RNA–Protein interactions for RNA: ENST00000415138.1

LINC01888-201, Transcript of long intergenic non-protein coding RNA 1888, humanhuman

TSL 2

Gene LINC01888, Length 436 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01888-201ENST00000415138 AHDC1Q5TGY3 1603 aaPredicted RBP12.84□□□□□ -0.35
LINC01888-201ENST00000415138 PLEKHG3A1L390 1219 aa12.84□□□□□ -0.35
LINC01888-201ENST00000415138 XPCQ01831 940 aaPredicted RBP12.84□□□□□ -0.35
LINC01888-201ENST00000415138 MMRN1Q13201 1228 aa12.84□□□□□ -0.35
LINC01888-201ENST00000415138 ZNF687Q8N1G0 1237 aa12.84□□□□□ -0.35
LINC01888-201ENST00000415138 DDX17Q92841 729 aaKnown RBP12.84□□□□□ -0.35
LINC01888-201ENST00000415138 NUDT7P0C024 238 aa12.83□□□□□ -0.36
LINC01888-201ENST00000415138 FOXK1P85037 733 aa12.83□□□□□ -0.36
LINC01888-201ENST00000415138 PLPP6Q8IY26 295 aa12.83□□□□□ -0.36
LINC01888-201ENST00000415138 NINLQ9Y2I6 1382 aa12.82□□□□□ -0.36
LINC01888-201ENST00000415138 AKAP12Q02952 1782 aa12.82□□□□□ -0.36
LINC01888-201ENST00000415138 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
LINC01888-201ENST00000415138 SLC12A5Q9H2X9 1139 aa12.81□□□□□ -0.36
LINC01888-201ENST00000415138 SOS2Q07890 1332 aaPredicted RBP12.81□□□□□ -0.36
LINC01888-201ENST00000415138 RBM19Q9Y4C8 960 aaKnown RBP12.8□□□□□ -0.36
LINC01888-201ENST00000415138 COL16A1Q07092 1604 aaPredicted RBP12.8□□□□□ -0.36
LINC01888-201ENST00000415138 KTN1Q86UP2 1357 aaKnown RBP12.8□□□□□ -0.36
LINC01888-201ENST00000415138 JCADQ9P266 1359 aa12.8□□□□□ -0.36
LINC01888-201ENST00000415138 GTPBP6O43824 516 aaPredicted RBP12.79□□□□□ -0.36
LINC01888-201ENST00000415138 DSG2Q14126 1118 aa12.79□□□□□ -0.36
LINC01888-201ENST00000415138 POLR3AO14802 1390 aaPredicted RBP12.79□□□□□ -0.36
LINC01888-201ENST00000415138 BRD4O60885 1362 aaPredicted RBP12.79□□□□□ -0.36
LINC01888-201ENST00000415138 ABTB2Q8N961 1025 aa12.78□□□□□ -0.36
LINC01888-201ENST00000415138 SBNO1A3KN83 1393 aa12.78□□□□□ -0.36
LINC01888-201ENST00000415138 PXDNQ92626 1479 aa12.78□□□□□ -0.36
LINC01888-201ENST00000415138 SHPRHQ149N8 1683 aa12.77□□□□□ -0.36
LINC01888-201ENST00000415138 MON2Q7Z3U7 1717 aa12.77□□□□□ -0.36
LINC01888-201ENST00000415138 RSPH6AQ9H0K4 717 aa12.77□□□□□ -0.37
LINC01888-201ENST00000415138 SPATA31A3Q5VYP0 1347 aa12.77□□□□□ -0.37
LINC01888-201ENST00000415138 ARHGEF10O15013 1369 aa12.77□□□□□ -0.37
LINC01888-201ENST00000415138 NUTM2BA6NNL0 878 aaPredicted RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 NUTM2EB1AL46 878 aaPredicted RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 AAMPQ13685 434 aa12.76□□□□□ -0.37
LINC01888-201ENST00000415138 MEX3CQ5U5Q3 659 aaKnown RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 NUTM2AQ8IVF1 878 aaPredicted RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 PTCD2Q8WV60 388 aaKnown RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 LHX6Q9UPM6 363 aa12.76□□□□□ -0.37
LINC01888-201ENST00000415138 TNS3Q68CZ2 1445 aa12.76□□□□□ -0.37
LINC01888-201ENST00000415138 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
LINC01888-201ENST00000415138 TBC1D12O60347 775 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 USP6P35125 1406 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 KIF7Q2M1P5 1343 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 SPATA31A6Q5VVP1 1343 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 NLRP13Q86W25 1043 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.75□□□□□ -0.37
LINC01888-201ENST00000415138 TTC21AQ8NDW8 1320 aa12.75□□□□□ -0.37
LINC01888-201ENST00000415138 YTHDC1Q96MU7 727 aaKnown RBP12.75□□□□□ -0.37
LINC01888-201ENST00000415138 MYOM1P52179 1685 aa12.74□□□□□ -0.37
LINC01888-201ENST00000415138 ANKRD36BQ8N2N9 1353 aa12.74□□□□□ -0.37
LINC01888-201ENST00000415138 C11orf95C9JLR9 678 aaPredicted RBP12.74□□□□□ -0.37
LINC01888-201ENST00000415138 ALS2Q96Q42 1657 aa12.73□□□□□ -0.37
LINC01888-201ENST00000415138 CPSF1Q10570 1443 aaKnown RBP12.73□□□□□ -0.37
LINC01888-201ENST00000415138 A0A1W2PP64 1363 aa12.73□□□□□ -0.37
LINC01888-201ENST00000415138 TTC21BQ7Z4L5 1316 aa12.73□□□□□ -0.37
LINC01888-201ENST00000415138 PDE4AP27815 886 aa12.73□□□□□ -0.37
LINC01888-201ENST00000415138 NUTM2GQ5VZR2 741 aa12.73□□□□□ -0.37
LINC01888-201ENST00000415138 EDC4Q6P2E9 1401 aaKnown RBP12.72□□□□□ -0.37
LINC01888-201ENST00000415138 PNPLA6Q8IY17 1366 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 CCDC7Q96M83 1385 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 CRISPLD2Q9H0B8 497 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 PANK3Q9H999 370 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 KNSTRNQ9Y448 316 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 COL22A1Q8NFW1 1626 aaPredicted RBP12.72□□□□□ -0.37
LINC01888-201ENST00000415138 KIF20BQ96Q89 1820 aa12.72□□□□□ -0.37
LINC01888-201ENST00000415138 ZMYND15Q9H091 742 aa12.71□□□□□ -0.37
LINC01888-201ENST00000415138 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.71□□□□□ -0.37
LINC01888-201ENST00000415138 MARF1Q9Y4F3 1742 aaKnown RBP12.71□□□□□ -0.38
LINC01888-201ENST00000415138 WASHC2AQ641Q2 1341 aa12.7□□□□□ -0.38
LINC01888-201ENST00000415138 ADAMTS2O95450 1211 aa12.7□□□□□ -0.38
LINC01888-201ENST00000415138 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
LINC01888-201ENST00000415138 COG3Q96JB2 828 aa12.7□□□□□ -0.38
LINC01888-201ENST00000415138 CD163L1Q9NR16 1453 aa12.7□□□□□ -0.38
LINC01888-201ENST00000415138 NRKQ7Z2Y5 1582 aa12.69□□□□□ -0.38
LINC01888-201ENST00000415138 CGNL1Q0VF96 1302 aa12.69□□□□□ -0.38
LINC01888-201ENST00000415138 PPP1R15BQ5SWA1 713 aa12.69□□□□□ -0.38
LINC01888-201ENST00000415138 KCNH5Q8NCM2 988 aa12.69□□□□□ -0.38
LINC01888-201ENST00000415138 CABLES1Q8TDN4 633 aa12.69□□□□□ -0.38
LINC01888-201ENST00000415138 PSDA5PKW4 1024 aaPredicted RBP12.68□□□□□ -0.38
LINC01888-201ENST00000415138 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
LINC01888-201ENST00000415138 NME9Q86XW9 330 aa12.68□□□□□ -0.38
LINC01888-201ENST00000415138 NSD3Q9BZ95 1437 aa12.68□□□□□ -0.38
LINC01888-201ENST00000415138 PIK3C2AO00443 1686 aa12.67□□□□□ -0.38
LINC01888-201ENST00000415138 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
LINC01888-201ENST00000415138 NGLY1Q96IV0 654 aa12.67□□□□□ -0.38
LINC01888-201ENST00000415138 PHRF1Q9P1Y6 1649 aaKnown RBP12.66□□□□□ -0.38
LINC01888-201ENST00000415138 ABCA3Q99758 1704 aa12.66□□□□□ -0.38
LINC01888-201ENST00000415138 MED1Q15648 1581 aaPredicted RBP12.66□□□□□ -0.38
LINC01888-201ENST00000415138 SSH2Q76I76 1423 aa12.66□□□□□ -0.38
LINC01888-201ENST00000415138 PBX2P40425 430 aa12.66□□□□□ -0.38
LINC01888-201ENST00000415138 C8orf37Q96NL8 207 aa12.66□□□□□ -0.38
LINC01888-201ENST00000415138 GCP02774 474 aa12.65□□□□□ -0.38
LINC01888-201ENST00000415138 UPF1Q92900 1129 aaKnown RBP eCLIP12.65□□□□□ -0.38
LINC01888-201ENST00000415138 LARP6Q9BRS8 491 aaKnown RBP12.65□□□□□ -0.38
LINC01888-201ENST00000415138 CARD14Q9BXL6 1004 aa12.65□□□□□ -0.38
LINC01888-201ENST00000415138 GGNBP2Q9H3C7 697 aa12.65□□□□□ -0.38
LINC01888-201ENST00000415138 PRDM11Q9NQV5 511 aa12.65□□□□□ -0.38
LINC01888-201ENST00000415138 FYB1O15117 783 aa12.64□□□□□ -0.39
LINC01888-201ENST00000415138 BRD2P25440 801 aaKnown RBP12.64□□□□□ -0.39
LINC01888-201ENST00000415138 ZC3H6P61129 1189 aaKnown RBP12.64□□□□□ -0.39
LINC01888-201ENST00000415138 ANKRD26Q9UPS8 1709 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms