RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 IFT57Q9NWB7 429 aa18.51■□□□□ 0.55
HMGA1P1-201ENST00000415560 SPG7Q9UQ90 795 aa18.51■□□□□ 0.55
HMGA1P1-201ENST00000415560 C1orf141Q5JVX7 400 aa18.5■□□□□ 0.55
HMGA1P1-201ENST00000415560 CARD10Q9BWT7 1032 aa18.5■□□□□ 0.55
HMGA1P1-201ENST00000415560 BTG4Q9NY30 223 aa18.5■□□□□ 0.55
HMGA1P1-201ENST00000415560 LAS1LQ9Y4W2 734 aaKnown RBP18.5■□□□□ 0.55
HMGA1P1-201ENST00000415560 COL5A2P05997 1499 aaPredicted RBP18.5■□□□□ 0.55
HMGA1P1-201ENST00000415560 NUTM2BA6NNL0 878 aaPredicted RBP18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 NUTM2EB1AL46 878 aaPredicted RBP18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 CT47B1P0C2W7 299 aaPredicted RBP18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 AKAP4Q5JQC9 854 aa18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 NUTM2AQ8IVF1 878 aaPredicted RBP18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 CFAP44Q96MT7 982 aa18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.49■□□□□ 0.55
HMGA1P1-201ENST00000415560 MAP3K5Q99683 1374 aa18.48■□□□□ 0.55
HMGA1P1-201ENST00000415560 ZNF530Q6P9A1 599 aaPredicted RBP18.48■□□□□ 0.55
HMGA1P1-201ENST00000415560 ADAMTS2O95450 1211 aa18.47■□□□□ 0.55
HMGA1P1-201ENST00000415560 MCM10Q7L590 875 aa18.47■□□□□ 0.55
HMGA1P1-201ENST00000415560 SPATA31A6Q5VVP1 1343 aa18.47■□□□□ 0.55
HMGA1P1-201ENST00000415560 DCTN1Q14203 1278 aa18.46■□□□□ 0.55
HMGA1P1-201ENST00000415560 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.46■□□□□ 0.55
HMGA1P1-201ENST00000415560 FANCIQ9NVI1 1328 aa18.46■□□□□ 0.55
HMGA1P1-201ENST00000415560 ZNF853P0CG23 659 aa18.45■□□□□ 0.54
HMGA1P1-201ENST00000415560 THUMPD2Q9BTF0 503 aaKnown RBP18.45■□□□□ 0.54
HMGA1P1-201ENST00000415560 CRB1P82279 1406 aa18.45■□□□□ 0.54
HMGA1P1-201ENST00000415560 LARP1Q6PKG0 1096 aaKnown RBP18.44■□□□□ 0.54
HMGA1P1-201ENST00000415560 TSR2Q969E8 191 aaKnown RBP18.44■□□□□ 0.54
HMGA1P1-201ENST00000415560 BABAM1Q9NWV8 329 aa18.44■□□□□ 0.54
HMGA1P1-201ENST00000415560 IL2RBP14784 551 aa18.43■□□□□ 0.54
HMGA1P1-201ENST00000415560 EXOSC9Q06265 439 aaKnown RBP18.43■□□□□ 0.54
HMGA1P1-201ENST00000415560 IFNL2Q8IZJ0 200 aa18.43■□□□□ 0.54
HMGA1P1-201ENST00000415560 HSP90AB1P08238 724 aaKnown RBP18.42■□□□□ 0.54
HMGA1P1-201ENST00000415560 FKBP8Q14318 412 aa18.42■□□□□ 0.54
HMGA1P1-201ENST00000415560 TAF7Q15545 349 aaPredicted RBP18.42■□□□□ 0.54
HMGA1P1-201ENST00000415560 PARP4Q9UKK3 1724 aaKnown RBP18.42■□□□□ 0.54
HMGA1P1-201ENST00000415560 RNF123Q5XPI4 1314 aa18.42■□□□□ 0.54
HMGA1P1-201ENST00000415560 CHL1O00533 1208 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 ERICH6BQ5W0A0 696 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 IL17REQ8NFR9 667 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 ZNF428Q96B54 188 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 MBIPQ9NS73 344 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 PLCH1Q4KWH8 1693 aa18.41■□□□□ 0.54
HMGA1P1-201ENST00000415560 HSPA1LP34931 641 aa18.4■□□□□ 0.54
HMGA1P1-201ENST00000415560 RRP1P56182 461 aaKnown RBP18.4■□□□□ 0.54
HMGA1P1-201ENST00000415560 TEFQ10587 303 aa18.4■□□□□ 0.54
HMGA1P1-201ENST00000415560 ZCRB1Q8TBF4 217 aaKnown RBP18.4■□□□□ 0.54
HMGA1P1-201ENST00000415560 NWD2Q9ULI1 1742 aa18.4■□□□□ 0.54
HMGA1P1-201ENST00000415560 RNMTO43148 476 aaKnown RBP18.39■□□□□ 0.53
HMGA1P1-201ENST00000415560 NGLY1Q96IV0 654 aa18.39■□□□□ 0.53
HMGA1P1-201ENST00000415560 TSPYL4Q9UJ04 414 aa18.39■□□□□ 0.53
HMGA1P1-201ENST00000415560 THRAP3Q9Y2W1 955 aaKnown RBP18.39■□□□□ 0.53
HMGA1P1-201ENST00000415560 CDCA7Q9BWT1 371 aaPredicted RBP18.38■□□□□ 0.53
HMGA1P1-201ENST00000415560 USP35Q9P2H5 1018 aa18.38■□□□□ 0.53
HMGA1P1-201ENST00000415560 OVOS2A0A0G2JMS6 1433 aa18.38■□□□□ 0.53
HMGA1P1-201ENST00000415560 MEGF6O75095 1541 aa18.38■□□□□ 0.53
HMGA1P1-201ENST00000415560 PKD1L3Q7Z443 1732 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 PHKG2P15735 406 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 MEX3CQ5U5Q3 659 aaKnown RBP18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 MPRIPQ6WCQ1 1025 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 LGR6Q9HBX8 967 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 PCDH11XQ9BZA7 1347 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 PCDH11YQ9BZA8 1340 aa18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 VIRMAQ69YN4 1812 aaKnown RBP18.37■□□□□ 0.53
HMGA1P1-201ENST00000415560 RARSP54136 660 aaKnown RBP18.36■□□□□ 0.53
HMGA1P1-201ENST00000415560 CEMIPQ8WUJ3 1361 aa18.36■□□□□ 0.53
HMGA1P1-201ENST00000415560 DCAF5Q96JK2 942 aa18.36■□□□□ 0.53
HMGA1P1-201ENST00000415560 C8orf37Q96NL8 207 aa18.36■□□□□ 0.53
HMGA1P1-201ENST00000415560 ALDH1L2Q3SY69 923 aa18.35■□□□□ 0.53
HMGA1P1-201ENST00000415560 UNC5CLQ8IV45 518 aa18.35■□□□□ 0.53
HMGA1P1-201ENST00000415560 CHMP4AQ9BY43 222 aa18.35■□□□□ 0.53
HMGA1P1-201ENST00000415560 LRRC37A3O60309 1634 aa18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 SLIT2O94813 1529 aa18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 CANXP27824 592 aaKnown RBP18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 TWISTNBQ3B726 338 aaPredicted RBP18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 ILDR1Q86SU0 546 aaPredicted RBP18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 CCDC9Q9Y3X0 531 aaKnown RBP18.34■□□□□ 0.53
HMGA1P1-201ENST00000415560 NRAPQ86VF7 1730 aa18.33■□□□□ 0.52
HMGA1P1-201ENST00000415560 EXOC5O00471 708 aa18.33■□□□□ 0.52
HMGA1P1-201ENST00000415560 VAMP4O75379 141 aa18.33■□□□□ 0.52
HMGA1P1-201ENST00000415560 SCN11AQ9UI33 1791 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 SOS1Q07889 1333 aaPredicted RBP18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 SPATA31A1Q5TZJ5 1347 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 BTBD11A6QL63 1104 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 CYP27B1O15528 508 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 BCAR3O75815 825 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 MS4A1P11836 297 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 IRX6P78412 446 aaPredicted RBP18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 MIS18AQ9NYP9 233 aa18.32■□□□□ 0.52
HMGA1P1-201ENST00000415560 FNBP4Q8N3X1 1017 aaPredicted RBP18.31■□□□□ 0.52
HMGA1P1-201ENST00000415560 SMC4Q9NTJ3 1288 aa18.31■□□□□ 0.52
HMGA1P1-201ENST00000415560 SPATA31A5Q5VU36 1347 aa18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 SPATA31A7Q8IWB4 1347 aa18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 ELL2O00472 640 aaPredicted RBP18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 IPO8O15397 1037 aaKnown RBP18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 NKX1-1Q15270 411 aaPredicted RBP18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 C8orf58Q8NAV2 365 aa18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 DDX54Q8TDD1 881 aaKnown RBP18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 ADAMTS7Q9UKP4 1686 aa18.3■□□□□ 0.52
HMGA1P1-201ENST00000415560 CABP4P57796 275 aa18.29■□□□□ 0.52
HMGA1P1-201ENST00000415560 VPS72Q15906 364 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms