RNA–Protein interactions for RNA: ENST00000419181.5

GTF3A-202, Transcript of general transcription factor IIIA, humanhuman

TSL 1 (best)

Gene GTF3A, Length 1,191 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3A-202ENST00000419181 PSDA5PKW4 1024 aaPredicted RBP27.78■■■□□ 2.04
GTF3A-202ENST00000419181 RAPGEF4Q8WZA2 1011 aa27.78■■■□□ 2.04
GTF3A-202ENST00000419181 PLSCR1O15162 318 aa27.77■■■□□ 2.04
GTF3A-202ENST00000419181 ZCRB1Q8TBF4 217 aaKnown RBP27.77■■■□□ 2.04
GTF3A-202ENST00000419181 DDX54Q8TDD1 881 aaKnown RBP27.77■■■□□ 2.04
GTF3A-202ENST00000419181 KCNQ2O43526 872 aa27.75■■■□□ 2.03
GTF3A-202ENST00000419181 SRCAPQ6ZRS2 3230 aa27.74■■■□□ 2.03
GTF3A-202ENST00000419181 TATP17735 454 aaPredicted RBP27.74■■■□□ 2.03
GTF3A-202ENST00000419181 EIF4A2Q14240 407 aaKnown RBP27.74■■■□□ 2.03
GTF3A-202ENST00000419181 ACSBG1Q96GR2 724 aa27.74■■■□□ 2.03
GTF3A-202ENST00000419181 EYA1Q99502 592 aa27.74■■■□□ 2.03
GTF3A-202ENST00000419181 PKD1L3Q7Z443 1732 aa27.73■■■□□ 2.03
GTF3A-202ENST00000419181 KAT6BQ8WYB5 2073 aa27.73■■■□□ 2.03
GTF3A-202ENST00000419181 BTAF1O14981 1849 aa27.72■■■□□ 2.03
GTF3A-202ENST00000419181 DOT1LQ8TEK3 1739 aa27.72■■■□□ 2.03
GTF3A-202ENST00000419181 R3HDM1Q15032 1099 aaKnown RBP27.71■■■□□ 2.03
GTF3A-202ENST00000419181 NPC1L1Q9UHC9 1359 aa27.71■■■□□ 2.03
GTF3A-202ENST00000419181 PCDH11XQ9BZA7 1347 aa27.67■■■□□ 2.02
GTF3A-202ENST00000419181 PCDH11YQ9BZA8 1340 aa27.67■■■□□ 2.02
GTF3A-202ENST00000419181 CC2D1BQ5T0F9 858 aaKnown RBP27.67■■■□□ 2.02
GTF3A-202ENST00000419181 PROM2Q8N271 834 aa27.67■■■□□ 2.02
GTF3A-202ENST00000419181 IGSF1Q8N6C5 1336 aa27.67■■■□□ 2.02
GTF3A-202ENST00000419181 NBPF14Q5TI25 921 aa27.65■■■□□ 2.02
GTF3A-202ENST00000419181 PLEKHG2Q9H7P9 1386 aa27.62■■■□□ 2.01
GTF3A-202ENST00000419181 CYP27B1O15528 508 aa27.62■■■□□ 2.01
GTF3A-202ENST00000419181 TXNRD1Q16881 649 aa27.62■■■□□ 2.01
GTF3A-202ENST00000419181 PRIM1P49642 420 aaKnown RBP27.61■■■□□ 2.01
GTF3A-202ENST00000419181 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP27.61■■■□□ 2.011e-6■■□□□ 11.9
GTF3A-202ENST00000419181 MTHFSP49914 203 aa27.6■■■□□ 2.01
GTF3A-202ENST00000419181 SPG7Q9UQ90 795 aa27.6■■■□□ 2.01
GTF3A-202ENST00000419181 LRP5O75197 1615 aa27.59■■■□□ 2.01
GTF3A-202ENST00000419181 TOGARAM1Q9Y4F4 1720 aa27.59■■■□□ 2.01
GTF3A-202ENST00000419181 SYTL4Q96C24 671 aaPredicted RBP27.59■■■□□ 2.01
GTF3A-202ENST00000419181 ANO8Q9HCE9 1232 aaPredicted RBP27.58■■■□□ 2.01
GTF3A-202ENST00000419181 IL13P35225 146 aa27.57■■■□□ 2
GTF3A-202ENST00000419181 PAPPAQ13219 1627 aa27.56■■■□□ 2
GTF3A-202ENST00000419181 LY75O60449 1722 aa27.55■■■□□ 2
GTF3A-202ENST00000419181 ITGB4P16144 1822 aa27.54■■■□□ 2
GTF3A-202ENST00000419181 KDRP35968 1356 aa27.54■■■□□ 2
GTF3A-202ENST00000419181 CNGB1Q14028 1251 aaPredicted RBP27.54■■■□□ 2
GTF3A-202ENST00000419181 NKX1-1Q15270 411 aaPredicted RBP27.54■■■□□ 2
GTF3A-202ENST00000419181 AEBP1Q8IUX7 1158 aa27.53■■■□□ 2
GTF3A-202ENST00000419181 COL3A1P02461 1466 aaPredicted RBP27.51■■□□□ 1.99
GTF3A-202ENST00000419181 PHKG2P15735 406 aa27.5■■□□□ 1.99
GTF3A-202ENST00000419181 SULT6B1Q6IMI4 303 aa27.5■■□□□ 1.99
GTF3A-202ENST00000419181 IFNL2Q8IZJ0 200 aa27.5■■□□□ 1.99
GTF3A-202ENST00000419181 LRRC4BQ9NT99 713 aa27.49■■□□□ 1.99
GTF3A-202ENST00000419181 CASZ1Q86V15 1759 aa27.49■■□□□ 1.99
GTF3A-202ENST00000419181 SLC27A3Q5K4L6 730 aa27.48■■□□□ 1.99
GTF3A-202ENST00000419181 PLEKHO1Q53GL0 409 aaPredicted RBP27.47■■□□□ 1.99
GTF3A-202ENST00000419181 STK32BQ9NY57 414 aa27.47■■□□□ 1.99
GTF3A-202ENST00000419181 DIAPH1O60610 1272 aaKnown RBP27.46■■□□□ 1.99
GTF3A-202ENST00000419181 SLC15A2Q16348 729 aa27.46■■□□□ 1.99
GTF3A-202ENST00000419181 AMOTQ4VCS5 1084 aa27.46■■□□□ 1.99
GTF3A-202ENST00000419181 MPRIPQ6WCQ1 1025 aa27.46■■□□□ 1.99
GTF3A-202ENST00000419181 ZNF530Q6P9A1 599 aaPredicted RBP27.42■■□□□ 1.98
GTF3A-202ENST00000419181 PIGBQ92521 554 aa27.42■■□□□ 1.98
GTF3A-202ENST00000419181 PALLDQ8WX93 1383 aa27.41■■□□□ 1.98
GTF3A-202ENST00000419181 HMOX1P09601 288 aa27.4■■□□□ 1.98
GTF3A-202ENST00000419181 KCNQ4P56696 695 aa27.4■■□□□ 1.98
GTF3A-202ENST00000419181 ZNF827Q17R98 1081 aa27.4■■□□□ 1.98
GTF3A-202ENST00000419181 PDGFDQ9GZP0 370 aaPredicted RBP27.4■■□□□ 1.98
GTF3A-202ENST00000419181 CCNL1Q9UK58 526 aaPredicted RBP27.4■■□□□ 1.98
GTF3A-202ENST00000419181 HSP90AB1P08238 724 aaKnown RBP27.39■■□□□ 1.98
GTF3A-202ENST00000419181 PPP2R1AP30153 589 aa27.39■■□□□ 1.98
GTF3A-202ENST00000419181 DCAF5Q96JK2 942 aa27.39■■□□□ 1.98
GTF3A-202ENST00000419181 KDM6AO15550 1401 aaPredicted RBP27.39■■□□□ 1.97
GTF3A-202ENST00000419181 QSER1Q2KHR3 1735 aa27.38■■□□□ 1.97
GTF3A-202ENST00000419181 AKT1S1Q96B36 256 aa27.38■■□□□ 1.97
GTF3A-202ENST00000419181 SPON1Q9HCB6 807 aa27.38■■□□□ 1.97
GTF3A-202ENST00000419181 TMOD3Q9NYL9 352 aa27.38■■□□□ 1.97
GTF3A-202ENST00000419181 C5P01031 1676 aa27.37■■□□□ 1.97
GTF3A-202ENST00000419181 SMARCC1Q92922 1105 aaPredicted RBP27.37■■□□□ 1.97
GTF3A-202ENST00000419181 C1orf141Q5JVX7 400 aa27.36■■□□□ 1.97
GTF3A-202ENST00000419181 TAF1LQ8IZX4 1826 aa27.36■■□□□ 1.97
GTF3A-202ENST00000419181 TUBGCP6Q96RT7 1819 aa27.36■■□□□ 1.97
GTF3A-202ENST00000419181 ERVV-2B6SEH9 535 aa27.35■■□□□ 1.97
GTF3A-202ENST00000419181 CFAP53Q96M91 514 aa27.35■■□□□ 1.97
GTF3A-202ENST00000419181 ZEB1P37275 1124 aaPredicted RBP27.34■■□□□ 1.97
GTF3A-202ENST00000419181 SCN11AQ9UI33 1791 aa27.33■■□□□ 1.97
GTF3A-202ENST00000419181 U2SURPO15042 1029 aaKnown RBP27.33■■□□□ 1.97
GTF3A-202ENST00000419181 PPP1R1BQ9UD71 204 aaPredicted RBP27.33■■□□□ 1.97
GTF3A-202ENST00000419181 ASAP1Q9ULH1 1129 aa27.31■■□□□ 1.96
GTF3A-202ENST00000419181 ZBTB7AO95365 584 aa27.3■■□□□ 1.96
GTF3A-202ENST00000419181 AKAP4Q5JQC9 854 aa27.3■■□□□ 1.96
GTF3A-202ENST00000419181 ATG3Q9NT62 314 aa27.29■■□□□ 1.96
GTF3A-202ENST00000419181 VIRMAQ69YN4 1812 aaKnown RBP27.29■■□□□ 1.96
GTF3A-202ENST00000419181 PNPLA7Q6ZV29 1317 aa27.28■■□□□ 1.96
GTF3A-202ENST00000419181 DDX10Q13206 875 aaKnown RBP27.28■■□□□ 1.96
GTF3A-202ENST00000419181 TFCP2L1Q9NZI6 479 aa27.28■■□□□ 1.96
GTF3A-202ENST00000419181 C4BP0C0L5 1744 aa27.27■■□□□ 1.96
GTF3A-202ENST00000419181 ADAMTS7Q9UKP4 1686 aa27.27■■□□□ 1.96
GTF3A-202ENST00000419181 LOC102724428A0A0B4J2F2 783 aa27.27■■□□□ 1.96
GTF3A-202ENST00000419181 HMGB2P26583 209 aaKnown RBP27.27■■□□□ 1.96
GTF3A-202ENST00000419181 SIK1P57059 783 aa27.27■■□□□ 1.96
GTF3A-202ENST00000419181 CABP4P57796 275 aa27.27■■□□□ 1.96
GTF3A-202ENST00000419181 MTHFSDQ2M296 383 aaKnown RBP27.27■■□□□ 1.96
GTF3A-202ENST00000419181 MTFR1LQ9H019 292 aa27.26■■□□□ 1.95
GTF3A-202ENST00000419181 NUDCQ9Y266 331 aa27.26■■□□□ 1.95
GTF3A-202ENST00000419181 ZNF831Q5JPB2 1677 aa27.25■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms