RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 NBPF6Q5VWK0 638 aa14.83□□□□□ -0.03
RFFL-205ENST00000415395 NBPF4Q96M43 638 aa14.83□□□□□ -0.03
RFFL-205ENST00000415395 ZBTB7CA1YPR0 619 aa14.83□□□□□ -0.04
RFFL-205ENST00000415395 ZC3H6P61129 1189 aaKnown RBP14.83□□□□□ -0.04
RFFL-205ENST00000415395 MTHFSDQ2M296 383 aaKnown RBP14.83□□□□□ -0.04
RFFL-205ENST00000415395 ZNF428Q96B54 188 aa14.83□□□□□ -0.04
RFFL-205ENST00000415395 CFAP44Q96MT7 982 aa14.83□□□□□ -0.04
RFFL-205ENST00000415395 CENPQQ7L2Z9 268 aaPredicted RBP14.81□□□□□ -0.04
RFFL-205ENST00000415395 RTF1Q92541 710 aaKnown RBP14.81□□□□□ -0.04
RFFL-205ENST00000415395 TSR2Q969E8 191 aaKnown RBP14.81□□□□□ -0.04
RFFL-205ENST00000415395 AXIN2Q9Y2T1 843 aa14.81□□□□□ -0.04
RFFL-205ENST00000415395 KIAA0232Q92628 1395 aa14.81□□□□□ -0.04
RFFL-205ENST00000415395 RARSP54136 660 aaKnown RBP14.8□□□□□ -0.04
RFFL-205ENST00000415395 MAP3K5Q99683 1374 aa14.8□□□□□ -0.04
RFFL-205ENST00000415395 EXOSC9Q06265 439 aaKnown RBP14.8□□□□□ -0.04
RFFL-205ENST00000415395 AMOTQ4VCS5 1084 aa14.8□□□□□ -0.04
RFFL-205ENST00000415395 NPM2Q86SE8 214 aaKnown RBP14.8□□□□□ -0.04
RFFL-205ENST00000415395 CABLES1Q8TDN4 633 aa14.8□□□□□ -0.04
RFFL-205ENST00000415395 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
RFFL-205ENST00000415395 CRBNQ96SW2 442 aa14.8□□□□□ -0.04
RFFL-205ENST00000415395 CRB1P82279 1406 aa14.79□□□□□ -0.04
RFFL-205ENST00000415395 FAM83GA6ND36 823 aa14.79□□□□□ -0.04
RFFL-205ENST00000415395 GNAT3A8MTJ3 354 aa14.79□□□□□ -0.04
RFFL-205ENST00000415395 PHLPP1O60346 1717 aa14.78□□□□□ -0.04
RFFL-205ENST00000415395 PLEKHG5O94827 1062 aa14.78□□□□□ -0.04
RFFL-205ENST00000415395 THUMPD2Q9BTF0 503 aaKnown RBP14.78□□□□□ -0.04
RFFL-205ENST00000415395 PDE3AQ14432 1141 aa14.78□□□□□ -0.04
RFFL-205ENST00000415395 PLEKHO1Q53GL0 409 aaPredicted RBP14.78□□□□□ -0.04
RFFL-205ENST00000415395 USHBP1Q8N6Y0 703 aa14.78□□□□□ -0.04
RFFL-205ENST00000415395 MBIPQ9NS73 344 aa14.78□□□□□ -0.04
RFFL-205ENST00000415395 OVOS2A0A0G2JMS6 1433 aa14.77□□□□□ -0.04
RFFL-205ENST00000415395 VIRMAQ69YN4 1812 aaKnown RBP14.77□□□□□ -0.04
RFFL-205ENST00000415395 CHL1O00533 1208 aa14.77□□□□□ -0.05
RFFL-205ENST00000415395 TOM1O60784 492 aa14.77□□□□□ -0.05
RFFL-205ENST00000415395 BCAR3O75815 825 aa14.77□□□□□ -0.05
RFFL-205ENST00000415395 HAP1P54257 671 aaPredicted RBP14.77□□□□□ -0.05
RFFL-205ENST00000415395 ALDH1L2Q3SY69 923 aa14.77□□□□□ -0.05
RFFL-205ENST00000415395 BABAM1Q9NWV8 329 aa14.77□□□□□ -0.05
RFFL-205ENST00000415395 LAS1LQ9Y4W2 734 aaKnown RBP14.77□□□□□ -0.05
RFFL-205ENST00000415395 COL16A1Q07092 1604 aaPredicted RBP14.77□□□□□ -0.05
RFFL-205ENST00000415395 PLIN1O60240 522 aa14.76□□□□□ -0.05
RFFL-205ENST00000415395 DCTN1Q14203 1278 aa14.76□□□□□ -0.05
RFFL-205ENST00000415395 MCM10Q7L590 875 aa14.76□□□□□ -0.05
RFFL-205ENST00000415395 PRDM11Q9NQV5 511 aa14.76□□□□□ -0.05
RFFL-205ENST00000415395 DAXXQ9UER7 740 aaPredicted RBP14.76□□□□□ -0.05
RFFL-205ENST00000415395 BRPF1P55201 1214 aaPredicted RBP14.75□□□□□ -0.05
RFFL-205ENST00000415395 ADAMTS7Q9UKP4 1686 aa14.75□□□□□ -0.05
RFFL-205ENST00000415395 PKD1L3Q7Z443 1732 aa14.75□□□□□ -0.05
RFFL-205ENST00000415395 COL14A1Q05707 1796 aaKnown RBP14.75□□□□□ -0.05
RFFL-205ENST00000415395 COL5A2P05997 1499 aaPredicted RBP14.75□□□□□ -0.05
RFFL-205ENST00000415395 AKAP4Q5JQC9 854 aa14.75□□□□□ -0.05
RFFL-205ENST00000415395 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.75□□□□□ -0.05
RFFL-205ENST00000415395 PARP4Q9UKK3 1724 aaKnown RBP14.75□□□□□ -0.05
RFFL-205ENST00000415395 CEMIPQ8WUJ3 1361 aa14.74□□□□□ -0.05
RFFL-205ENST00000415395 CHRNA2Q15822 529 aa14.74□□□□□ -0.05
RFFL-205ENST00000415395 CSB-PGBD3P0DP91 1061 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 CANXP27824 592 aaKnown RBP14.73□□□□□ -0.05
RFFL-205ENST00000415395 RAPGEF4Q8WZA2 1011 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 NLRP2Q9NX02 1062 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 WDR17Q8IZU2 1322 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 KDM2BQ8NHM5 1336 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 KIF16BQ96L93 1317 aa14.73□□□□□ -0.05
RFFL-205ENST00000415395 VAMP4O75379 141 aa14.72□□□□□ -0.05
RFFL-205ENST00000415395 TATP17735 454 aaPredicted RBP14.72□□□□□ -0.05
RFFL-205ENST00000415395 AAMPQ13685 434 aa14.72□□□□□ -0.05
RFFL-205ENST00000415395 C1orf141Q5JVX7 400 aa14.72□□□□□ -0.05
RFFL-205ENST00000415395 ZNF530Q6P9A1 599 aaPredicted RBP14.72□□□□□ -0.05
RFFL-205ENST00000415395 SMC4Q9NTJ3 1288 aa14.72□□□□□ -0.05
RFFL-205ENST00000415395 SOS1Q07889 1333 aaPredicted RBP14.72□□□□□ -0.05
RFFL-205ENST00000415395 TWISTNBQ3B726 338 aaPredicted RBP14.71□□□□□ -0.05
RFFL-205ENST00000415395 FAM161AQ3B820 660 aa14.71□□□□□ -0.05
RFFL-205ENST00000415395 C20orf194Q5TEA3 1177 aa14.71□□□□□ -0.05
RFFL-205ENST00000415395 AEBP2Q6ZN18 517 aaPredicted RBP14.71□□□□□ -0.05
RFFL-205ENST00000415395 IL17REQ8NFR9 667 aa14.71□□□□□ -0.05
RFFL-205ENST00000415395 SSH1Q8WYL5 1049 aa14.71□□□□□ -0.05
RFFL-205ENST00000415395 KDM3BQ7LBC6 1761 aa14.71□□□□□ -0.06
RFFL-205ENST00000415395 SCN11AQ9UI33 1791 aa14.71□□□□□ -0.06
RFFL-205ENST00000415395 SIPA1L3O60292 1781 aaPredicted RBP14.7□□□□□ -0.06
RFFL-205ENST00000415395 MEGF6O75095 1541 aa14.7□□□□□ -0.06
RFFL-205ENST00000415395 ZKSCAN2Q63HK3 967 aa14.7□□□□□ -0.06
RFFL-205ENST00000415395 TSPYL4Q9UJ04 414 aa14.7□□□□□ -0.06
RFFL-205ENST00000415395 SPG7Q9UQ90 795 aa14.7□□□□□ -0.06
RFFL-205ENST00000415395 CACNA1FO60840 1977 aa14.7□□□□□ -0.06
RFFL-205ENST00000415395 IPO8O15397 1037 aaKnown RBP14.69□□□□□ -0.06
RFFL-205ENST00000415395 TAF7Q15545 349 aaPredicted RBP14.69□□□□□ -0.06
RFFL-205ENST00000415395 FRAT1Q92837 279 aaPredicted RBP14.69□□□□□ -0.06
RFFL-205ENST00000415395 TSPYL6Q8N831 410 aa14.68□□□□□ -0.06
RFFL-205ENST00000415395 C8orf58Q8NAV2 365 aa14.68□□□□□ -0.06
RFFL-205ENST00000415395 ARHGAP45Q92619 1136 aa14.68□□□□□ -0.06
RFFL-205ENST00000415395 CARD10Q9BWT7 1032 aa14.68□□□□□ -0.06
RFFL-205ENST00000415395 BCL2L13Q9BXK5 485 aa14.68□□□□□ -0.06
RFFL-205ENST00000415395 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
RFFL-205ENST00000415395 ATF7IPQ6VMQ6 1270 aa14.66□□□□□ -0.06
RFFL-205ENST00000415395 TOM1L2Q6ZVM7 507 aa14.66□□□□□ -0.06
RFFL-205ENST00000415395 PLCH1Q4KWH8 1693 aa14.66□□□□□ -0.06
RFFL-205ENST00000415395 MRPL50Q8N5N7 158 aaKnown RBP14.66□□□□□ -0.06
RFFL-205ENST00000415395 UBAP1LF5GYI3 381 aa14.65□□□□□ -0.06
RFFL-205ENST00000415395 HSP90AB1P08238 724 aaKnown RBP14.65□□□□□ -0.06
RFFL-205ENST00000415395 TEFQ10587 303 aa14.65□□□□□ -0.06
RFFL-205ENST00000415395 DZIP1LQ8IYY4 767 aaKnown RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms