RNA–Protein interactions for RNA: ENST00000417400.1

CITED1-203, Transcript of Cbp/p300 interacting transactivator with Glu/Asp rich carboxy-terminal domain 1, humanhuman

TSL 2

Gene CITED1, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CITED1-203ENST00000417400 CSB-PGBD3P0DP91 1061 aa9.67□□□□□ -0.86
CITED1-203ENST00000417400 NME9Q86XW9 330 aa9.67□□□□□ -0.86
CITED1-203ENST00000417400 UBR3Q6ZT12 1888 aa9.67□□□□□ -0.86
CITED1-203ENST00000417400 USP31Q70CQ4 1352 aa9.66□□□□□ -0.86
CITED1-203ENST00000417400 TTC21AQ8NDW8 1320 aa9.66□□□□□ -0.86
CITED1-203ENST00000417400 KCNQ4P56696 695 aa9.66□□□□□ -0.86
CITED1-203ENST00000417400 MTFR1LQ9H019 292 aa9.66□□□□□ -0.86
CITED1-203ENST00000417400 ROCK2O75116 1388 aaKnown RBP9.65□□□□□ -0.86
CITED1-203ENST00000417400 NSD2O96028 1365 aa9.65□□□□□ -0.86
CITED1-203ENST00000417400 EXOC5O00471 708 aa9.65□□□□□ -0.86
CITED1-203ENST00000417400 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.65□□□□□ -0.86
CITED1-203ENST00000417400 KCNH5Q8NCM2 988 aa9.65□□□□□ -0.86
CITED1-203ENST00000417400 SPOCK2Q92563 424 aa9.65□□□□□ -0.86
CITED1-203ENST00000417400 CDCA7Q9BWT1 371 aaPredicted RBP9.65□□□□□ -0.86
CITED1-203ENST00000417400 KIAA1551Q9HCM1 1747 aa9.65□□□□□ -0.87
CITED1-203ENST00000417400 MAP3K5Q99683 1374 aa9.64□□□□□ -0.87
CITED1-203ENST00000417400 MAP2P11137 1827 aaKnown RBP9.64□□□□□ -0.87
CITED1-203ENST00000417400 MEGF6O75095 1541 aa9.64□□□□□ -0.87
CITED1-203ENST00000417400 PNPLA7Q6ZV29 1317 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 PKD1L3Q7Z443 1732 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 ANKRD24Q8TF21 1146 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 AKT1S1Q96B36 256 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 ARXQ96QS3 562 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 NLRP2Q9NX02 1062 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 A0A1W2PP64 1363 aa9.63□□□□□ -0.87
CITED1-203ENST00000417400 IL2RBP14784 551 aa9.62□□□□□ -0.87
CITED1-203ENST00000417400 FBLN1P23142 703 aa9.62□□□□□ -0.87
CITED1-203ENST00000417400 NLGN2Q8NFZ4 835 aa9.62□□□□□ -0.87
CITED1-203ENST00000417400 ZNF692Q9BU19 519 aaPredicted RBP9.62□□□□□ -0.87
CITED1-203ENST00000417400 GOLGB1Q14789 3259 aaKnown RBP9.62□□□□□ -0.87
CITED1-203ENST00000417400 N4BP2Q86UW6 1770 aaPredicted RBP9.62□□□□□ -0.87
CITED1-203ENST00000417400 C4BP0C0L5 1744 aa9.62□□□□□ -0.87
CITED1-203ENST00000417400 SENP3-EIF4A1A0A087X0R7 540 aa9.61□□□□□ -0.87
CITED1-203ENST00000417400 C1QTNF8P60827 252 aa9.61□□□□□ -0.87
CITED1-203ENST00000417400 IFFO2Q5TF58 517 aa9.61□□□□□ -0.87
CITED1-203ENST00000417400 ZBTB12Q9Y330 459 aaPredicted RBP9.61□□□□□ -0.87
CITED1-203ENST00000417400 EDC4Q6P2E9 1401 aaKnown RBP9.61□□□□□ -0.87
CITED1-203ENST00000417400 ANKRD26Q9UPS8 1709 aa9.61□□□□□ -0.87
CITED1-203ENST00000417400 BRCA1P38398 1863 aaKnown RBP9.6□□□□□ -0.87
CITED1-203ENST00000417400 NEUROD1Q13562 356 aa9.6□□□□□ -0.87
CITED1-203ENST00000417400 KLHL34Q8N239 644 aa9.6□□□□□ -0.87
CITED1-203ENST00000417400 SLC12A5Q9H2X9 1139 aa9.6□□□□□ -0.87
CITED1-203ENST00000417400 VIRMAQ69YN4 1812 aaKnown RBP9.6□□□□□ -0.87
CITED1-203ENST00000417400 KIF13BQ9NQT8 1826 aa9.6□□□□□ -0.87
CITED1-203ENST00000417400 YBX3P16989 372 aaKnown RBP eCLIP9.59□□□□□ -0.87
CITED1-203ENST00000417400 TPRNQ4KMQ1 711 aa9.59□□□□□ -0.87
CITED1-203ENST00000417400 LTV1Q96GA3 475 aaPredicted RBP9.59□□□□□ -0.87
CITED1-203ENST00000417400 ECM2O94769 699 aaPredicted RBP9.58□□□□□ -0.88
CITED1-203ENST00000417400 PAXIP1Q6ZW49 1069 aaPredicted RBP9.58□□□□□ -0.88
CITED1-203ENST00000417400 DDX54Q8TDD1 881 aaKnown RBP9.58□□□□□ -0.88
CITED1-203ENST00000417400 ANKRD36BQ8N2N9 1353 aa9.58□□□□□ -0.88
CITED1-203ENST00000417400 GPR162Q16538 588 aa9.57□□□□□ -0.88
CITED1-203ENST00000417400 PELP1Q8IZL8 1130 aaKnown RBP9.57□□□□□ -0.88
CITED1-203ENST00000417400 TMC1Q8TDI8 760 aa9.57□□□□□ -0.88
CITED1-203ENST00000417400 MAP3K19Q56UN5 1328 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 C4AP0C0L4 1744 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 COL5A3P25940 1745 aaPredicted RBP9.56□□□□□ -0.88
CITED1-203ENST00000417400 PRIM1P49642 420 aaKnown RBP9.56□□□□□ -0.88
CITED1-203ENST00000417400 POLA2Q14181 598 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 USHBP1Q8N6Y0 703 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 SPRYD3Q8NCJ5 442 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 IP6K1Q92551 441 aa9.56□□□□□ -0.88
CITED1-203ENST00000417400 HOXC9P31274 260 aa9.55□□□□□ -0.88
CITED1-203ENST00000417400 MSL1Q68DK7 614 aa9.55□□□□□ -0.88
CITED1-203ENST00000417400 SMIM5Q71RC9 77 aa9.55□□□□□ -0.88
CITED1-203ENST00000417400 AMIGO3Q86WK7 504 aa9.55□□□□□ -0.88
CITED1-203ENST00000417400 COL23A1Q86Y22 540 aaPredicted RBP9.55□□□□□ -0.88
CITED1-203ENST00000417400 SYTL4Q96C24 671 aaPredicted RBP9.55□□□□□ -0.88
CITED1-203ENST00000417400 CEP350Q5VT06 3117 aa9.55□□□□□ -0.88
CITED1-203ENST00000417400 TFCP2L1Q9NZI6 479 aa9.54□□□□□ -0.88
CITED1-203ENST00000417400 ATP10DQ9P241 1426 aa9.54□□□□□ -0.88
CITED1-203ENST00000417400 MYH14Q7Z406 1995 aaKnown RBP9.54□□□□□ -0.88
CITED1-203ENST00000417400 CICQ96RK0 1608 aaPredicted RBP9.53□□□□□ -0.88
CITED1-203ENST00000417400 GIGYF1O75420 1035 aaPredicted RBP9.53□□□□□ -0.88
CITED1-203ENST00000417400 SLC27A3Q5K4L6 730 aa9.53□□□□□ -0.88
CITED1-203ENST00000417400 HDGFL2Q7Z4V5 671 aaPredicted RBP9.53□□□□□ -0.88
CITED1-203ENST00000417400 SLC16A10Q8TF71 515 aa9.53□□□□□ -0.88
CITED1-203ENST00000417400 TESK2Q96S53 571 aa9.53□□□□□ -0.88
CITED1-203ENST00000417400 CARD11Q9BXL7 1154 aa9.53□□□□□ -0.88
CITED1-203ENST00000417400 ADCY9O60503 1353 aa9.52□□□□□ -0.88
CITED1-203ENST00000417400 ARFGEF1Q9Y6D6 1849 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 SBF1O95248 1867 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 POLD1P28340 1107 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 RRS1Q15050 365 aaKnown RBP9.52□□□□□ -0.89
CITED1-203ENST00000417400 CCDC88AQ3V6T2 1871 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 NBPF6Q5VWK0 638 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 NBPF4Q96M43 638 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 CFAP44Q96MT7 982 aa9.52□□□□□ -0.89
CITED1-203ENST00000417400 CCNL1Q9UK58 526 aaPredicted RBP9.52□□□□□ -0.89
CITED1-203ENST00000417400 WWC3Q9ULE0 1092 aa9.51□□□□□ -0.89
CITED1-203ENST00000417400 ZCRB1Q8TBF4 217 aaKnown RBP9.5□□□□□ -0.89
CITED1-203ENST00000417400 WDR90Q96KV7 1748 aa9.5□□□□□ -0.89
CITED1-203ENST00000417400 RTL1A6NKG5 1358 aa9.5□□□□□ -0.89
CITED1-203ENST00000417400 USP47Q96K76 1375 aa9.5□□□□□ -0.89
CITED1-203ENST00000417400 NCAPD2Q15021 1401 aa9.49□□□□□ -0.89
CITED1-203ENST00000417400 ZNF831Q5JPB2 1677 aa9.49□□□□□ -0.89
CITED1-203ENST00000417400 TJP1Q07157 1748 aa9.49□□□□□ -0.89
CITED1-203ENST00000417400 GGNBP2Q9H3C7 697 aa9.49□□□□□ -0.89
CITED1-203ENST00000417400 TERF2IPQ9NYB0 399 aa9.49□□□□□ -0.89
CITED1-203ENST00000417400 PALLDQ8WX93 1383 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 53.5 ms