RNA–Protein interactions for RNA: ENST00000419277.5

HLA-DPA1-242, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

APPRIS P2 BASIC

Gene HLA-DPA1, Length 1,704 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-242ENST00000419277 TRPM3Q9HCF6 1732 aaPredicted RBP18.38■□□□□ 0.53
HLA-DPA1-242ENST00000419277 GCC1Q96CN9 775 aa18.38■□□□□ 0.53
HLA-DPA1-242ENST00000419277 THUMPD2Q9BTF0 503 aaKnown RBP18.38■□□□□ 0.53
HLA-DPA1-242ENST00000419277 CHMP4AQ9BY43 222 aa18.38■□□□□ 0.53
HLA-DPA1-242ENST00000419277 N4BP2Q86UW6 1770 aaPredicted RBP18.38■□□□□ 0.53
HLA-DPA1-242ENST00000419277 PLEKHG2Q9H7P9 1386 aa18.37■□□□□ 0.53
HLA-DPA1-242ENST00000419277 UPF2Q9HAU5 1272 aaKnown RBP18.37■□□□□ 0.53
HLA-DPA1-242ENST00000419277 PDZRN3Q9UPQ7 1066 aa18.37■□□□□ 0.53
HLA-DPA1-242ENST00000419277 CAMTA1Q9Y6Y1 1673 aa18.37■□□□□ 0.53
HLA-DPA1-242ENST00000419277 EYA1Q99502 592 aa18.37■□□□□ 0.53
HLA-DPA1-242ENST00000419277 ABCC6O95255 1503 aa18.36■□□□□ 0.53
HLA-DPA1-242ENST00000419277 MAP3K5Q99683 1374 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 FAM208AQ9UK61 1670 aaKnown RBP18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 EIF5BO60841 1220 aaKnown RBP18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 IP6K1Q92551 441 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 OVOS2A0A0G2JMS6 1433 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 NCAPD2Q15021 1401 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 ZBTB7BO15156 539 aaPredicted RBP18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 NPM2Q86SE8 214 aaKnown RBP18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 C8orf58Q8NAV2 365 aa18.35■□□□□ 0.53
HLA-DPA1-242ENST00000419277 LMO7Q8WWI1 1683 aa18.34■□□□□ 0.53
HLA-DPA1-242ENST00000419277 MED1Q15648 1581 aaPredicted RBP18.33■□□□□ 0.53
HLA-DPA1-242ENST00000419277 GNAT3A8MTJ3 354 aa18.33■□□□□ 0.52
HLA-DPA1-242ENST00000419277 PSME1Q06323 249 aa18.33■□□□□ 0.52
HLA-DPA1-242ENST00000419277 MTHFSDQ2M296 383 aaKnown RBP18.33■□□□□ 0.52
HLA-DPA1-242ENST00000419277 INTS3Q68E01 1043 aaKnown RBP18.33■□□□□ 0.52
HLA-DPA1-242ENST00000419277 PAK3O75914 559 aaPredicted RBP18.32■□□□□ 0.52
HLA-DPA1-242ENST00000419277 SKAP1Q86WV1 359 aa18.32■□□□□ 0.52
HLA-DPA1-242ENST00000419277 DAXXQ9UER7 740 aaPredicted RBP18.32■□□□□ 0.52
HLA-DPA1-242ENST00000419277 ESCO1Q5FWF5 840 aa18.32■□□□□ 0.52
HLA-DPA1-242ENST00000419277 ALS2Q96Q42 1657 aa18.31■□□□□ 0.52
HLA-DPA1-242ENST00000419277 SOX12O15370 315 aa18.31■□□□□ 0.52
HLA-DPA1-242ENST00000419277 USP19O94966 1318 aa18.31■□□□□ 0.52
HLA-DPA1-242ENST00000419277 PXDNLA1KZ92 1463 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 NUCB1Q02818 461 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 DCTN1Q14203 1278 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 MCM10Q7L590 875 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 C14orf37Q86TY3 774 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 TSPYL4Q9UJ04 414 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 RGS12O14924 1447 aa18.3■□□□□ 0.52
HLA-DPA1-242ENST00000419277 C19orf44Q9H6X5 657 aa18.29■□□□□ 0.52
HLA-DPA1-242ENST00000419277 USP35Q9P2H5 1018 aa18.29■□□□□ 0.52
HLA-DPA1-242ENST00000419277 C1orf167Q5SNV9 1468 aa18.29■□□□□ 0.52
HLA-DPA1-242ENST00000419277 KDM3BQ7LBC6 1761 aa18.28■□□□□ 0.52
HLA-DPA1-242ENST00000419277 CEMIPQ8WUJ3 1361 aa18.27■□□□□ 0.52
HLA-DPA1-242ENST00000419277 MSH6P52701 1360 aa18.27■□□□□ 0.51
HLA-DPA1-242ENST00000419277 HOXB7P09629 217 aa18.26■□□□□ 0.51
HLA-DPA1-242ENST00000419277 RPAP2Q8IXW5 612 aaPredicted RBP18.26■□□□□ 0.51
HLA-DPA1-242ENST00000419277 ELL2O00472 640 aaPredicted RBP18.26■□□□□ 0.51
HLA-DPA1-242ENST00000419277 BECN1Q14457 450 aa18.26■□□□□ 0.51
HLA-DPA1-242ENST00000419277 STK31Q9BXU1 1019 aa18.26■□□□□ 0.51
HLA-DPA1-242ENST00000419277 CCT4P50991 539 aaKnown RBP18.25■□□□□ 0.51
HLA-DPA1-242ENST00000419277 AMOTQ4VCS5 1084 aa18.25■□□□□ 0.51
HLA-DPA1-242ENST00000419277 CCDC30Q5VVM6 783 aa18.25■□□□□ 0.51
HLA-DPA1-242ENST00000419277 CHD1LQ86WJ1 897 aa18.25■□□□□ 0.51
HLA-DPA1-242ENST00000419277 PROSER2Q86WR7 435 aaPredicted RBP18.24■□□□□ 0.51
HLA-DPA1-242ENST00000419277 ADAMTS7Q9UKP4 1686 aa18.23■□□□□ 0.51
HLA-DPA1-242ENST00000419277 TAF7Q15545 349 aaPredicted RBP18.23■□□□□ 0.51
HLA-DPA1-242ENST00000419277 BMP2KLQ5H9B9 411 aa18.23■□□□□ 0.51
HLA-DPA1-242ENST00000419277 ARHGEF25Q86VW2 580 aa18.23■□□□□ 0.51
HLA-DPA1-242ENST00000419277 ATP10DQ9P241 1426 aa18.23■□□□□ 0.51
HLA-DPA1-242ENST00000419277 TBC1D32Q96NH3 1257 aa18.22■□□□□ 0.51
HLA-DPA1-242ENST00000419277 GCP02774 474 aa18.21■□□□□ 0.51
HLA-DPA1-242ENST00000419277 HMMRO75330 724 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 RTL5Q5HYW3 569 aaPredicted RBP18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 NUTM2GQ5VZR2 741 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 RGPD2P0DJD1 1756 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 FOXO3O43524 673 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 PLEKHO1Q53GL0 409 aaPredicted RBP18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 AKAP4Q5JQC9 854 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 ANKRD44Q8N8A2 993 aa18.2■□□□□ 0.5
HLA-DPA1-242ENST00000419277 SLC4A2P04920 1241 aa18.19■□□□□ 0.5
HLA-DPA1-242ENST00000419277 ATF3P18847 181 aa18.19■□□□□ 0.5
HLA-DPA1-242ENST00000419277 CADPS2Q86UW7 1296 aa18.19■□□□□ 0.5
HLA-DPA1-242ENST00000419277 STRCP1A6NGW2 1772 aa18.18■□□□□ 0.5
HLA-DPA1-242ENST00000419277 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
HLA-DPA1-242ENST00000419277 NPHP3Q7Z494 1330 aa18.18■□□□□ 0.5
HLA-DPA1-242ENST00000419277 CRYBG1Q9Y4K1 1723 aa18.18■□□□□ 0.5
HLA-DPA1-242ENST00000419277 SIPA1L3O60292 1781 aaPredicted RBP18.17■□□□□ 0.5
HLA-DPA1-242ENST00000419277 KRT28Q7Z3Y7 464 aa18.17■□□□□ 0.5
HLA-DPA1-242ENST00000419277 TMEM94Q12767 1356 aa18.16■□□□□ 0.5
HLA-DPA1-242ENST00000419277 IL17REQ8NFR9 667 aa18.16■□□□□ 0.5
HLA-DPA1-242ENST00000419277 ORAI2Q96SN7 254 aa18.16■□□□□ 0.5
HLA-DPA1-242ENST00000419277 TNS3Q68CZ2 1445 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 GNAI3P08754 354 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 NBPF6Q5VWK0 638 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 NBPF4Q96M43 638 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 ANKRD45Q5TZF3 282 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 SIRT2Q8IXJ6 389 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 LNPKQ9C0E8 428 aa18.15■□□□□ 0.5
HLA-DPA1-242ENST00000419277 FLIIQ13045 1269 aa18.14■□□□□ 0.49
HLA-DPA1-242ENST00000419277 KRT24Q2M2I5 525 aa18.14■□□□□ 0.49
HLA-DPA1-242ENST00000419277 CEP85Q6P2H3 762 aa18.14■□□□□ 0.49
HLA-DPA1-242ENST00000419277 LTV1Q96GA3 475 aaPredicted RBP18.14■□□□□ 0.49
HLA-DPA1-242ENST00000419277 C1orf141Q5JVX7 400 aa18.13■□□□□ 0.49
HLA-DPA1-242ENST00000419277 ERBB3P21860 1342 aa18.13■□□□□ 0.49
HLA-DPA1-242ENST00000419277 COL18A1P39060 1754 aa18.12■□□□□ 0.49
HLA-DPA1-242ENST00000419277 TEFQ10587 303 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms