RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 MAP3K5Q99683 1374 aa17.92■□□□□ 0.46
PDLIM4-203ENST00000418373 DDX54Q8TDD1 881 aaKnown RBP17.92■□□□□ 0.46
PDLIM4-203ENST00000418373 AKT1S1Q96B36 256 aa17.92■□□□□ 0.46
PDLIM4-203ENST00000418373 FYB1O15117 783 aa17.91■□□□□ 0.46
PDLIM4-203ENST00000418373 AMPHP49418 695 aa17.91■□□□□ 0.46
PDLIM4-203ENST00000418373 SLC27A3Q5K4L6 730 aa17.91■□□□□ 0.46
PDLIM4-203ENST00000418373 TMF1P82094 1093 aa17.89■□□□□ 0.45
PDLIM4-203ENST00000418373 ANKRD26Q9UPS8 1709 aa17.89■□□□□ 0.45
PDLIM4-203ENST00000418373 PRIM1P49642 420 aaKnown RBP17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 RRS1Q15050 365 aaKnown RBP17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 NBPF6Q5VWK0 638 aa17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 ZCRB1Q8TBF4 217 aaKnown RBP17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 NBPF4Q96M43 638 aa17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 ARXQ96QS3 562 aa17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 GGNBP2Q9H3C7 697 aa17.88■□□□□ 0.45
PDLIM4-203ENST00000418373 PNPLA7Q6ZV29 1317 aa17.87■□□□□ 0.45
PDLIM4-203ENST00000418373 CGNL1Q0VF96 1302 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 INSRP06213 1382 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 KIF24Q5T7B8 1368 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 C5P01031 1676 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 PKD1L3Q7Z443 1732 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 TAF1LQ8IZX4 1826 aa17.86■□□□□ 0.45
PDLIM4-203ENST00000418373 ITGB4P16144 1822 aa17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 KCNQ4P56696 695 aa17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 SMG6Q86US8 1419 aaKnown RBP17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 SLC16A10Q8TF71 515 aa17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 SYTL4Q96C24 671 aaPredicted RBP17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 TOGARAM1Q9Y4F4 1720 aa17.85■□□□□ 0.45
PDLIM4-203ENST00000418373 FLT4P35916 1363 aa17.84■□□□□ 0.45
PDLIM4-203ENST00000418373 USHBP1Q8N6Y0 703 aa17.84■□□□□ 0.45
PDLIM4-203ENST00000418373 TRIM26Q12899 539 aaPredicted RBP17.83■□□□□ 0.44
PDLIM4-203ENST00000418373 HSP90AB2PQ58FF8 381 aa17.83■□□□□ 0.44
PDLIM4-203ENST00000418373 NCAPD2Q15021 1401 aa17.82■□□□□ 0.44
PDLIM4-203ENST00000418373 CDCA8Q53HL2 280 aa17.82■□□□□ 0.44
PDLIM4-203ENST00000418373 CARD14Q9BXL6 1004 aa17.82■□□□□ 0.44
PDLIM4-203ENST00000418373 MAP2P11137 1827 aaKnown RBP17.82■□□□□ 0.44
PDLIM4-203ENST00000418373 RAPGEF4Q8WZA2 1011 aa17.81■□□□□ 0.44
PDLIM4-203ENST00000418373 TFCP2L1Q9NZI6 479 aa17.81■□□□□ 0.44
PDLIM4-203ENST00000418373 ZNF784Q8NCA9 323 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-203ENST00000418373 CCNL1Q9UK58 526 aaPredicted RBP17.8■□□□□ 0.44
PDLIM4-203ENST00000418373 NSD3Q9BZ95 1437 aa17.8■□□□□ 0.44
PDLIM4-203ENST00000418373 PCDH11XQ9BZA7 1347 aa17.79■□□□□ 0.44
PDLIM4-203ENST00000418373 PCDH11YQ9BZA8 1340 aa17.79■□□□□ 0.44
PDLIM4-203ENST00000418373 TATP17735 454 aaPredicted RBP17.78■□□□□ 0.44
PDLIM4-203ENST00000418373 CYP27B1O15528 508 aa17.77■□□□□ 0.44
PDLIM4-203ENST00000418373 POLD1P28340 1107 aa17.77■□□□□ 0.44
PDLIM4-203ENST00000418373 EMILIN1Q9Y6C2 1016 aa17.77■□□□□ 0.44
PDLIM4-203ENST00000418373 UBR3Q6ZT12 1888 aa17.76■□□□□ 0.43
PDLIM4-203ENST00000418373 C4BP0C0L5 1744 aa17.75■□□□□ 0.43
PDLIM4-203ENST00000418373 COL23A1Q86Y22 540 aaPredicted RBP17.75■□□□□ 0.43
PDLIM4-203ENST00000418373 TIMELESSQ9UNS1 1208 aa17.75■□□□□ 0.43
PDLIM4-203ENST00000418373 PALLDQ8WX93 1383 aa17.75■□□□□ 0.43
PDLIM4-203ENST00000418373 NLGN2Q8NFZ4 835 aa17.73■□□□□ 0.43
PDLIM4-203ENST00000418373 WASHC2AQ641Q2 1341 aa17.72■□□□□ 0.43
PDLIM4-203ENST00000418373 NKX1-1Q15270 411 aaPredicted RBP17.71■□□□□ 0.43
PDLIM4-203ENST00000418373 GPR162Q16538 588 aa17.71■□□□□ 0.43
PDLIM4-203ENST00000418373 MPRIPQ6WCQ1 1025 aa17.71■□□□□ 0.43
PDLIM4-203ENST00000418373 KLHL34Q8N239 644 aa17.71■□□□□ 0.43
PDLIM4-203ENST00000418373 CLSPNQ9HAW4 1339 aa17.7■□□□□ 0.42
PDLIM4-203ENST00000418373 AMIGO3Q86WK7 504 aa17.68■□□□□ 0.42
PDLIM4-203ENST00000418373 PIGBQ92521 554 aa17.68■□□□□ 0.42
PDLIM4-203ENST00000418373 EYA1Q99502 592 aa17.68■□□□□ 0.42
PDLIM4-203ENST00000418373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.68■□□□□ 0.42
PDLIM4-203ENST00000418373 POLKQ9UBT6 870 aa17.68■□□□□ 0.42
PDLIM4-203ENST00000418373 PPM1GO15355 546 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 MSH5O43196 834 aa17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 YBX3P16989 372 aaKnown RBP eCLIP17.67■□□□□ 0.427e-7■■□□□ 13.4
PDLIM4-203ENST00000418373 HMGB2P26583 209 aaKnown RBP17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 MSL1Q68DK7 614 aa17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 FLAD1Q8NFF5 587 aa17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 SMARCC1Q92922 1105 aaPredicted RBP17.67■□□□□ 0.42
PDLIM4-203ENST00000418373 PLEKHG2Q9H7P9 1386 aa17.66■□□□□ 0.42
PDLIM4-203ENST00000418373 SPG7Q9UQ90 795 aa17.66■□□□□ 0.42
PDLIM4-203ENST00000418373 ZNF831Q5JPB2 1677 aa17.64■□□□□ 0.42
PDLIM4-203ENST00000418373 PELP1Q8IZL8 1130 aaKnown RBP17.64■□□□□ 0.41
PDLIM4-203ENST00000418373 CD2APQ9Y5K6 639 aa17.63■□□□□ 0.41
PDLIM4-203ENST00000418373 COL5A3P25940 1745 aaPredicted RBP17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 LOC102724428A0A0B4J2F2 783 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 PHKG2P15735 406 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 SIK1P57059 783 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 C1QTNF8P60827 252 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 EIF4A2Q14240 407 aaKnown RBP17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 LINC00116Q8NCU8 138 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 AK7Q96M32 723 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 CEP350Q5VT06 3117 aa17.62■□□□□ 0.41
PDLIM4-203ENST00000418373 GRIN3BO60391 1043 aa17.61■□□□□ 0.41
PDLIM4-203ENST00000418373 IFNL2Q8IZJ0 200 aa17.61■□□□□ 0.41
PDLIM4-203ENST00000418373 IGSF1Q8N6C5 1336 aa17.61■□□□□ 0.41
PDLIM4-203ENST00000418373 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 SSFA2P28290 1259 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 SMIM5Q71RC9 77 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 TMOD3Q9NYL9 352 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 ASAP1Q9ULH1 1129 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 KDRP35968 1356 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 KIF13BQ9NQT8 1826 aa17.6■□□□□ 0.41
PDLIM4-203ENST00000418373 ITPK1Q13572 414 aa17.59■□□□□ 0.41
PDLIM4-203ENST00000418373 KIAA1551Q9HCM1 1747 aa17.58■□□□□ 0.41
PDLIM4-203ENST00000418373 PHF14O94880 888 aa17.58■□□□□ 0.4
PDLIM4-203ENST00000418373 TNNT2P45379 298 aaPredicted RBP17.58■□□□□ 0.4
PDLIM4-203ENST00000418373 ATG3Q9NT62 314 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms