RNA–Protein interactions for RNA: ENST00000415597.5

LMCD1-203, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 5

Gene LMCD1, Length 870 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-203ENST00000415597 TFCP2L1Q9NZI6 479 aa14.87□□□□□ -0.03
LMCD1-203ENST00000415597 FAM208AQ9UK61 1670 aaKnown RBP14.87□□□□□ -0.03
LMCD1-203ENST00000415597 POLD1P28340 1107 aa14.86□□□□□ -0.03
LMCD1-203ENST00000415597 ARXQ96QS3 562 aa14.86□□□□□ -0.03
LMCD1-203ENST00000415597 PDGFDQ9GZP0 370 aaPredicted RBP14.86□□□□□ -0.03
LMCD1-203ENST00000415597 NHSQ6T4R5 1651 aa14.86□□□□□ -0.03
LMCD1-203ENST00000415597 INSRP06213 1382 aa14.85□□□□□ -0.03
LMCD1-203ENST00000415597 FLT4P35916 1363 aa14.85□□□□□ -0.03
LMCD1-203ENST00000415597 HSP90AB2PQ58FF8 381 aa14.85□□□□□ -0.03
LMCD1-203ENST00000415597 PTGER2P43116 358 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 USHBP1Q8N6Y0 703 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 SYT17Q9BSW7 474 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 LRRC4BQ9NT99 713 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 CCNL1Q9UK58 526 aaPredicted RBP14.84□□□□□ -0.03
LMCD1-203ENST00000415597 PCDH11XQ9BZA7 1347 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 PCDH11YQ9BZA8 1340 aa14.84□□□□□ -0.03
LMCD1-203ENST00000415597 MSH5O43196 834 aa14.83□□□□□ -0.04
LMCD1-203ENST00000415597 EIF4G2P78344 907 aaKnown RBP eCLIP14.83□□□□□ -0.04
LMCD1-203ENST00000415597 FHDC1Q9C0D6 1143 aaPredicted RBP14.83□□□□□ -0.04
LMCD1-203ENST00000415597 CCER1Q8TC90 406 aaPredicted RBP14.82□□□□□ -0.04
LMCD1-203ENST00000415597 AKT1S1Q96B36 256 aa14.82□□□□□ -0.04
LMCD1-203ENST00000415597 CARD14Q9BXL6 1004 aa14.82□□□□□ -0.04
LMCD1-203ENST00000415597 SPG7Q9UQ90 795 aa14.82□□□□□ -0.04
LMCD1-203ENST00000415597 NSD3Q9BZ95 1437 aa14.82□□□□□ -0.04
LMCD1-203ENST00000415597 ZNF827Q17R98 1081 aa14.81□□□□□ -0.04
LMCD1-203ENST00000415597 KLHL34Q8N239 644 aa14.81□□□□□ -0.04
LMCD1-203ENST00000415597 SMARCC1Q92922 1105 aaPredicted RBP14.81□□□□□ -0.04
LMCD1-203ENST00000415597 EMILIN1Q9Y6C2 1016 aa14.8□□□□□ -0.04
LMCD1-203ENST00000415597 BTAF1O14981 1849 aa14.8□□□□□ -0.04
LMCD1-203ENST00000415597 MEGF6O75095 1541 aa14.79□□□□□ -0.04
LMCD1-203ENST00000415597 MPRIPQ6WCQ1 1025 aa14.79□□□□□ -0.04
LMCD1-203ENST00000415597 CASZ1Q86V15 1759 aa14.79□□□□□ -0.04
LMCD1-203ENST00000415597 FLAD1Q8NFF5 587 aa14.79□□□□□ -0.04
LMCD1-203ENST00000415597 WASHC2AQ641Q2 1341 aa14.78□□□□□ -0.04
LMCD1-203ENST00000415597 GPR162Q16538 588 aa14.78□□□□□ -0.04
LMCD1-203ENST00000415597 SGIP1Q9BQI5 828 aa14.78□□□□□ -0.04
LMCD1-203ENST00000415597 KCNQ4P56696 695 aa14.77□□□□□ -0.05
LMCD1-203ENST00000415597 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.77□□□□□ -0.05
LMCD1-203ENST00000415597 PNPLA7Q6ZV29 1317 aa14.76□□□□□ -0.05
LMCD1-203ENST00000415597 TNNT2P45379 298 aaPredicted RBP14.76□□□□□ -0.05
LMCD1-203ENST00000415597 NSD2O96028 1365 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 MAP3K5Q99683 1374 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 KIF20BQ96Q89 1820 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 CYP27B1O15528 508 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 HSPA5P11021 654 aaKnown RBP14.74□□□□□ -0.05
LMCD1-203ENST00000415597 IFNL2Q8IZJ0 200 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 PELP1Q8IZL8 1130 aaKnown RBP14.74□□□□□ -0.05
LMCD1-203ENST00000415597 EYA1Q99502 592 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 PANK3Q9H999 370 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 TMOD3Q9NYL9 352 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 POLKQ9UBT6 870 aa14.74□□□□□ -0.05
LMCD1-203ENST00000415597 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
LMCD1-203ENST00000415597 AK7Q96M32 723 aa14.73□□□□□ -0.05
LMCD1-203ENST00000415597 NKX1-1Q15270 411 aaPredicted RBP14.72□□□□□ -0.05
LMCD1-203ENST00000415597 MORC1Q86VD1 984 aa14.72□□□□□ -0.05
LMCD1-203ENST00000415597 KNSTRNQ9Y448 316 aa14.72□□□□□ -0.05
LMCD1-203ENST00000415597 MYOM1P52179 1685 aa14.71□□□□□ -0.05
LMCD1-203ENST00000415597 PAPPAQ13219 1627 aa14.71□□□□□ -0.05
LMCD1-203ENST00000415597 RGPD2P0DJD1 1756 aa14.71□□□□□ -0.05
LMCD1-203ENST00000415597 HSP90AB1P08238 724 aaKnown RBP14.71□□□□□ -0.05
LMCD1-203ENST00000415597 COL23A1Q86Y22 540 aaPredicted RBP14.71□□□□□ -0.05
LMCD1-203ENST00000415597 DOT1LQ8TEK3 1739 aa14.71□□□□□ -0.05
LMCD1-203ENST00000415597 GRIN3BO60391 1043 aa14.7□□□□□ -0.06
LMCD1-203ENST00000415597 PLEKHO1Q53GL0 409 aaPredicted RBP14.7□□□□□ -0.06
LMCD1-203ENST00000415597 PIGBQ92521 554 aa14.7□□□□□ -0.06
LMCD1-203ENST00000415597 EIF4A2Q14240 407 aaKnown RBP14.69□□□□□ -0.06
LMCD1-203ENST00000415597 AMOTQ4VCS5 1084 aa14.69□□□□□ -0.06
LMCD1-203ENST00000415597 LOC102724428A0A0B4J2F2 783 aa14.68□□□□□ -0.06
LMCD1-203ENST00000415597 PHKG2P15735 406 aa14.68□□□□□ -0.06
LMCD1-203ENST00000415597 SIK1P57059 783 aa14.68□□□□□ -0.06
LMCD1-203ENST00000415597 ATP6V1AP38606 617 aa14.67□□□□□ -0.06
LMCD1-203ENST00000415597 MSL1Q68DK7 614 aa14.67□□□□□ -0.06
LMCD1-203ENST00000415597 PLEKHG2Q9H7P9 1386 aa14.67□□□□□ -0.06
LMCD1-203ENST00000415597 LY75O60449 1722 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 ERVV-2B6SEH9 535 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 PHF14O94880 888 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 C1orf141Q5JVX7 400 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 ZNF784Q8NCA9 323 aaPredicted RBP14.66□□□□□ -0.06
LMCD1-203ENST00000415597 DCAF5Q96JK2 942 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 CD2APQ9Y5K6 639 aa14.66□□□□□ -0.06
LMCD1-203ENST00000415597 MAP2P11137 1827 aaKnown RBP14.65□□□□□ -0.06
LMCD1-203ENST00000415597 SSFA2P28290 1259 aa14.65□□□□□ -0.06
LMCD1-203ENST00000415597 QSER1Q2KHR3 1735 aa14.65□□□□□ -0.06
LMCD1-203ENST00000415597 NCAPD2Q15021 1401 aa14.65□□□□□ -0.06
LMCD1-203ENST00000415597 SHANK3Q9BYB0 1731 aa14.64□□□□□ -0.07
LMCD1-203ENST00000415597 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.64□□□□□ -0.07
LMCD1-203ENST00000415597 CABP4P57796 275 aa14.64□□□□□ -0.07
LMCD1-203ENST00000415597 ZNF530Q6P9A1 599 aaPredicted RBP14.64□□□□□ -0.07
LMCD1-203ENST00000415597 ASAP1Q9ULH1 1129 aa14.64□□□□□ -0.07
LMCD1-203ENST00000415597 IGSF1Q8N6C5 1336 aa14.64□□□□□ -0.07
LMCD1-203ENST00000415597 GNPATO15228 680 aa14.63□□□□□ -0.07
LMCD1-203ENST00000415597 MTHFSP49914 203 aa14.63□□□□□ -0.07
LMCD1-203ENST00000415597 NLGN2Q8NFZ4 835 aa14.63□□□□□ -0.07
LMCD1-203ENST00000415597 RBM42Q9BTD8 480 aaKnown RBP14.63□□□□□ -0.07
LMCD1-203ENST00000415597 RTCBQ9Y3I0 505 aaKnown RBP14.62□□□□□ -0.07
LMCD1-203ENST00000415597 TRAPPC3LQ5T215 181 aa14.61□□□□□ -0.07
LMCD1-203ENST00000415597 ATG3Q9NT62 314 aa14.61□□□□□ -0.07
LMCD1-203ENST00000415597 SULT6B1Q6IMI4 303 aa14.6□□□□□ -0.07
LMCD1-203ENST00000415597 PKD1L3Q7Z443 1732 aa14.6□□□□□ -0.07
LMCD1-203ENST00000415597 NLGN1Q8N2Q7 840 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms