RNA–Protein interactions for RNA: ENST00000417285.6

VEGFA-208, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,081 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-208ENST00000417285 PRIM1P49642 420 aaKnown RBP34.96■■■■□ 3.19
VEGFA-208ENST00000417285 USHBP1Q8N6Y0 703 aa34.96■■■■□ 3.19
VEGFA-208ENST00000417285 KAT6BQ8WYB5 2073 aa34.96■■■■□ 3.19
VEGFA-208ENST00000417285 SYTL4Q96C24 671 aaPredicted RBP34.95■■■■□ 3.19
VEGFA-208ENST00000417285 SLC27A3Q5K4L6 730 aa34.94■■■■□ 3.18
VEGFA-208ENST00000417285 EMILIN1Q9Y6C2 1016 aa34.94■■■■□ 3.18
VEGFA-208ENST00000417285 MEGF6O75095 1541 aa34.93■■■■□ 3.18
VEGFA-208ENST00000417285 PPM1GO15355 546 aaPredicted RBP34.92■■■■□ 3.18
VEGFA-208ENST00000417285 PDGFDQ9GZP0 370 aaPredicted RBP34.92■■■■□ 3.18
VEGFA-208ENST00000417285 WASHC2AQ641Q2 1341 aa34.9■■■■□ 3.18
VEGFA-208ENST00000417285 ZBTB7AO95365 584 aa34.89■■■■□ 3.18
VEGFA-208ENST00000417285 LRRC4BQ9NT99 713 aa34.89■■■■□ 3.18
VEGFA-208ENST00000417285 BTAF1O14981 1849 aa34.88■■■■□ 3.17
VEGFA-208ENST00000417285 RGPD2P0DJD1 1756 aa34.87■■■■□ 3.17
VEGFA-208ENST00000417285 PANK3Q9H999 370 aa34.86■■■■□ 3.17
VEGFA-208ENST00000417285 POLKQ9UBT6 870 aa34.86■■■■□ 3.17
VEGFA-208ENST00000417285 PCDH11XQ9BZA7 1347 aa34.85■■■■□ 3.17
VEGFA-208ENST00000417285 PCDH11YQ9BZA8 1340 aa34.85■■■■□ 3.17
VEGFA-208ENST00000417285 MTFR1LQ9H019 292 aa34.85■■■■□ 3.17
VEGFA-208ENST00000417285 ATF5Q9Y2D1 282 aaPredicted RBP34.85■■■■□ 3.17
VEGFA-208ENST00000417285 CASZ1Q86V15 1759 aa34.84■■■■□ 3.17
VEGFA-208ENST00000417285 DCAF8L1A6NGE4 600 aa34.82■■■■□ 3.16
VEGFA-208ENST00000417285 PTGER2P43116 358 aa34.82■■■■□ 3.16
VEGFA-208ENST00000417285 HMGB2P26583 209 aaKnown RBP34.8■■■■□ 3.16
VEGFA-208ENST00000417285 ZNF827Q17R98 1081 aa34.8■■■■□ 3.16
VEGFA-208ENST00000417285 AKT1S1Q96B36 256 aa34.8■■■■□ 3.16
VEGFA-208ENST00000417285 NSD2O96028 1365 aa34.79■■■■□ 3.16
VEGFA-208ENST00000417285 EYA1Q99502 592 aa34.78■■■■□ 3.16
VEGFA-208ENST00000417285 SPG7Q9UQ90 795 aa34.78■■■■□ 3.16
VEGFA-208ENST00000417285 TNNT2P45379 298 aaPredicted RBP34.77■■■■□ 3.16
VEGFA-208ENST00000417285 CYP27B1O15528 508 aa34.76■■■■□ 3.16
VEGFA-208ENST00000417285 SLC16A10Q8TF71 515 aa34.76■■■■□ 3.16
VEGFA-208ENST00000417285 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP34.76■■■■□ 3.167e-31■□□□□ 9.1
VEGFA-208ENST00000417285 PAPPAQ13219 1627 aa34.75■■■■□ 3.15
VEGFA-208ENST00000417285 NCAPD2Q15021 1401 aa34.74■■■■□ 3.15
VEGFA-208ENST00000417285 CCNL1Q9UK58 526 aaPredicted RBP34.74■■■■□ 3.15
VEGFA-208ENST00000417285 SHANK3Q9BYB0 1731 aa34.74■■■■□ 3.15
VEGFA-208ENST00000417285 SGIP1Q9BQI5 828 aa34.73■■■■□ 3.15
VEGFA-208ENST00000417285 TFCP2L1Q9NZI6 479 aa34.73■■■■□ 3.15
VEGFA-208ENST00000417285 NKX1-1Q15270 411 aaPredicted RBP34.72■■■■□ 3.15
VEGFA-208ENST00000417285 KCNQ4P56696 695 aa34.71■■■■□ 3.15
VEGFA-208ENST00000417285 DOT1LQ8TEK3 1739 aa34.71■■■■□ 3.15
VEGFA-208ENST00000417285 MAP2P11137 1827 aaKnown RBP34.7■■■■□ 3.15
VEGFA-208ENST00000417285 EIF4A2Q14240 407 aaKnown RBP34.7■■■■□ 3.15
VEGFA-208ENST00000417285 KNSTRNQ9Y448 316 aa34.7■■■■□ 3.15
VEGFA-208ENST00000417285 MPRIPQ6WCQ1 1025 aa34.69■■■■□ 3.14
VEGFA-208ENST00000417285 ANKRD26Q9UPS8 1709 aa34.69■■■■□ 3.14
VEGFA-208ENST00000417285 MORC1Q86VD1 984 aa34.68■■■■□ 3.14
VEGFA-208ENST00000417285 ARXQ96QS3 562 aa34.67■■■■□ 3.14
VEGFA-208ENST00000417285 SMARCC1Q92922 1105 aaPredicted RBP34.66■■■■□ 3.14
VEGFA-208ENST00000417285 PNPLA7Q6ZV29 1317 aa34.65■■■■□ 3.14
VEGFA-208ENST00000417285 SYT17Q9BSW7 474 aa34.65■■■■□ 3.14
VEGFA-208ENST00000417285 FHDC1Q9C0D6 1143 aaPredicted RBP34.65■■■■□ 3.14
VEGFA-208ENST00000417285 PLEKHG2Q9H7P9 1386 aa34.63■■■■□ 3.13
VEGFA-208ENST00000417285 IFNL2Q8IZJ0 200 aa34.63■■■■□ 3.13
VEGFA-208ENST00000417285 LY75O60449 1722 aa34.61■■■■□ 3.13
VEGFA-208ENST00000417285 POLD1P28340 1107 aa34.61■■■■□ 3.13
VEGFA-208ENST00000417285 PIGBQ92521 554 aa34.6■■■■□ 3.13
VEGFA-208ENST00000417285 PALLDQ8WX93 1383 aa34.6■■■■□ 3.13
VEGFA-208ENST00000417285 IGSF1Q8N6C5 1336 aa34.58■■■■□ 3.13
VEGFA-208ENST00000417285 PHKG2P15735 406 aa34.58■■■■□ 3.13
VEGFA-208ENST00000417285 PKD1L3Q7Z443 1732 aa34.58■■■■□ 3.13
VEGFA-208ENST00000417285 KIF7Q2M1P5 1343 aa34.57■■■■□ 3.13
VEGFA-208ENST00000417285 FLAD1Q8NFF5 587 aa34.56■■■■□ 3.12
VEGFA-208ENST00000417285 TMOD3Q9NYL9 352 aa34.55■■■■□ 3.12
VEGFA-208ENST00000417285 MAP3K5Q99683 1374 aa34.54■■■■□ 3.12
VEGFA-208ENST00000417285 YY1P25490 414 aa34.54■■■■□ 3.12
VEGFA-208ENST00000417285 PLEKHO1Q53GL0 409 aaPredicted RBP34.54■■■■□ 3.12
VEGFA-208ENST00000417285 QSER1Q2KHR3 1735 aa34.54■■■■□ 3.12
VEGFA-208ENST00000417285 MSH5O43196 834 aa34.53■■■■□ 3.12
VEGFA-208ENST00000417285 AMER1Q5JTC6 1135 aaPredicted RBP34.53■■■■□ 3.12
VEGFA-208ENST00000417285 COL23A1Q86Y22 540 aaPredicted RBP34.53■■■■□ 3.12
VEGFA-208ENST00000417285 HSP90AB1P08238 724 aaKnown RBP34.51■■■■□ 3.12
VEGFA-208ENST00000417285 AMOTQ4VCS5 1084 aa34.51■■■■□ 3.12
VEGFA-208ENST00000417285 ERVV-2B6SEH9 535 aa34.47■■■■□ 3.11
VEGFA-208ENST00000417285 DCAF5Q96JK2 942 aa34.47■■■■□ 3.11
VEGFA-208ENST00000417285 LOC102724428A0A0B4J2F2 783 aa34.46■■■■□ 3.11
VEGFA-208ENST00000417285 SIK1P57059 783 aa34.46■■■■□ 3.11
VEGFA-208ENST00000417285 PER1O15534 1290 aaPredicted RBP34.45■■■■□ 3.11
VEGFA-208ENST00000417285 AK7Q96M32 723 aa34.45■■■■□ 3.11
VEGFA-208ENST00000417285 ASAP1Q9ULH1 1129 aa34.45■■■■□ 3.11
VEGFA-208ENST00000417285 TOGARAM1Q9Y4F4 1720 aa34.44■■■■□ 3.1
VEGFA-208ENST00000417285 ITGB4P16144 1822 aa34.44■■■■□ 3.1
VEGFA-208ENST00000417285 IL13P35225 146 aa34.43■■■■□ 3.1
VEGFA-208ENST00000417285 ZNF530Q6P9A1 599 aaPredicted RBP34.42■■■■□ 3.1
VEGFA-208ENST00000417285 ATG3Q9NT62 314 aa34.42■■■■□ 3.1
VEGFA-208ENST00000417285 SULT6B1Q6IMI4 303 aa34.41■■■■□ 3.1
VEGFA-208ENST00000417285 AEBP1Q8IUX7 1158 aa34.4■■■■□ 3.1
VEGFA-208ENST00000417285 KLHL34Q8N239 644 aa34.4■■■■□ 3.1
VEGFA-208ENST00000417285 MTHFSP49914 203 aa34.39■■■■□ 3.1
VEGFA-208ENST00000417285 ATP6V1AP38606 617 aa34.38■■■■□ 3.09
VEGFA-208ENST00000417285 C1orf141Q5JVX7 400 aa34.38■■■■□ 3.09
VEGFA-208ENST00000417285 TUBGCP6Q96RT7 1819 aa34.38■■■■□ 3.09
VEGFA-208ENST00000417285 C5P01031 1676 aa34.38■■■■□ 3.09
VEGFA-208ENST00000417285 COL24A1Q17RW2 1714 aa34.37■■■■□ 3.09
VEGFA-208ENST00000417285 KDRP35968 1356 aa34.36■■■■□ 3.09
VEGFA-208ENST00000417285 SSFA2P28290 1259 aa34.35■■■■□ 3.09
VEGFA-208ENST00000417285 CABP4P57796 275 aa34.35■■■■□ 3.09
VEGFA-208ENST00000417285 LINC00116Q8NCU8 138 aa34.35■■■■□ 3.09
VEGFA-208ENST00000417285 GPR162Q16538 588 aa34.34■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms