RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 PLSCR1O15162 318 aa28.29■■■□□ 2.12
PKNOX1-202ENST00000418336 PPM1GO15355 546 aaPredicted RBP28.28■■■□□ 2.12
PKNOX1-202ENST00000418336 EYA1Q99502 592 aa28.28■■■□□ 2.12
PKNOX1-202ENST00000418336 PKD1L3Q7Z443 1732 aa28.28■■■□□ 2.12
PKNOX1-202ENST00000418336 EIF4A2Q14240 407 aaKnown RBP28.27■■■□□ 2.12
PKNOX1-202ENST00000418336 MORC1Q86VD1 984 aa28.27■■■□□ 2.12
PKNOX1-202ENST00000418336 PROM2Q8N271 834 aa28.26■■■□□ 2.11
PKNOX1-202ENST00000418336 NPC1L1Q9UHC9 1359 aa28.25■■■□□ 2.11
PKNOX1-202ENST00000418336 ZCRB1Q8TBF4 217 aaKnown RBP28.25■■■□□ 2.11
PKNOX1-202ENST00000418336 BTAF1O14981 1849 aa28.24■■■□□ 2.11
PKNOX1-202ENST00000418336 DDX54Q8TDD1 881 aaKnown RBP28.23■■■□□ 2.11
PKNOX1-202ENST00000418336 ACSBG1Q96GR2 724 aa28.23■■■□□ 2.11
PKNOX1-202ENST00000418336 DOT1LQ8TEK3 1739 aa28.23■■■□□ 2.11
PKNOX1-202ENST00000418336 IGSF1Q8N6C5 1336 aa28.21■■■□□ 2.11
PKNOX1-202ENST00000418336 RAPGEF4Q8WZA2 1011 aa28.2■■■□□ 2.1
PKNOX1-202ENST00000418336 PSDA5PKW4 1024 aaPredicted RBP28.19■■■□□ 2.1
PKNOX1-202ENST00000418336 TATP17735 454 aaPredicted RBP28.19■■■□□ 2.1
PKNOX1-202ENST00000418336 CYP27B1O15528 508 aa28.17■■■□□ 2.1
PKNOX1-202ENST00000418336 TOGARAM1Q9Y4F4 1720 aa28.17■■■□□ 2.1
PKNOX1-202ENST00000418336 PAPPAQ13219 1627 aa28.15■■■□□ 2.1
PKNOX1-202ENST00000418336 R3HDM1Q15032 1099 aaKnown RBP28.15■■■□□ 2.1
PKNOX1-202ENST00000418336 CC2D1BQ5T0F9 858 aaKnown RBP28.15■■■□□ 2.1
PKNOX1-202ENST00000418336 PLEKHG2Q9H7P9 1386 aa28.14■■■□□ 2.1
PKNOX1-202ENST00000418336 ANO8Q9HCE9 1232 aaPredicted RBP28.14■■■□□ 2.1
PKNOX1-202ENST00000418336 PCDH11XQ9BZA7 1347 aa28.14■■■□□ 2.09
PKNOX1-202ENST00000418336 PCDH11YQ9BZA8 1340 aa28.14■■■□□ 2.09
PKNOX1-202ENST00000418336 IL13P35225 146 aa28.13■■■□□ 2.09
PKNOX1-202ENST00000418336 LRP5O75197 1615 aa28.12■■■□□ 2.09
PKNOX1-202ENST00000418336 TXNRD1Q16881 649 aa28.12■■■□□ 2.09
PKNOX1-202ENST00000418336 COL3A1P02461 1466 aaPredicted RBP28.11■■■□□ 2.09
PKNOX1-202ENST00000418336 PRIM1P49642 420 aaKnown RBP28.11■■■□□ 2.09
PKNOX1-202ENST00000418336 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.11■■■□□ 2.09
PKNOX1-202ENST00000418336 MTHFSP49914 203 aa28.1■■■□□ 2.09
PKNOX1-202ENST00000418336 NKX1-1Q15270 411 aaPredicted RBP28.1■■■□□ 2.09
PKNOX1-202ENST00000418336 KDRP35968 1356 aa28.09■■■□□ 2.09
PKNOX1-202ENST00000418336 LY75O60449 1722 aa28.09■■■□□ 2.09
PKNOX1-202ENST00000418336 KAT6BQ8WYB5 2073 aa28.08■■■□□ 2.09
PKNOX1-202ENST00000418336 AEBP1Q8IUX7 1158 aa28.08■■■□□ 2.09
PKNOX1-202ENST00000418336 LRRC4BQ9NT99 713 aa28.06■■■□□ 2.08
PKNOX1-202ENST00000418336 CASZ1Q86V15 1759 aa28.06■■■□□ 2.08
PKNOX1-202ENST00000418336 ITGB4P16144 1822 aa28.06■■■□□ 2.08
PKNOX1-202ENST00000418336 PHKG2P15735 406 aa28.03■■■□□ 2.08
PKNOX1-202ENST00000418336 NBPF14Q5TI25 921 aa28.03■■■□□ 2.08
PKNOX1-202ENST00000418336 SPG7Q9UQ90 795 aa28.03■■■□□ 2.08
PKNOX1-202ENST00000418336 SYTL4Q96C24 671 aaPredicted RBP28■■■□□ 2.07
PKNOX1-202ENST00000418336 SULT6B1Q6IMI4 303 aa27.99■■■□□ 2.07
PKNOX1-202ENST00000418336 PDGFDQ9GZP0 370 aaPredicted RBP27.98■■■□□ 2.07
PKNOX1-202ENST00000418336 IFNL2Q8IZJ0 200 aa27.97■■■□□ 2.07
PKNOX1-202ENST00000418336 CNGB1Q14028 1251 aaPredicted RBP27.96■■■□□ 2.07
PKNOX1-202ENST00000418336 SLC15A2Q16348 729 aa27.96■■■□□ 2.07
PKNOX1-202ENST00000418336 KDM6AO15550 1401 aaPredicted RBP27.95■■■□□ 2.07
PKNOX1-202ENST00000418336 ZNF827Q17R98 1081 aa27.95■■■□□ 2.06
PKNOX1-202ENST00000418336 SLC27A3Q5K4L6 730 aa27.95■■■□□ 2.06
PKNOX1-202ENST00000418336 PIGBQ92521 554 aa27.95■■■□□ 2.06
PKNOX1-202ENST00000418336 KCNQ4P56696 695 aa27.94■■■□□ 2.06
PKNOX1-202ENST00000418336 AKT1S1Q96B36 256 aa27.94■■■□□ 2.06
PKNOX1-202ENST00000418336 DIAPH1O60610 1272 aaKnown RBP27.93■■■□□ 2.06
PKNOX1-202ENST00000418336 TUBGCP6Q96RT7 1819 aa27.92■■■□□ 2.06
PKNOX1-202ENST00000418336 PPP2R1AP30153 589 aa27.92■■■□□ 2.06
PKNOX1-202ENST00000418336 QSER1Q2KHR3 1735 aa27.92■■■□□ 2.06
PKNOX1-202ENST00000418336 AMOTQ4VCS5 1084 aa27.91■■■□□ 2.06
PKNOX1-202ENST00000418336 PLEKHO1Q53GL0 409 aaPredicted RBP27.91■■■□□ 2.06
PKNOX1-202ENST00000418336 MPRIPQ6WCQ1 1025 aa27.91■■■□□ 2.06
PKNOX1-202ENST00000418336 STK32BQ9NY57 414 aa27.9■■■□□ 2.06
PKNOX1-202ENST00000418336 PALLDQ8WX93 1383 aa27.89■■■□□ 2.06
PKNOX1-202ENST00000418336 TAF1LQ8IZX4 1826 aa27.89■■■□□ 2.06
PKNOX1-202ENST00000418336 HMOX1P09601 288 aa27.88■■■□□ 2.05
PKNOX1-202ENST00000418336 ZNF530Q6P9A1 599 aaPredicted RBP27.88■■■□□ 2.05
PKNOX1-202ENST00000418336 ADAMTS7Q9UKP4 1686 aa27.87■■■□□ 2.05
PKNOX1-202ENST00000418336 C5P01031 1676 aa27.87■■■□□ 2.05
PKNOX1-202ENST00000418336 DCAF5Q96JK2 942 aa27.86■■■□□ 2.05
PKNOX1-202ENST00000418336 CCNL1Q9UK58 526 aaPredicted RBP27.85■■■□□ 2.05
PKNOX1-202ENST00000418336 SCN11AQ9UI33 1791 aa27.84■■■□□ 2.05
PKNOX1-202ENST00000418336 ASAP1Q9ULH1 1129 aa27.84■■■□□ 2.05
PKNOX1-202ENST00000418336 ERVV-2B6SEH9 535 aa27.83■■■□□ 2.05
PKNOX1-202ENST00000418336 COL24A1Q17RW2 1714 aa27.82■■■□□ 2.04
PKNOX1-202ENST00000418336 ATG3Q9NT62 314 aa27.82■■■□□ 2.04
PKNOX1-202ENST00000418336 TMOD3Q9NYL9 352 aa27.82■■■□□ 2.04
PKNOX1-202ENST00000418336 PNPLA7Q6ZV29 1317 aa27.82■■■□□ 2.04
PKNOX1-202ENST00000418336 HSP90AB1P08238 724 aaKnown RBP27.81■■■□□ 2.04
PKNOX1-202ENST00000418336 MRC1P22897 1456 aa27.81■■■□□ 2.04
PKNOX1-202ENST00000418336 MTHFSDQ2M296 383 aaKnown RBP27.8■■■□□ 2.04
PKNOX1-202ENST00000418336 SMARCC1Q92922 1105 aaPredicted RBP27.8■■■□□ 2.04
PKNOX1-202ENST00000418336 SGIP1Q9BQI5 828 aa27.8■■■□□ 2.04
PKNOX1-202ENST00000418336 ZNF831Q5JPB2 1677 aa27.79■■■□□ 2.04
PKNOX1-202ENST00000418336 PTGER2P43116 358 aa27.79■■■□□ 2.04
PKNOX1-202ENST00000418336 AKAP4Q5JQC9 854 aa27.79■■■□□ 2.04
PKNOX1-202ENST00000418336 VIRMAQ69YN4 1812 aaKnown RBP27.78■■■□□ 2.04
PKNOX1-202ENST00000418336 C4BP0C0L5 1744 aa27.78■■■□□ 2.04
PKNOX1-202ENST00000418336 SPON1Q9HCB6 807 aa27.78■■■□□ 2.04
PKNOX1-202ENST00000418336 ZBTB7AO95365 584 aa27.77■■■□□ 2.04
PKNOX1-202ENST00000418336 DDX10Q13206 875 aaKnown RBP27.77■■■□□ 2.04
PKNOX1-202ENST00000418336 SLC4A9Q96Q91 983 aa27.77■■■□□ 2.04
PKNOX1-202ENST00000418336 C1orf141Q5JVX7 400 aa27.76■■■□□ 2.03
PKNOX1-202ENST00000418336 RSPH6AQ9H0K4 717 aa27.76■■■□□ 2.03
PKNOX1-202ENST00000418336 LOC102724428A0A0B4J2F2 783 aa27.75■■■□□ 2.03
PKNOX1-202ENST00000418336 U2SURPO15042 1029 aaKnown RBP27.75■■■□□ 2.03
PKNOX1-202ENST00000418336 SIK1P57059 783 aa27.75■■■□□ 2.03
PKNOX1-202ENST00000418336 ITPK1Q13572 414 aa27.75■■■□□ 2.03
PKNOX1-202ENST00000418336 AMIGO3Q86WK7 504 aa27.75■■■□□ 2.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms