RNA–Protein interactions for RNA: ENST00000416380.6

YIPF3-203, Transcript of Yip1 domain family member 3, humanhuman

TSL 5

Gene YIPF3, Length 1,005 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-203ENST00000416380 CCDC184Q52MB2 194 aa17.15■□□□□ 0.34
YIPF3-203ENST00000416380 SULT6B1Q6IMI4 303 aa17.15■□□□□ 0.34
YIPF3-203ENST00000416380 PTF1AQ7RTS3 328 aa17.14■□□□□ 0.33
YIPF3-203ENST00000416380 ZCRB1Q8TBF4 217 aaKnown RBP17.14■□□□□ 0.33
YIPF3-203ENST00000416380 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.14■□□□□ 0.33
YIPF3-203ENST00000416380 TATP17735 454 aaPredicted RBP17.12■□□□□ 0.33
YIPF3-203ENST00000416380 PDE3BQ13370 1112 aa17.12■□□□□ 0.33
YIPF3-203ENST00000416380 RAPGEF4Q8WZA2 1011 aa17.12■□□□□ 0.33
YIPF3-203ENST00000416380 RSPH6AQ9H0K4 717 aa17.12■□□□□ 0.33
YIPF3-203ENST00000416380 A0A0G2JS52 829 aa17.11■□□□□ 0.33
YIPF3-203ENST00000416380 HMOX1P09601 288 aa17.11■□□□□ 0.33
YIPF3-203ENST00000416380 MYT1Q01538 1121 aa17.11■□□□□ 0.33
YIPF3-203ENST00000416380 NKX1-1Q15270 411 aaPredicted RBP17.11■□□□□ 0.33
YIPF3-203ENST00000416380 FAM196AQ6ZSG2 479 aa17.1■□□□□ 0.33
YIPF3-203ENST00000416380 PHACTR3Q96KR7 559 aa17.09■□□□□ 0.33
YIPF3-203ENST00000416380 CFAP53Q96M91 514 aa17.09■□□□□ 0.33
YIPF3-203ENST00000416380 PLEKHF1Q96S99 279 aa17.09■□□□□ 0.33
YIPF3-203ENST00000416380 TNS1Q9HBL0 1735 aaKnown RBP17.09■□□□□ 0.33
YIPF3-203ENST00000416380 PHKG2P15735 406 aa17.08■□□□□ 0.32
YIPF3-203ENST00000416380 SBF2Q86WG5 1849 aa17.07■□□□□ 0.32
YIPF3-203ENST00000416380 TOGARAM1Q9Y4F4 1720 aa17.07■□□□□ 0.32
YIPF3-203ENST00000416380 KCNQ2O43526 872 aa17.07■□□□□ 0.32
YIPF3-203ENST00000416380 DDX54Q8TDD1 881 aaKnown RBP17.07■□□□□ 0.32
YIPF3-203ENST00000416380 KDM6AO15550 1401 aaPredicted RBP17.06■□□□□ 0.32
YIPF3-203ENST00000416380 PCDH11XQ9BZA7 1347 aa17.06■□□□□ 0.32
YIPF3-203ENST00000416380 PCDH11YQ9BZA8 1340 aa17.06■□□□□ 0.32
YIPF3-203ENST00000416380 U2SURPO15042 1029 aaKnown RBP17.06■□□□□ 0.32
YIPF3-203ENST00000416380 MTHFSDQ2M296 383 aaKnown RBP17.06■□□□□ 0.32
YIPF3-203ENST00000416380 ADAMTS7Q9UKP4 1686 aa17.06■□□□□ 0.32
YIPF3-203ENST00000416380 NHSQ6T4R5 1651 aa17.05■□□□□ 0.32
YIPF3-203ENST00000416380 FCHSD2O94868 740 aa17.05■□□□□ 0.32
YIPF3-203ENST00000416380 TRIM37O94972 964 aa17.04■□□□□ 0.32
YIPF3-203ENST00000416380 AMOTQ4VCS5 1084 aa17.04■□□□□ 0.32
YIPF3-203ENST00000416380 SPG7Q9UQ90 795 aa17.04■□□□□ 0.32
YIPF3-203ENST00000416380 U2AF1L5P0DN76 240 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-203ENST00000416380 PRKAR2BP31323 418 aa17.03■□□□□ 0.32
YIPF3-203ENST00000416380 U2AF1Q01081 240 aaKnown RBP eCLIP17.03■□□□□ 0.32
YIPF3-203ENST00000416380 PLEKHO1Q53GL0 409 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-203ENST00000416380 CCDC125Q86Z20 511 aa17.03■□□□□ 0.32
YIPF3-203ENST00000416380 BCL11BQ9C0K0 894 aaPredicted RBP17.03■□□□□ 0.32
YIPF3-203ENST00000416380 NUDCQ9Y266 331 aa17.03■□□□□ 0.32
YIPF3-203ENST00000416380 IFNL2Q8IZJ0 200 aa17.02■□□□□ 0.32
YIPF3-203ENST00000416380 PNISRQ8TF01 805 aaKnown RBP17.02■□□□□ 0.32
YIPF3-203ENST00000416380 ANP32CO43423 234 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 PROM2Q8N271 834 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 ACSBG1Q96GR2 724 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 CAMKK2Q96RR4 588 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 ADAMTS8Q9UP79 889 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 DOT1LQ8TEK3 1739 aa17.01■□□□□ 0.31
YIPF3-203ENST00000416380 ZNF530Q6P9A1 599 aaPredicted RBP17■□□□□ 0.31
YIPF3-203ENST00000416380 DEFB132Q7Z7B7 95 aa17■□□□□ 0.31
YIPF3-203ENST00000416380 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
YIPF3-203ENST00000416380 MRC1P22897 1456 aa16.99■□□□□ 0.31
YIPF3-203ENST00000416380 AKAP4Q5JQC9 854 aa16.98■□□□□ 0.31
YIPF3-203ENST00000416380 LGR6Q9HBX8 967 aa16.98■□□□□ 0.31
YIPF3-203ENST00000416380 PLSCR1O15162 318 aa16.97■□□□□ 0.31
YIPF3-203ENST00000416380 IL17REQ8NFR9 667 aa16.97■□□□□ 0.31
YIPF3-203ENST00000416380 DCAF5Q96JK2 942 aa16.97■□□□□ 0.31
YIPF3-203ENST00000416380 CEMIPQ8WUJ3 1361 aa16.97■□□□□ 0.31
YIPF3-203ENST00000416380 MPRIPQ6WCQ1 1025 aa16.96■□□□□ 0.31
YIPF3-203ENST00000416380 PIGBQ92521 554 aa16.96■□□□□ 0.31
YIPF3-203ENST00000416380 BTAF1O14981 1849 aa16.96■□□□□ 0.3
YIPF3-203ENST00000416380 RGPD3A6NKT7 1758 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-203ENST00000416380 RGPD4Q7Z3J3 1758 aa16.95■□□□□ 0.3
YIPF3-203ENST00000416380 ERVV-2B6SEH9 535 aa16.95■□□□□ 0.3
YIPF3-203ENST00000416380 EN1Q05925 392 aaPredicted RBP16.95■□□□□ 0.3
YIPF3-203ENST00000416380 MAP3K5Q99683 1374 aa16.94■□□□□ 0.3
YIPF3-203ENST00000416380 RNMTO43148 476 aaKnown RBP16.94■□□□□ 0.3
YIPF3-203ENST00000416380 APBA3O96018 575 aa16.94■□□□□ 0.3
YIPF3-203ENST00000416380 DIEXFQ68CQ4 756 aaKnown RBP16.94■□□□□ 0.3
YIPF3-203ENST00000416380 GAS2L2Q8NHY3 880 aa16.94■□□□□ 0.3
YIPF3-203ENST00000416380 RREB1Q92766 1687 aa16.94■□□□□ 0.3
YIPF3-203ENST00000416380 ITGB4P16144 1822 aa16.93■□□□□ 0.3
YIPF3-203ENST00000416380 SCN11AQ9UI33 1791 aa16.93■□□□□ 0.3
YIPF3-203ENST00000416380 EZH2Q15910 746 aaKnown RBP16.93■□□□□ 0.3
YIPF3-203ENST00000416380 HSP90AB1P08238 724 aaKnown RBP16.92■□□□□ 0.3
YIPF3-203ENST00000416380 NFE2L2Q16236 605 aa16.92■□□□□ 0.3
YIPF3-203ENST00000416380 MRS2Q9HD23 443 aa16.92■□□□□ 0.3
YIPF3-203ENST00000416380 GNAT3A8MTJ3 354 aa16.91■□□□□ 0.3
YIPF3-203ENST00000416380 CCDC146Q8IYE0 955 aa16.91■□□□□ 0.3
YIPF3-203ENST00000416380 ATG3Q9NT62 314 aa16.91■□□□□ 0.3
YIPF3-203ENST00000416380 LRRC4BQ9NT99 713 aa16.91■□□□□ 0.3
YIPF3-203ENST00000416380 PAPPAQ13219 1627 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 C1orf141Q5JVX7 400 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 MIER1Q8N108 512 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 RUNDC1Q96C34 613 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 SLC4A9Q96Q91 983 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 SLC52A2Q9HAB3 445 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 LY75O60449 1722 aa16.9■□□□□ 0.3
YIPF3-203ENST00000416380 SIPA1L3O60292 1781 aaPredicted RBP16.89■□□□□ 0.3
YIPF3-203ENST00000416380 CCER2I3L3R5 266 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 HTATSF1O43719 755 aaKnown RBP16.89■□□□□ 0.29
YIPF3-203ENST00000416380 TMPOP42166 694 aaKnown RBP16.89■□□□□ 0.29
YIPF3-203ENST00000416380 BAG6P46379 1132 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 NFATC2IPQ8NCF5 419 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 ASAP1Q9ULH1 1129 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 TRIM35Q9UPQ4 493 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 SRCAPQ6ZRS2 3230 aa16.89■□□□□ 0.29
YIPF3-203ENST00000416380 NUP188Q5SRE5 1749 aa16.88■□□□□ 0.29
YIPF3-203ENST00000416380 DCTN1Q14203 1278 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms