RNA–Protein interactions for RNA: ENST00000416942.2

GTF3AP1-201, Transcript of general transcription factor IIIA pseudogene 1, humanhuman

BASIC

Gene GTF3AP1, Length 1,004 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3AP1-201ENST00000416942 CBLBQ13191 982 aa11.24□□□□□ -0.61
GTF3AP1-201ENST00000416942 CYLDQ9NQC7 956 aa11.24□□□□□ -0.61
GTF3AP1-201ENST00000416942 ZNF777Q9ULD5 760 aaPredicted RBP11.24□□□□□ -0.61
GTF3AP1-201ENST00000416942 BMP1P13497 986 aa11.23□□□□□ -0.61
GTF3AP1-201ENST00000416942 TSGA10IPQ3SY00 556 aa11.23□□□□□ -0.61
GTF3AP1-201ENST00000416942 MEIOBQ8N635 442 aa11.23□□□□□ -0.61
GTF3AP1-201ENST00000416942 TRIM52Q96A61 297 aa11.23□□□□□ -0.61
GTF3AP1-201ENST00000416942 CHIC2Q9UKJ5 165 aa11.23□□□□□ -0.61
GTF3AP1-201ENST00000416942 Q6ZVU0 165 aa11.22□□□□□ -0.61
GTF3AP1-201ENST00000416942 MROH2BQ7Z745 1585 aa11.22□□□□□ -0.61
GTF3AP1-201ENST00000416942 CALR3Q96L12 384 aaKnown RBP11.22□□□□□ -0.61
GTF3AP1-201ENST00000416942 ATP13A2Q9NQ11 1180 aa11.22□□□□□ -0.61
GTF3AP1-201ENST00000416942 DOLKQ9UPQ8 538 aa11.22□□□□□ -0.61
GTF3AP1-201ENST00000416942 URB2Q14146 1524 aaKnown RBP11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 ADD1P35611 737 aaKnown RBP11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 ERVK-9P63128 1117 aa11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 MRPL14Q6P1L8 145 aaKnown RBP11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 ERICH6Q7L0X2 663 aa11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 TRIM46Q7Z4K8 759 aa11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 PLPP7Q8NBV4 271 aa11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 UCN2Q96RP3 112 aa11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 CDCA7Q9BWT1 371 aaPredicted RBP11.21□□□□□ -0.61
GTF3AP1-201ENST00000416942 ZNF608Q9ULD9 1512 aaPredicted RBP11.2□□□□□ -0.62
GTF3AP1-201ENST00000416942 SCTRP47872 440 aa11.2□□□□□ -0.62
GTF3AP1-201ENST00000416942 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
GTF3AP1-201ENST00000416942 SKIP12755 728 aa11.19□□□□□ -0.62
GTF3AP1-201ENST00000416942 MAP7D1Q3KQU3 841 aa11.19□□□□□ -0.62
GTF3AP1-201ENST00000416942 NFATC2IPQ8NCF5 419 aa11.19□□□□□ -0.62
GTF3AP1-201ENST00000416942 LINC00528Q8N1L1 170 aa11.18□□□□□ -0.62
GTF3AP1-201ENST00000416942 ADH1AP07327 375 aa11.17□□□□□ -0.62
GTF3AP1-201ENST00000416942 OXLD1Q5BKU9 147 aa11.17□□□□□ -0.62
GTF3AP1-201ENST00000416942 AGBL1Q96MI9 1066 aa11.17□□□□□ -0.62
GTF3AP1-201ENST00000416942 TSEN34Q9BSV6 310 aaKnown RBP11.17□□□□□ -0.62
GTF3AP1-201ENST00000416942 TIMELESSQ9UNS1 1208 aa11.17□□□□□ -0.62
GTF3AP1-201ENST00000416942 UPP2O95045 317 aa11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 MYCP01106 439 aaPredicted RBP11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 SCARF1Q14162 830 aa11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 PURBQ96QR8 312 aaKnown RBP11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 ESF1Q9H501 851 aaKnown RBP11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 GMPR2Q9P2T1 348 aaKnown RBP11.16□□□□□ -0.62
GTF3AP1-201ENST00000416942 RELBQ01201 579 aa11.15□□□□□ -0.62
GTF3AP1-201ENST00000416942 USP4Q13107 963 aa11.15□□□□□ -0.62
GTF3AP1-201ENST00000416942 C6orf118Q5T5N4 469 aa11.15□□□□□ -0.62
GTF3AP1-201ENST00000416942 ZFP42Q96MM3 310 aa11.15□□□□□ -0.62
GTF3AP1-201ENST00000416942 OSBPL3Q9H4L5 887 aa11.15□□□□□ -0.62
GTF3AP1-201ENST00000416942 ATP9BO43861 1147 aa11.14□□□□□ -0.63
GTF3AP1-201ENST00000416942 BMP2P12643 396 aa11.14□□□□□ -0.63
GTF3AP1-201ENST00000416942 KDF1Q8NAX2 398 aaPredicted RBP11.14□□□□□ -0.63
GTF3AP1-201ENST00000416942 USP17L5A8MUK1 530 aa11.13□□□□□ -0.63
GTF3AP1-201ENST00000416942 CYP2U1Q7Z449 544 aa11.13□□□□□ -0.63
GTF3AP1-201ENST00000416942 SIRT1Q96EB6 747 aa11.13□□□□□ -0.63
GTF3AP1-201ENST00000416942 SENP2Q9HC62 589 aa11.13□□□□□ -0.63
GTF3AP1-201ENST00000416942 ARID3CA6NKF2 412 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 POTECB2RU33 542 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 ATP5J2-PTCD1G3V325 749 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 LZTS3O60299 673 aaPredicted RBP11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 NCOA4Q13772 614 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 EML3Q32P44 896 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 DEPDC4Q8N2C3 294 aa11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 TFIP11Q9UBB9 837 aaKnown RBP11.12□□□□□ -0.63
GTF3AP1-201ENST00000416942 PALM3A6NDB9 673 aaPredicted RBP11.11□□□□□ -0.63
GTF3AP1-201ENST00000416942 PTGIRP43119 386 aa11.11□□□□□ -0.63
GTF3AP1-201ENST00000416942 TRIM47Q96LD4 638 aa11.11□□□□□ -0.63
GTF3AP1-201ENST00000416942 PPP1R12CQ9BZL4 782 aa11.11□□□□□ -0.63
GTF3AP1-201ENST00000416942 ZNF395Q9H8N7 513 aaPredicted RBP11.11□□□□□ -0.63
GTF3AP1-201ENST00000416942 USP17L3A6NCW0 530 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 USP17L4A6NCW7 530 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 SPINT1O43278 529 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 USP17L2Q6R6M4 530 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 USP17L1Q7RTZ2 530 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 PLEKHM2Q8IWE5 1019 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 KIFC2Q96AC6 838 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 CFTRP13569 1480 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 IFT140Q96RY7 1462 aa11.1□□□□□ -0.63
GTF3AP1-201ENST00000416942 RSF1Q96T23 1441 aaPredicted RBP11.09□□□□□ -0.63
GTF3AP1-201ENST00000416942 C11orf95C9JLR9 678 aaPredicted RBP11.08□□□□□ -0.64
GTF3AP1-201ENST00000416942 ZNF787Q6DD87 383 aa11.08□□□□□ -0.64
GTF3AP1-201ENST00000416942 NOD1Q9Y239 953 aa11.08□□□□□ -0.64
GTF3AP1-201ENST00000416942 MAFBQ9Y5Q3 323 aaPredicted RBP11.08□□□□□ -0.64
GTF3AP1-201ENST00000416942 INSM2Q96T92 566 aaPredicted RBP11.07□□□□□ -0.64
GTF3AP1-201ENST00000416942 A0A1W2PRU2 124 aa11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 GNRH1P01148 92 aa11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 SNRPBP14678 240 aaKnown RBP11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 ARHGEF10LQ9HCE6 1279 aa11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 SOS2Q07890 1332 aaPredicted RBP11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 AQRO60306 1485 aaKnown RBP eCLIP11.06□□□□□ -0.64
GTF3AP1-201ENST00000416942 CTSOP43234 321 aaPredicted RBP11.05□□□□□ -0.64
GTF3AP1-201ENST00000416942 POLMQ9NP87 494 aaPredicted RBP11.05□□□□□ -0.64
GTF3AP1-201ENST00000416942 TTLL8A6PVC2 850 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 MEN1O00255 615 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 LMOD1P29536 600 aaPredicted RBP11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 GTF2IP78347 998 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 CFAP70Q5T0N1 1121 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 RAB6BQ9NRW1 208 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 MKRN1Q9UHC7 482 aaKnown RBP11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 PCDHGA11Q9Y5H2 935 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 WIZO95785 1651 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 CHD1O14646 1710 aa11.04□□□□□ -0.64
GTF3AP1-201ENST00000416942 CLN3Q13286 438 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms