RNA–Protein interactions for RNA: ENST00000419016.6

CHMP5-202, Transcript of charged multivesicular body protein 5, humanhuman

TSL 2 BASIC

Gene CHMP5, Length 1,957 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP5-202ENST00000419016 CRB1P82279 1406 aa17.97■□□□□ 0.47
CHMP5-202ENST00000419016 GNAT3A8MTJ3 354 aa17.97■□□□□ 0.47
CHMP5-202ENST00000419016 MCM10Q7L590 875 aa17.97■□□□□ 0.47
CHMP5-202ENST00000419016 IFT57Q9NWB7 429 aa17.97■□□□□ 0.47
CHMP5-202ENST00000419016 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.97■□□□□ 0.473e-7■■□□□ 12.6
CHMP5-202ENST00000419016 MAP3K5Q99683 1374 aa17.96■□□□□ 0.47
CHMP5-202ENST00000419016 TOM1L2Q6ZVM7 507 aa17.96■□□□□ 0.47
CHMP5-202ENST00000419016 RAPGEF4Q8WZA2 1011 aa17.96■□□□□ 0.47
CHMP5-202ENST00000419016 ADAMTS2O95450 1211 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 HSPA1LP34931 641 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 EVA1CP58658 441 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 TSR2Q969E8 191 aaKnown RBP17.95■□□□□ 0.46
CHMP5-202ENST00000419016 CFAP44Q96MT7 982 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 GTF3C3Q9Y5Q9 886 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 IL17REQ8NFR9 667 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 STRN4Q9NRL3 753 aa17.95■□□□□ 0.46
CHMP5-202ENST00000419016 TATP17735 454 aaPredicted RBP17.94■□□□□ 0.46
CHMP5-202ENST00000419016 GNAI1P63096 354 aa17.94■□□□□ 0.46
CHMP5-202ENST00000419016 AKAP4Q5JQC9 854 aa17.94■□□□□ 0.46
CHMP5-202ENST00000419016 RTF1Q92541 710 aaKnown RBP17.94■□□□□ 0.46
CHMP5-202ENST00000419016 LRRC37A3O60309 1634 aa17.94■□□□□ 0.46
CHMP5-202ENST00000419016 OVOS2A0A0G2JMS6 1433 aa17.93■□□□□ 0.46
CHMP5-202ENST00000419016 CEMIPQ8WUJ3 1361 aa17.93■□□□□ 0.46
CHMP5-202ENST00000419016 SPATA31A6Q5VVP1 1343 aa17.93■□□□□ 0.46
CHMP5-202ENST00000419016 NUTM2BA6NNL0 878 aaPredicted RBP17.93■□□□□ 0.46
CHMP5-202ENST00000419016 NUTM2EB1AL46 878 aaPredicted RBP17.93■□□□□ 0.46
CHMP5-202ENST00000419016 NUTM2AQ8IVF1 878 aaPredicted RBP17.93■□□□□ 0.46
CHMP5-202ENST00000419016 CHL1O00533 1208 aa17.93■□□□□ 0.46
CHMP5-202ENST00000419016 ZNF530Q6P9A1 599 aaPredicted RBP17.93■□□□□ 0.46
CHMP5-202ENST00000419016 SLIT2O94813 1529 aa17.92■□□□□ 0.46
CHMP5-202ENST00000419016 PLCH1Q4KWH8 1693 aa17.92■□□□□ 0.46
CHMP5-202ENST00000419016 MBIPQ9NS73 344 aa17.91■□□□□ 0.46
CHMP5-202ENST00000419016 PKD1L3Q7Z443 1732 aa17.91■□□□□ 0.46
CHMP5-202ENST00000419016 NRAPQ86VF7 1730 aa17.91■□□□□ 0.46
CHMP5-202ENST00000419016 CT47B1P0C2W7 299 aaPredicted RBP17.9■□□□□ 0.46
CHMP5-202ENST00000419016 EXOSC9Q06265 439 aaKnown RBP17.9■□□□□ 0.46
CHMP5-202ENST00000419016 SPG7Q9UQ90 795 aa17.9■□□□□ 0.46
CHMP5-202ENST00000419016 ADAMTS7Q9UKP4 1686 aa17.9■□□□□ 0.46
CHMP5-202ENST00000419016 NWD2Q9ULI1 1742 aa17.89■□□□□ 0.46
CHMP5-202ENST00000419016 LRP6O75581 1613 aa17.89■□□□□ 0.45
CHMP5-202ENST00000419016 LGR6Q9HBX8 967 aa17.89■□□□□ 0.45
CHMP5-202ENST00000419016 LAS1LQ9Y4W2 734 aaKnown RBP17.89■□□□□ 0.45
CHMP5-202ENST00000419016 IL2RBP14784 551 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 C1orf141Q5JVX7 400 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 PARP4Q9UKK3 1724 aaKnown RBP17.88■□□□□ 0.45
CHMP5-202ENST00000419016 DISP2A7MBM2 1401 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 CYP27B1O15528 508 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 PHKG2P15735 406 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 BABAM1Q9NWV8 329 aa17.88■□□□□ 0.45
CHMP5-202ENST00000419016 RNMTO43148 476 aaKnown RBP17.87■□□□□ 0.45
CHMP5-202ENST00000419016 RRP1P56182 461 aaKnown RBP17.87■□□□□ 0.45
CHMP5-202ENST00000419016 RARSP54136 660 aaKnown RBP17.86■□□□□ 0.45
CHMP5-202ENST00000419016 MPRIPQ6WCQ1 1025 aa17.86■□□□□ 0.45
CHMP5-202ENST00000419016 FNBP4Q8N3X1 1017 aaPredicted RBP17.86■□□□□ 0.45
CHMP5-202ENST00000419016 TAF7Q15545 349 aaPredicted RBP17.86■□□□□ 0.45
CHMP5-202ENST00000419016 IFNL2Q8IZJ0 200 aa17.86■□□□□ 0.45
CHMP5-202ENST00000419016 BCL9LQ86UU0 1499 aa17.85■□□□□ 0.45
CHMP5-202ENST00000419016 ZCRB1Q8TBF4 217 aaKnown RBP17.85■□□□□ 0.45
CHMP5-202ENST00000419016 SPATA31A1Q5TZJ5 1347 aa17.85■□□□□ 0.45
CHMP5-202ENST00000419016 KDM6AO15550 1401 aaPredicted RBP17.84■□□□□ 0.45
CHMP5-202ENST00000419016 VAMP4O75379 141 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 BCAR3O75815 825 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 UNC5CLQ8IV45 518 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 C8orf58Q8NAV2 365 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 MIS18AQ9NYP9 233 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 USP35Q9P2H5 1018 aa17.84■□□□□ 0.45
CHMP5-202ENST00000419016 SPATA31A5Q5VU36 1347 aa17.83■□□□□ 0.45
CHMP5-202ENST00000419016 SPATA31A7Q8IWB4 1347 aa17.83■□□□□ 0.45
CHMP5-202ENST00000419016 NEFLP07196 543 aa17.83■□□□□ 0.44
CHMP5-202ENST00000419016 FKBP8Q14318 412 aa17.83■□□□□ 0.44
CHMP5-202ENST00000419016 TSPYL6Q8N831 410 aa17.83■□□□□ 0.44
CHMP5-202ENST00000419016 THRAP3Q9Y2W1 955 aaKnown RBP17.83■□□□□ 0.44
CHMP5-202ENST00000419016 NKX1-1Q15270 411 aaPredicted RBP17.82■□□□□ 0.44
CHMP5-202ENST00000419016 ZNF428Q96B54 188 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 NGLY1Q96IV0 654 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 C8orf37Q96NL8 207 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 TSPYL4Q9UJ04 414 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 PCDH11XQ9BZA7 1347 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 PCDH11YQ9BZA8 1340 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 SHANK3Q9BYB0 1731 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 DCAF5Q96JK2 942 aa17.82■□□□□ 0.44
CHMP5-202ENST00000419016 SCN11AQ9UI33 1791 aa17.81■□□□□ 0.44
CHMP5-202ENST00000419016 HSP90AB1P08238 724 aaKnown RBP17.8■□□□□ 0.44
CHMP5-202ENST00000419016 IRX6P78412 446 aaPredicted RBP17.8■□□□□ 0.44
CHMP5-202ENST00000419016 TEFQ10587 303 aa17.8■□□□□ 0.44
CHMP5-202ENST00000419016 VPS72Q15906 364 aa17.8■□□□□ 0.44
CHMP5-202ENST00000419016 SIPA1L3O60292 1781 aaPredicted RBP17.8■□□□□ 0.44
CHMP5-202ENST00000419016 VIRMAQ69YN4 1812 aaKnown RBP17.8■□□□□ 0.44
CHMP5-202ENST00000419016 MRC1P22897 1456 aa17.8■□□□□ 0.44
CHMP5-202ENST00000419016 PLIN1O60240 522 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 KRT24Q2M2I5 525 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 TWISTNBQ3B726 338 aaPredicted RBP17.79■□□□□ 0.44
CHMP5-202ENST00000419016 SSH1Q8WYL5 1049 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 CDCA7Q9BWT1 371 aaPredicted RBP17.79■□□□□ 0.44
CHMP5-202ENST00000419016 WNK3Q9BYP7 1800 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 ALDH1L2Q3SY69 923 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
CHMP5-202ENST00000419016 BRPF1P55201 1214 aaPredicted RBP17.78■□□□□ 0.44
CHMP5-202ENST00000419016 ERICH6BQ5W0A0 696 aa17.78■□□□□ 0.44
CHMP5-202ENST00000419016 SLC52A2Q9HAB3 445 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms