■■■□□ 2.89
FOXA2-202ENST00000419308 ANKRD44Q8N8A2 993 aa33.13■■■□□ 2.89
FOXA2-202ENST00000419308 SLC4A2P04920 1241 aa33.12■■■□□ 2.89
FOXA2-202ENST00000419308 MSH6P52701 1360 aa33.12■■■□□ 2.89
FOXA2-202ENST00000419308 TBC1D9Q6ZT07 1266 aa33.12■■■□□ 2.89
FOXA2-202ENST00000419308 TSPYL4Q9UJ04 414 aa33.12■■■□□ 2.89
FOXA2-202ENST00000419308 HSCBQ8IWL3 235 aa33.11■■■□□ 2.89
FOXA2-202ENST00000419308 RPAP2Q8IXW5 612 aaPredicted RBP33.1■■■□□ 2.89
FOXA2-202ENST00000419308 GAS2L2Q8NHY3 880 aa33.1■■■□□ 2.89
FOXA2-202ENST00000419308 RTL1A6NKG5 1358 aa33.09■■■□□ 2.89
FOXA2-202ENST00000419308 CEP85Q6P2H3 762 aa33.09■■■□□ 2.89
FOXA2-202ENST00000419308 PLEKHM2Q8IWE5 1019 aa33.08■■■□□ 2.89
FOXA2-202ENST00000419308 MARF1Q9Y4F3 1742 aaKnown RBP33.08■■■□□ 2.89
FOXA2-202ENST00000419308 SNX21Q969T3 373 aa33.07■■■□□ 2.88
FOXA2-202ENST00000419308 MEIS3Q99687 375 aa33.07■■■□□ 2.88
FOXA2-202ENST00000419308 NUTM2GQ5VZR2 741 aa33.06■■■□□ 2.88
FOXA2-202ENST00000419308 GSPT1P15170 499 aaKnown RBP33.06■■■□□ 2.88
FOXA2-202ENST00000419308 HOXC9P31274 260 aa33.06■■■□□ 2.88
FOXA2-202ENST00000419308 CHMP5Q9NZZ3 219 aa33.05■■■□□ 2.88
FOXA2-202ENST00000419308 KIF2CQ99661 725 aa33.04■■■□□ 2.88
FOXA2-202ENST00000419308 G2E3Q7L622 706 aa33.03■■■□□ 2.88
FOXA2-202ENST00000419308 CDC45O75419 566 aa33.03■■■□□ 2.88
FOXA2-202ENST00000419308 NCOA3Q9Y6Q9 1424 aa33.02■■■□□ 2.88
FOXA2-202ENST00000419308 HTATSF1O43719 755 aaKnown RBP33.02■■■□□ 2.88
FOXA2-202ENST00000419308 USP54Q70EL1 1684 aa33.02■■■□□ 2.88
FOXA2-202ENST00000419308 C16orf71Q8IYS4 520 aaPredicted RBP33.01■■■□□ 2.88
FOXA2-202ENST00000419308 NWD1Q149M9 1564 aa33.01■■■□□ 2.88
FOXA2-202ENST00000419308 ABTB2Q8N961 1025 aa33.01■■■□□ 2.87
FOXA2-202ENST00000419308 IL27Q8NEV9 243 aa33.01■■■□□ 2.87
FOXA2-202ENST00000419308 LRRC37A3O60309 1634 aa33.01■■■□□ 2.87
FOXA2-202ENST00000419308 TTC22Q5TAA0 569 aa32.99■■■□□ 2.87
FOXA2-202ENST00000419308 GNAT3A8MTJ3 354 aa32.98■■■□□ 2.87
FOXA2-202ENST00000419308 F6X3S4 739 aa32.98■■■□□ 2.87
FOXA2-202ENST00000419308 SLC4A10Q6U841 1118 aa32.97■■■□□ 2.87
FOXA2-202ENST00000419308 CCT4P50991 539 aaKnown RBP32.96■■■□□ 2.87
FOXA2-202ENST00000419308 MCM4P33991 863 aa32.96■■■□□ 2.87
FOXA2-202ENST00000419308 DDIT3P35638 169 aa32.96■■■□□ 2.87
FOXA2-202ENST00000419308 OTUD7AQ8TE49 926 aaPredicted RBP32.96■■■□□ 2.87
FOXA2-202ENST00000419308 STK31Q9BXU1 1019 aa32.94■■■□□ 2.86
FOXA2-202ENST00000419308 BRPF3Q9ULD4 1205 aa32.94■■■□□ 2.86
FOXA2-202ENST00000419308 SMARCA5O60264 1052 aaPredicted RBP32.92■■■□□ 2.86
FOXA2-202ENST00000419308 LTV1Q96GA3 475 aaPredicted RBP32.92■■■□□ 2.86
FOXA2-202ENST00000419308 IL17REQ8NFR9 667 aa32.92■■■□□ 2.86
FOXA2-202ENST00000419308 MAP3K5Q99683 1374 aa32.92■■■□□ 2.86
FOXA2-202ENST00000419308 APBB1O00213 710 aa32.91■■■□□ 2.86
FOXA2-202ENST00000419308 PHF8Q9UPP1 1060 aa32.91■■■□□ 2.86
FOXA2-202ENST00000419308 HMMRO75330 724 aa32.9■■■□□ 2.86
FOXA2-202ENST00000419308 CD2BP2O95400 341 aaKnown RBP32.9■■■□□ 2.86
FOXA2-202ENST00000419308 FAM208AQ9UK61 1670 aaKnown RBP32.89■■■□□ 2.86
FOXA2-202ENST00000419308 HSP90AB1P08238 724 aaKnown RBP32.89■■■□□ 2.86
FOXA2-202ENST00000419308 CCDC30Q5VVM6 783 aa32.89■■■□□ 2.86
FOXA2-202ENST00000419308 C14orf37Q86TY3 774 aa32.89■■■□□ 2.86
FOXA2-202ENST00000419308 CHD2O14647 1828 aaKnown RBP32.89■■■□□ 2.86
FOXA2-202ENST00000419308 EIF5BO60841 1220 aaKnown RBP32.88■■■□□ 2.85
FOXA2-202ENST00000419308 FLIIQ13045 1269 aa32.88■■■□□ 2.85
FOXA2-202ENST00000419308 RBM42Q9BTD8 480 aaKnown RBP32.88■■■□□ 2.85
FOXA2-202ENST00000419308 SDSP20132 328 aa32.86■■■□□ 2.85
FOXA2-202ENST00000419308 TAF7Q15545 349 aaPredicted RBP32.86■■■□□ 2.85
FOXA2-202ENST00000419308 LTN1O94822 1766 aa32.85■■■□□ 2.85
FOXA2-202ENST00000419308 USHBP1Q8N6Y0 703 aa32.85■■■□□ 2.85
FOXA2-202ENST00000419308 GNAI2P04899 355 aa32.85■■■□□ 2.85
FOXA2-202ENST00000419308 FKBP5Q13451 457 aaPredicted RBP32.85■■■□□ 2.85
FOXA2-202ENST00000419308 ANKLE2Q86XL3 938 aa32.85■■■□□ 2.85
FOXA2-202ENST00000419308 BABAM1Q9NWV8 329 aa32.85■■■□□ 2.85
FOXA2-202ENST00000419308 SOS1Q07889 1333 aaPredicted RBP32.84■■■□□ 2.85
FOXA2-202ENST00000419308 NECTIN2Q92692 538 aa32.84■■■□□ 2.85
FOXA2-202ENST00000419308 K7ELQ4 463 aaPredicted RBP32.83■■■□□ 2.85
FOXA2-202ENST00000419308 RBM33Q96EV2 1170 aaKnown RBP32.83■■■□□ 2.85
FOXA2-202ENST00000419308 CIZ1Q9ULV3 898 aaPredicted RBP32.82■■■□□ 2.85
FOXA2-202ENST00000419308 CACNA1FO60840 1977 aa32.82■■■□□ 2.84
FOXA2-202ENST00000419308 IP6K1Q92551 441 aa32.81■■■□□ 2.84
FOXA2-202ENST00000419308 USP26Q9BXU7 913 aa32.8■■■□□ 2.84
FOXA2-202ENST00000419308 NFAT5O94916 1531 aa32.8■■■□□ 2.84
FOXA2-202ENST00000419308 GNAI3P08754 354 aa32.78■■■□□ 2.84
FOXA2-202ENST00000419308 TRHP20396 242 aaPredicted RBP32.78■■■□□ 2.84
FOXA2-202ENST00000419308 OSBPL3Q9H4L5 887 aa32.78■■■□□ 2.84
FOXA2-202ENST00000419308 HSP90AA1P07900 732 aaKnown RBP32.77■■■□□ 2.84
FOXA2-202ENST00000419308 CASC1Q6TDU7 716 aa32.77■■■□□ 2.84
FOXA2-202ENST00000419308 TRAK2O60296 914 aa32.76■■■□□ 2.83
FOXA2-202ENST00000419308 NBPF6Q5VWK0 638 aa32.76■■■□□ 2.83
FOXA2-202ENST00000419308 TNPO1Q92973 898 aaKnown RBP32.76■■■□□ 2.83
FOXA2-202ENST00000419308 NBPF4Q96M43 638 aa32.76■■■□□ 2.83
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms