RNA–Protein interactions for RNA: ENST00000417172.5

CALD1-204, Transcript of caldesmon 1, humanhuman

TSL 5 BASIC

Gene CALD1, Length 1,915 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-204ENST00000417172 LRRC37A3O60309 1634 aa22.02■■□□□ 1.12
CALD1-204ENST00000417172 TOM1O60784 492 aa22.02■■□□□ 1.12
CALD1-204ENST00000417172 C20orf194Q5TEA3 1177 aa22.02■■□□□ 1.12
CALD1-204ENST00000417172 IFT57Q9NWB7 429 aa22.02■■□□□ 1.12
CALD1-204ENST00000417172 UBAP1LF5GYI3 381 aa22.02■■□□□ 1.11
CALD1-204ENST00000417172 CALD1Q05682 793 aaKnown RBP22.02■■□□□ 1.11
CALD1-204ENST00000417172 CRB1P82279 1406 aa22.01■■□□□ 1.11
CALD1-204ENST00000417172 RARSP54136 660 aaKnown RBP22.01■■□□□ 1.11
CALD1-204ENST00000417172 MAP3K5Q99683 1374 aa22.01■■□□□ 1.11
CALD1-204ENST00000417172 GNAI1P63096 354 aa22■■□□□ 1.11
CALD1-204ENST00000417172 RTF1Q92541 710 aaKnown RBP22■■□□□ 1.11
CALD1-204ENST00000417172 CFAP44Q96MT7 982 aa22■■□□□ 1.11
CALD1-204ENST00000417172 COL5A2P05997 1499 aaPredicted RBP22■■□□□ 1.11
CALD1-204ENST00000417172 GNAT3A8MTJ3 354 aa21.99■■□□□ 1.11
CALD1-204ENST00000417172 MEGF6O75095 1541 aa21.98■■□□□ 1.11
CALD1-204ENST00000417172 MIS18AQ9NYP9 233 aa21.98■■□□□ 1.11
CALD1-204ENST00000417172 TSPYL6Q8N831 410 aa21.97■■□□□ 1.11
CALD1-204ENST00000417172 IL17REQ8NFR9 667 aa21.97■■□□□ 1.11
CALD1-204ENST00000417172 EXOC6Q8TAG9 804 aa21.97■■□□□ 1.11
CALD1-204ENST00000417172 ZNF530Q6P9A1 599 aaPredicted RBP21.96■■□□□ 1.11
CALD1-204ENST00000417172 ELL2O00472 640 aaPredicted RBP21.96■■□□□ 1.11
CALD1-204ENST00000417172 KRT24Q2M2I5 525 aa21.95■■□□□ 1.1
CALD1-204ENST00000417172 STRN4Q9NRL3 753 aa21.95■■□□□ 1.1
CALD1-204ENST00000417172 WDR17Q8IZU2 1322 aa21.94■■□□□ 1.1
CALD1-204ENST00000417172 CHL1O00533 1208 aa21.94■■□□□ 1.1
CALD1-204ENST00000417172 PLEKHO1Q53GL0 409 aaPredicted RBP21.94■■□□□ 1.1
CALD1-204ENST00000417172 C8orf58Q8NAV2 365 aa21.94■■□□□ 1.1
CALD1-204ENST00000417172 CRBNQ96SW2 442 aa21.94■■□□□ 1.1
CALD1-204ENST00000417172 ERICH6BQ5W0A0 696 aa21.93■■□□□ 1.1
CALD1-204ENST00000417172 RAPGEF4Q8WZA2 1011 aa21.93■■□□□ 1.1
CALD1-204ENST00000417172 FRAT1Q92837 279 aaPredicted RBP21.93■■□□□ 1.1
CALD1-204ENST00000417172 LGR6Q9HBX8 967 aa21.93■■□□□ 1.1
CALD1-204ENST00000417172 HTATSF1O43719 755 aaKnown RBP21.92■■□□□ 1.1
CALD1-204ENST00000417172 TOM1L2Q6ZVM7 507 aa21.92■■□□□ 1.1
CALD1-204ENST00000417172 SSH1Q8WYL5 1049 aa21.92■■□□□ 1.1
CALD1-204ENST00000417172 TNNQ9UQP3 1299 aa21.92■■□□□ 1.1
CALD1-204ENST00000417172 COL14A1Q05707 1796 aaKnown RBP21.92■■□□□ 1.1
CALD1-204ENST00000417172 LARP1Q6PKG0 1096 aaKnown RBP21.92■■□□□ 1.1
CALD1-204ENST00000417172 PPP4R2Q9NY27 417 aa21.92■■□□□ 1.1
CALD1-204ENST00000417172 CT47B1P0C2W7 299 aaPredicted RBP21.91■■□□□ 1.1
CALD1-204ENST00000417172 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
CALD1-204ENST00000417172 B4GALNT3Q6L9W6 998 aa21.91■■□□□ 1.1
CALD1-204ENST00000417172 MPRIPQ6WCQ1 1025 aa21.91■■□□□ 1.1
CALD1-204ENST00000417172 PKD1L3Q7Z443 1732 aa21.91■■□□□ 1.1
CALD1-204ENST00000417172 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
CALD1-204ENST00000417172 CERKQ8TCT0 537 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 SMC4Q9NTJ3 1288 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 BTG4Q9NY30 223 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 VAMP4O75379 141 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 TATP17735 454 aaPredicted RBP21.9■■□□□ 1.1
CALD1-204ENST00000417172 AKAP4Q5JQC9 854 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 TSPYL4Q9UJ04 414 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 PLCH1Q4KWH8 1693 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 CEMIPQ8WUJ3 1361 aa21.9■■□□□ 1.1
CALD1-204ENST00000417172 TCERG1O14776 1098 aaKnown RBP21.89■■□□□ 1.09
CALD1-204ENST00000417172 ADAMTS2O95450 1211 aa21.89■■□□□ 1.09
CALD1-204ENST00000417172 CANXP27824 592 aaKnown RBP21.89■■□□□ 1.09
CALD1-204ENST00000417172 PARP4Q9UKK3 1724 aaKnown RBP21.89■■□□□ 1.09
CALD1-204ENST00000417172 EVA1CP58658 441 aa21.88■■□□□ 1.09
CALD1-204ENST00000417172 TWISTNBQ3B726 338 aaPredicted RBP21.88■■□□□ 1.09
CALD1-204ENST00000417172 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
CALD1-204ENST00000417172 NUTM2BA6NNL0 878 aaPredicted RBP21.87■■□□□ 1.09
CALD1-204ENST00000417172 NUTM2EB1AL46 878 aaPredicted RBP21.87■■□□□ 1.09
CALD1-204ENST00000417172 NUTM2AQ8IVF1 878 aaPredicted RBP21.87■■□□□ 1.09
CALD1-204ENST00000417172 PANK1Q8TE04 598 aa21.86■■□□□ 1.09
CALD1-204ENST00000417172 USP35Q9P2H5 1018 aa21.86■■□□□ 1.09
CALD1-204ENST00000417172 SCN11AQ9UI33 1791 aa21.86■■□□□ 1.09
CALD1-204ENST00000417172 ADAMTS7Q9UKP4 1686 aa21.86■■□□□ 1.09
CALD1-204ENST00000417172 SIPA1L3O60292 1781 aaPredicted RBP21.85■■□□□ 1.09
CALD1-204ENST00000417172 OVOS2A0A0G2JMS6 1433 aa21.85■■□□□ 1.09
CALD1-204ENST00000417172 KDM3BQ7LBC6 1761 aa21.85■■□□□ 1.09
CALD1-204ENST00000417172 RNMTO43148 476 aaKnown RBP21.84■■□□□ 1.09
CALD1-204ENST00000417172 CARD10Q9BWT7 1032 aa21.84■■□□□ 1.09
CALD1-204ENST00000417172 SHANK3Q9BYB0 1731 aa21.84■■□□□ 1.09
CALD1-204ENST00000417172 RLBP1P12271 317 aa21.84■■□□□ 1.09
CALD1-204ENST00000417172 TAF7Q15545 349 aaPredicted RBP21.84■■□□□ 1.09
CALD1-204ENST00000417172 CLUAP1Q96AJ1 413 aa21.84■■□□□ 1.09
CALD1-204ENST00000417172 KDM6AO15550 1401 aaPredicted RBP21.83■■□□□ 1.09
CALD1-204ENST00000417172 SPG7Q9UQ90 795 aa21.83■■□□□ 1.09
CALD1-204ENST00000417172 CYP27B1O15528 508 aa21.82■■□□□ 1.08
CALD1-204ENST00000417172 PHKG2P15735 406 aa21.82■■□□□ 1.08
CALD1-204ENST00000417172 NOB1Q9ULX3 412 aaKnown RBP21.82■■□□□ 1.08
CALD1-204ENST00000417172 NRAPQ86VF7 1730 aa21.82■■□□□ 1.08
CALD1-204ENST00000417172 ALDH1L2Q3SY69 923 aa21.81■■□□□ 1.08
CALD1-204ENST00000417172 COG6Q9Y2V7 657 aa21.81■■□□□ 1.08
CALD1-204ENST00000417172 TEFQ10587 303 aa21.8■■□□□ 1.08
CALD1-204ENST00000417172 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.8■■□□□ 1.082e-7■■■□□ 15.9
CALD1-204ENST00000417172 KCNQ3O43525 872 aa21.8■■□□□ 1.08
CALD1-204ENST00000417172 PDE3AQ14432 1141 aa21.8■■□□□ 1.08
CALD1-204ENST00000417172 MRPL50Q8N5N7 158 aaKnown RBP21.8■■□□□ 1.08
CALD1-204ENST00000417172 TRIM27P14373 513 aa21.79■■□□□ 1.08
CALD1-204ENST00000417172 ZKSCAN2Q63HK3 967 aa21.79■■□□□ 1.08
CALD1-204ENST00000417172 CCDC136Q96JN2 1154 aa21.79■■□□□ 1.08
CALD1-204ENST00000417172 IL2RBP14784 551 aa21.78■■□□□ 1.08
CALD1-204ENST00000417172 IFNL2Q8IZJ0 200 aa21.78■■□□□ 1.08
CALD1-204ENST00000417172 ZNF428Q96B54 188 aa21.78■■□□□ 1.08
CALD1-204ENST00000417172 WNK3Q9BYP7 1800 aa21.77■■□□□ 1.08
CALD1-204ENST00000417172 KIF16BQ96L93 1317 aa21.77■■□□□ 1.07
CALD1-204ENST00000417172 BTBD11A6QL63 1104 aa21.76■■□□□ 1.07
CALD1-204ENST00000417172 ZCRB1Q8TBF4 217 aaKnown RBP21.76■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms