RNA–Protein interactions for RNA: ENST00000418224.7

PMS1-206, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 3,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-206ENST00000418224 POGZQ7Z3K3 1410 aa21.33■■□□□ 1
PMS1-206ENST00000418224 HMGN5P82970 282 aaKnown RBP21.32■■□□□ 1
PMS1-206ENST00000418224 PRIMPOLQ96LW4 560 aa21.32■■□□□ 1
PMS1-206ENST00000418224 NAP1L2Q9ULW6 460 aaPredicted RBP21.32■■□□□ 1
PMS1-206ENST00000418224 VGLL3A8MV65 326 aa21.32■■□□□ 1
PMS1-206ENST00000418224 TTC12Q9H892 705 aaPredicted RBP21.32■■□□□ 1
PMS1-206ENST00000418224 TPRNQ4KMQ1 711 aa21.31■■□□□ 1
PMS1-206ENST00000418224 SIRT2Q8IXJ6 389 aa21.31■■□□□ 1
PMS1-206ENST00000418224 HECW2Q9P2P5 1572 aa21.31■■□□□ 1
PMS1-206ENST00000418224 RABEP1Q15276 862 aa21.31■■□□□ 1
PMS1-206ENST00000418224 NFE2L2Q16236 605 aa21.31■■□□□ 1
PMS1-206ENST00000418224 FOXD4L6Q3SYB3 417 aaPredicted RBP21.31■■□□□ 1
PMS1-206ENST00000418224 FOXD4L3Q6VB84 417 aaPredicted RBP21.31■■□□□ 1
PMS1-206ENST00000418224 PDCL2Q8N4E4 241 aa21.31■■□□□ 1
PMS1-206ENST00000418224 BCL2L12Q9HB09 334 aa21.31■■□□□ 1
PMS1-206ENST00000418224 CGNQ9P2M7 1197 aaKnown RBP21.31■■□□□ 1
PMS1-206ENST00000418224 ZNF428Q96B54 188 aa21.3■■□□□ 1
PMS1-206ENST00000418224 POLKQ9UBT6 870 aa21.3■■□□□ 1
PMS1-206ENST00000418224 ZDHHC9Q9Y397 364 aa21.3■■□□□ 1
PMS1-206ENST00000418224 CDC45O75419 566 aa21.3■■□□□ 1
PMS1-206ENST00000418224 U2AF2P26368 475 aaKnown RBP eCLIP21.3■■□□□ 12e-7■■■■□ 24.4
PMS1-206ENST00000418224 LRRC7Q96NW7 1537 aa21.3■■□□□ 1
PMS1-206ENST00000418224 ZBTB22O15209 634 aa21.29■■□□□ 1
PMS1-206ENST00000418224 TSPY26PQ9H489 355 aa21.29■■□□□ 1
PMS1-206ENST00000418224 MBIPQ9NS73 344 aa21.29■■□□□ 1
PMS1-206ENST00000418224 GNAI1P63096 354 aa21.29■■□□□ 1
PMS1-206ENST00000418224 TWISTNBQ3B726 338 aaPredicted RBP21.29■■□□□ 1
PMS1-206ENST00000418224 CFAP74Q9C0B2 1584 aa21.28■■□□□ 1
PMS1-206ENST00000418224 PNPLA6Q8IY17 1366 aa21.28■■□□□ 1
PMS1-206ENST00000418224 SIGLEC1Q9BZZ2 1709 aa21.28■■□□□ 1
PMS1-206ENST00000418224 CD163L1Q9NR16 1453 aa21.28■■□□□ 1
PMS1-206ENST00000418224 TMEM51Q9NW97 253 aa21.28■■□□□ 1
PMS1-206ENST00000418224 ZNF771Q7L3S4 317 aaPredicted RBP21.28■■□□□ 1
PMS1-206ENST00000418224 EMILIN1Q9Y6C2 1016 aa21.28■■□□□ 1
PMS1-206ENST00000418224 MLH3Q9UHC1 1453 aa21.27■■□□□ 1
PMS1-206ENST00000418224 PIBF1Q8WXW3 757 aa21.27■■□□□ 1
PMS1-206ENST00000418224 ARHGAP45Q92619 1136 aa21.27■■□□□ 1
PMS1-206ENST00000418224 MED14O60244 1454 aa21.27■□□□□ 0.99
PMS1-206ENST00000418224 APBB1O00213 710 aa21.26■□□□□ 0.99
PMS1-206ENST00000418224 STAG3Q9UJ98 1225 aa21.26■□□□□ 0.99
PMS1-206ENST00000418224 USP25Q9UHP3 1055 aa21.26■□□□□ 0.99
PMS1-206ENST00000418224 BRPF1P55201 1214 aaPredicted RBP21.26■□□□□ 0.99
PMS1-206ENST00000418224 PLCB2Q00722 1185 aa21.25■□□□□ 0.99
PMS1-206ENST00000418224 C8orf58Q8NAV2 365 aa21.25■□□□□ 0.99
PMS1-206ENST00000418224 CWC22Q9HCG8 908 aaKnown RBP21.25■□□□□ 0.99
PMS1-206ENST00000418224 SLC52A1Q9NWF4 448 aa21.25■□□□□ 0.99
PMS1-206ENST00000418224 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
PMS1-206ENST00000418224 YTHDC2Q9H6S0 1430 aaKnown RBP21.25■□□□□ 0.99
PMS1-206ENST00000418224 GSPT1P15170 499 aaKnown RBP21.25■□□□□ 0.99
PMS1-206ENST00000418224 PTPRMP28827 1452 aa21.24■□□□□ 0.99
PMS1-206ENST00000418224 IFT57Q9NWB7 429 aa21.24■□□□□ 0.99
PMS1-206ENST00000418224 ZFYVE9O95405 1425 aa21.24■□□□□ 0.99
PMS1-206ENST00000418224 FAM83GA6ND36 823 aa21.24■□□□□ 0.99
PMS1-206ENST00000418224 ARHGAP31Q2M1Z3 1444 aa21.24■□□□□ 0.99
PMS1-206ENST00000418224 GTF2F1P35269 517 aaKnown RBP eCLIP21.23■□□□□ 0.99
PMS1-206ENST00000418224 DCTN1Q14203 1278 aa21.23■□□□□ 0.99
PMS1-206ENST00000418224 ABCC4O15439 1325 aa21.23■□□□□ 0.99
PMS1-206ENST00000418224 C16orf71Q8IYS4 520 aaPredicted RBP21.23■□□□□ 0.99
PMS1-206ENST00000418224 MAPK8IP2Q13387 824 aaPredicted RBP21.23■□□□□ 0.99
PMS1-206ENST00000418224 WAPLQ7Z5K2 1190 aa21.23■□□□□ 0.99
PMS1-206ENST00000418224 API5Q9BZZ5 524 aaKnown RBP21.23■□□□□ 0.99
PMS1-206ENST00000418224 PTCH1Q13635 1447 aa21.22■□□□□ 0.99
PMS1-206ENST00000418224 MBD3O95983 291 aa21.22■□□□□ 0.99
PMS1-206ENST00000418224 PLEKHM2Q8IWE5 1019 aa21.22■□□□□ 0.99
PMS1-206ENST00000418224 ST18O60284 1047 aa21.21■□□□□ 0.99
PMS1-206ENST00000418224 GDPD2Q9HCC8 539 aa21.21■□□□□ 0.99
PMS1-206ENST00000418224 ZRANB1Q9UGI0 708 aa21.21■□□□□ 0.99
PMS1-206ENST00000418224 PIK3C2BO00750 1634 aa21.2■□□□□ 0.98
PMS1-206ENST00000418224 PLCD3Q8N3E9 789 aa21.2■□□□□ 0.98
PMS1-206ENST00000418224 USP26Q9BXU7 913 aa21.2■□□□□ 0.98
PMS1-206ENST00000418224 FBXO31Q5XUX0 539 aaPredicted RBP21.2■□□□□ 0.98
PMS1-206ENST00000418224 PIK3R4Q99570 1358 aa21.19■□□□□ 0.98
PMS1-206ENST00000418224 ADCY5O95622 1261 aa21.19■□□□□ 0.98
PMS1-206ENST00000418224 NME9Q86XW9 330 aa21.19■□□□□ 0.98
PMS1-206ENST00000418224 ANKRD26Q9UPS8 1709 aa21.19■□□□□ 0.98
PMS1-206ENST00000418224 RIOK3O14730 519 aaKnown RBP21.19■□□□□ 0.98
PMS1-206ENST00000418224 OTUD7AQ8TE49 926 aaPredicted RBP21.19■□□□□ 0.98
PMS1-206ENST00000418224 RRS1Q15050 365 aaKnown RBP21.18■□□□□ 0.98
PMS1-206ENST00000418224 NOL8Q76FK4 1167 aaKnown RBP21.18■□□□□ 0.98
PMS1-206ENST00000418224 CFAP44Q96MT7 982 aa21.18■□□□□ 0.98
PMS1-206ENST00000418224 CDK11BP21127 795 aaKnown RBP21.18■□□□□ 0.98
PMS1-206ENST00000418224 TTC22Q5TAA0 569 aa21.18■□□□□ 0.98
PMS1-206ENST00000418224 FKBP5Q13451 457 aaPredicted RBP21.17■□□□□ 0.98
PMS1-206ENST00000418224 SMARCA5O60264 1052 aaPredicted RBP21.17■□□□□ 0.98
PMS1-206ENST00000418224 ZNF853P0CG23 659 aa21.17■□□□□ 0.98
PMS1-206ENST00000418224 IL13P35225 146 aa21.17■□□□□ 0.98
PMS1-206ENST00000418224 CHAF1AQ13111 956 aaPredicted RBP21.16■□□□□ 0.98
PMS1-206ENST00000418224 LMOD3Q0VAK6 560 aa21.16■□□□□ 0.98
PMS1-206ENST00000418224 DCTPP1Q9H773 170 aa21.16■□□□□ 0.98
PMS1-206ENST00000418224 SYAP1Q96A49 352 aaPredicted RBP21.15■□□□□ 0.98
PMS1-206ENST00000418224 MYO5BQ9ULV0 1848 aa21.15■□□□□ 0.98
PMS1-206ENST00000418224 GADD45BO75293 160 aaPredicted RBP21.15■□□□□ 0.98
PMS1-206ENST00000418224 KRT24Q2M2I5 525 aa21.15■□□□□ 0.98
PMS1-206ENST00000418224 INTS3Q68E01 1043 aaKnown RBP21.15■□□□□ 0.98
PMS1-206ENST00000418224 PDIA4P13667 645 aaKnown RBP21.15■□□□□ 0.98
PMS1-206ENST00000418224 CASC1Q6TDU7 716 aa21.13■□□□□ 0.97
PMS1-206ENST00000418224 ARHGEF40Q8TER5 1519 aa21.13■□□□□ 0.97
PMS1-206ENST00000418224 KIF20BQ96Q89 1820 aa21.13■□□□□ 0.97
PMS1-206ENST00000418224 TAF3Q5VWG9 929 aa21.13■□□□□ 0.97
PMS1-206ENST00000418224 DIAPH3Q9NSV4 1193 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms