RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 MARCH10Q8NA82 808 aaPredicted RBP9.25□□□□□ -0.93
NCL-203ENST00000417652 SYTL4Q96C24 671 aaPredicted RBP9.25□□□□□ -0.93
NCL-203ENST00000417652 NUDCQ9Y266 331 aa9.25□□□□□ -0.93
NCL-203ENST00000417652 FAM208AQ9UK61 1670 aaKnown RBP9.24□□□□□ -0.93
NCL-203ENST00000417652 THSD7AQ9UPZ6 1657 aa9.24□□□□□ -0.93
NCL-203ENST00000417652 SULT6B1Q6IMI4 303 aa9.24□□□□□ -0.93
NCL-203ENST00000417652 ACSBG1Q96GR2 724 aa9.24□□□□□ -0.93
NCL-203ENST00000417652 PEAK1Q9H792 1746 aa9.24□□□□□ -0.93
NCL-203ENST00000417652 RGPD2P0DJD1 1756 aa9.24□□□□□ -0.93
NCL-203ENST00000417652 OVOS2A0A0G2JMS6 1433 aa9.23□□□□□ -0.93
NCL-203ENST00000417652 PPP2R1AP30153 589 aa9.23□□□□□ -0.93
NCL-203ENST00000417652 RALBP1Q15311 655 aa9.23□□□□□ -0.93
NCL-203ENST00000417652 PLEKHO1Q53GL0 409 aaPredicted RBP9.23□□□□□ -0.93
NCL-203ENST00000417652 DEFB132Q7Z7B7 95 aa9.23□□□□□ -0.93
NCL-203ENST00000417652 PARP4Q9UKK3 1724 aaKnown RBP9.22□□□□□ -0.93
NCL-203ENST00000417652 HMOX1P09601 288 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 IL13P35225 146 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 EN1Q05925 392 aaPredicted RBP9.22□□□□□ -0.93
NCL-203ENST00000417652 BCL11BQ9C0K0 894 aaPredicted RBP9.22□□□□□ -0.93
NCL-203ENST00000417652 PCDH11XQ9BZA7 1347 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 PCDH11YQ9BZA8 1340 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 DISP2A7MBM2 1401 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 TNS2Q63HR2 1409 aa9.22□□□□□ -0.93
NCL-203ENST00000417652 NEFMP07197 916 aa9.21□□□□□ -0.94
NCL-203ENST00000417652 AMOTQ4VCS5 1084 aa9.21□□□□□ -0.94
NCL-203ENST00000417652 NCBP3Q53F19 620 aaKnown RBP9.21□□□□□ -0.94
NCL-203ENST00000417652 C1orf141Q5JVX7 400 aa9.21□□□□□ -0.94
NCL-203ENST00000417652 POTEHQ6S545 545 aa9.21□□□□□ -0.94
NCL-203ENST00000417652 EP400Q96L91 3159 aa9.21□□□□□ -0.94
NCL-203ENST00000417652 U2AF1L5P0DN76 240 aaPredicted RBP9.2□□□□□ -0.94
NCL-203ENST00000417652 PRIM1P49642 420 aaKnown RBP9.2□□□□□ -0.94
NCL-203ENST00000417652 U2AF1Q01081 240 aaKnown RBP eCLIP9.2□□□□□ -0.949e-16■□□□□ 10.6
NCL-203ENST00000417652 ZNF530Q6P9A1 599 aaPredicted RBP9.2□□□□□ -0.94
NCL-203ENST00000417652 IFNL2Q8IZJ0 200 aa9.2□□□□□ -0.94
NCL-203ENST00000417652 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.2□□□□□ -0.943e-16■■■□□ 19.2
NCL-203ENST00000417652 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
NCL-203ENST00000417652 LRRC37A3O60309 1634 aa9.2□□□□□ -0.94
NCL-203ENST00000417652 WNK3Q9BYP7 1800 aa9.19□□□□□ -0.94
NCL-203ENST00000417652 KCNQ2O43526 872 aa9.19□□□□□ -0.94
NCL-203ENST00000417652 HSP90AB1P08238 724 aaKnown RBP9.19□□□□□ -0.94
NCL-203ENST00000417652 EZH2Q15910 746 aaKnown RBP9.19□□□□□ -0.94
NCL-203ENST00000417652 NBPF14Q5TI25 921 aa9.19□□□□□ -0.94
NCL-203ENST00000417652 AEBP1Q8IUX7 1158 aa9.19□□□□□ -0.94
NCL-203ENST00000417652 MEGF6O75095 1541 aa9.19□□□□□ -0.94
NCL-203ENST00000417652 ANP32CO43423 234 aa9.18□□□□□ -0.94
NCL-203ENST00000417652 RGPD1P0DJD0 1748 aa9.18□□□□□ -0.94
NCL-203ENST00000417652 MPRIPQ6WCQ1 1025 aa9.18□□□□□ -0.94
NCL-203ENST00000417652 CYP27B1O15528 508 aa9.17□□□□□ -0.94
NCL-203ENST00000417652 PHKG2P15735 406 aa9.17□□□□□ -0.94
NCL-203ENST00000417652 PTF1AQ7RTS3 328 aa9.17□□□□□ -0.94
NCL-203ENST00000417652 PNNQ9H307 717 aaKnown RBP9.17□□□□□ -0.94
NCL-203ENST00000417652 PARD3Q8TEW0 1356 aa9.16□□□□□ -0.94
NCL-203ENST00000417652 MYBBP1AQ9BQG0 1328 aaKnown RBP9.16□□□□□ -0.94
NCL-203ENST00000417652 PLSCR1O15162 318 aa9.16□□□□□ -0.94
NCL-203ENST00000417652 CABP4P57796 275 aa9.16□□□□□ -0.94
NCL-203ENST00000417652 WDR43Q15061 677 aaKnown RBP eCLIP9.16□□□□□ -0.942e-6■■□□□ 12.4
NCL-203ENST00000417652 CAMKK2Q96RR4 588 aa9.16□□□□□ -0.94
NCL-203ENST00000417652 TMOD3Q9NYL9 352 aa9.16□□□□□ -0.94
NCL-203ENST00000417652 BCL9O00512 1426 aa9.15□□□□□ -0.94
NCL-203ENST00000417652 FCHSD2O94868 740 aa9.15□□□□□ -0.94
NCL-203ENST00000417652 KCNA4P22459 653 aa9.15□□□□□ -0.94
NCL-203ENST00000417652 PRKAR2BP31323 418 aa9.15□□□□□ -0.94
NCL-203ENST00000417652 DCAF5Q96JK2 942 aa9.15□□□□□ -0.94
NCL-203ENST00000417652 PRKRIP1Q9H875 184 aaPredicted RBP9.15□□□□□ -0.94
NCL-203ENST00000417652 SBF2Q86WG5 1849 aa9.15□□□□□ -0.95
NCL-203ENST00000417652 NKX1-1Q15270 411 aaPredicted RBP9.14□□□□□ -0.95
NCL-203ENST00000417652 TXNRD1Q16881 649 aa9.14□□□□□ -0.95
NCL-203ENST00000417652 AKAP4Q5JQC9 854 aa9.14□□□□□ -0.95
NCL-203ENST00000417652 GAS2L2Q8NHY3 880 aa9.14□□□□□ -0.95
NCL-203ENST00000417652 RTF1Q92541 710 aaKnown RBP9.14□□□□□ -0.95
NCL-203ENST00000417652 SMARCC1Q92922 1105 aaPredicted RBP9.14□□□□□ -0.95
NCL-203ENST00000417652 NCAPD2Q15021 1401 aa9.14□□□□□ -0.95
NCL-203ENST00000417652 MAPK8IP3Q9UPT6 1336 aa9.13□□□□□ -0.95
NCL-203ENST00000417652 PSDA5PKW4 1024 aaPredicted RBP9.13□□□□□ -0.95
NCL-203ENST00000417652 ERVV-2B6SEH9 535 aa9.13□□□□□ -0.95
NCL-203ENST00000417652 HMGB2P26583 209 aaKnown RBP9.13□□□□□ -0.95
NCL-203ENST00000417652 MTHFSDQ2M296 383 aaKnown RBP9.13□□□□□ -0.95
NCL-203ENST00000417652 STK32BQ9NY57 414 aa9.13□□□□□ -0.95
NCL-203ENST00000417652 KDRP35968 1356 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 PLEKHG2Q9H7P9 1386 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 GNAT3A8MTJ3 354 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 TEFQ10587 303 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 R3HDM1Q15032 1099 aaKnown RBP9.12□□□□□ -0.95
NCL-203ENST00000417652 SLC27A3Q5K4L6 730 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 PIGBQ92521 554 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 RSPH6AQ9H0K4 717 aa9.12□□□□□ -0.95
NCL-203ENST00000417652 CCNL1Q9UK58 526 aaPredicted RBP9.12□□□□□ -0.95
NCL-203ENST00000417652 TNS1Q9HBL0 1735 aaKnown RBP9.11□□□□□ -0.95
NCL-203ENST00000417652 NFATC2IPQ8NCF5 419 aa9.11□□□□□ -0.95
NCL-203ENST00000417652 PHACTR3Q96KR7 559 aa9.11□□□□□ -0.95
NCL-203ENST00000417652 RBM42Q9BTD8 480 aaKnown RBP9.11□□□□□ -0.95
NCL-203ENST00000417652 PKD1L3Q7Z443 1732 aa9.11□□□□□ -0.95
NCL-203ENST00000417652 NHSQ6T4R5 1651 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 BTAF1O14981 1849 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 COL3A1P02461 1466 aaPredicted RBP9.1□□□□□ -0.95
NCL-203ENST00000417652 RNMTO43148 476 aaKnown RBP9.1□□□□□ -0.95
NCL-203ENST00000417652 KCNQ4P56696 695 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 PROM2Q8N271 834 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 LGR6Q9HBX8 967 aa9.1□□□□□ -0.95
NCL-203ENST00000417652 ASAP1Q9ULH1 1129 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms