RNA–Protein interactions for RNA: ENST00000415023.1

ITSN1-213, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 519 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-213ENST00000415023 IL2RBP14784 551 aa14.15□□□□□ -0.14
ITSN1-213ENST00000415023 PELP1Q8IZL8 1130 aaKnown RBP14.15□□□□□ -0.14
ITSN1-213ENST00000415023 KLHL34Q8N239 644 aa14.15□□□□□ -0.14
ITSN1-213ENST00000415023 DOT1LQ8TEK3 1739 aa14.15□□□□□ -0.14
ITSN1-213ENST00000415023 LTN1O94822 1766 aa14.14□□□□□ -0.15
ITSN1-213ENST00000415023 KCNQ4P56696 695 aa14.14□□□□□ -0.15
ITSN1-213ENST00000415023 SOX12O15370 315 aa14.13□□□□□ -0.15
ITSN1-213ENST00000415023 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.13□□□□□ -0.15
ITSN1-213ENST00000415023 TMC1Q8TDI8 760 aa14.13□□□□□ -0.15
ITSN1-213ENST00000415023 FAM208AQ9UK61 1670 aaKnown RBP14.13□□□□□ -0.15
ITSN1-213ENST00000415023 KAT6BQ8WYB5 2073 aa14.12□□□□□ -0.15
ITSN1-213ENST00000415023 SLC24A1O60721 1099 aa14.12□□□□□ -0.15
ITSN1-213ENST00000415023 CICQ96RK0 1608 aaPredicted RBP14.12□□□□□ -0.15
ITSN1-213ENST00000415023 ANKRD36BQ8N2N9 1353 aa14.11□□□□□ -0.15
ITSN1-213ENST00000415023 COL23A1Q86Y22 540 aaPredicted RBP14.11□□□□□ -0.15
ITSN1-213ENST00000415023 NLRP2Q9NX02 1062 aa14.11□□□□□ -0.15
ITSN1-213ENST00000415023 TERF2IPQ9NYB0 399 aa14.11□□□□□ -0.15
ITSN1-213ENST00000415023 KIF3CO14782 793 aa14.1□□□□□ -0.15
ITSN1-213ENST00000415023 HDGFL2Q7Z4V5 671 aaPredicted RBP14.1□□□□□ -0.15
ITSN1-213ENST00000415023 GPBP1L1Q9HC44 474 aaPredicted RBP14.1□□□□□ -0.15
ITSN1-213ENST00000415023 TFCP2L1Q9NZI6 479 aa14.1□□□□□ -0.15
ITSN1-213ENST00000415023 TOGARAM1Q9Y4F4 1720 aa14.1□□□□□ -0.15
ITSN1-213ENST00000415023 DNAJC5GQ8N7S2 189 aa14.09□□□□□ -0.15
ITSN1-213ENST00000415023 ANKRD24Q8TF21 1146 aa14.09□□□□□ -0.15
ITSN1-213ENST00000415023 CARD14Q9BXL6 1004 aa14.09□□□□□ -0.15
ITSN1-213ENST00000415023 TMF1P82094 1093 aa14.08□□□□□ -0.16
ITSN1-213ENST00000415023 CD2APQ9Y5K6 639 aa14.08□□□□□ -0.16
ITSN1-213ENST00000415023 C5P01031 1676 aa14.07□□□□□ -0.16
ITSN1-213ENST00000415023 FYB1O15117 783 aa14.07□□□□□ -0.16
ITSN1-213ENST00000415023 TAF1LQ8IZX4 1826 aa14.06□□□□□ -0.16
ITSN1-213ENST00000415023 FBLN1P23142 703 aa14.06□□□□□ -0.16
ITSN1-213ENST00000415023 PRIM1P49642 420 aaKnown RBP14.06□□□□□ -0.16
ITSN1-213ENST00000415023 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
ITSN1-213ENST00000415023 CCER1Q8TC90 406 aaPredicted RBP14.06□□□□□ -0.16
ITSN1-213ENST00000415023 MEGF6O75095 1541 aa14.05□□□□□ -0.16
ITSN1-213ENST00000415023 KIAA1551Q9HCM1 1747 aa14.04□□□□□ -0.16
ITSN1-213ENST00000415023 ZNF526Q8TF50 670 aaPredicted RBP14.04□□□□□ -0.16
ITSN1-213ENST00000415023 AMIGO3Q86WK7 504 aa14.03□□□□□ -0.16
ITSN1-213ENST00000415023 DDX54Q8TDD1 881 aaKnown RBP14.03□□□□□ -0.16
ITSN1-213ENST00000415023 CCNL1Q9UK58 526 aaPredicted RBP14.03□□□□□ -0.16
ITSN1-213ENST00000415023 KIF20BQ96Q89 1820 aa14.03□□□□□ -0.16
ITSN1-213ENST00000415023 RGPD2P0DJD1 1756 aa14.02□□□□□ -0.16
ITSN1-213ENST00000415023 MAP3K19Q56UN5 1328 aa14.02□□□□□ -0.17
ITSN1-213ENST00000415023 IP6K1Q92551 441 aa14.02□□□□□ -0.17
ITSN1-213ENST00000415023 UBR3Q6ZT12 1888 aa14.01□□□□□ -0.17
ITSN1-213ENST00000415023 HSPA5P11021 654 aaKnown RBP14.01□□□□□ -0.17
ITSN1-213ENST00000415023 APLP1P51693 650 aa14.01□□□□□ -0.17
ITSN1-213ENST00000415023 CDCA8Q53HL2 280 aa14.01□□□□□ -0.17
ITSN1-213ENST00000415023 WDR90Q96KV7 1748 aa14.01□□□□□ -0.17
ITSN1-213ENST00000415023 IGSF1Q8N6C5 1336 aa14□□□□□ -0.17
ITSN1-213ENST00000415023 GGNBP2Q9H3C7 697 aa14□□□□□ -0.17
ITSN1-213ENST00000415023 C4BP0C0L5 1744 aa14□□□□□ -0.17
ITSN1-213ENST00000415023 HOXC9P31274 260 aa13.99□□□□□ -0.17
ITSN1-213ENST00000415023 COG3Q96JB2 828 aa13.99□□□□□ -0.17
ITSN1-213ENST00000415023 KIF13BQ9NQT8 1826 aa13.99□□□□□ -0.17
ITSN1-213ENST00000415023 EIF4G2P78344 907 aaKnown RBP eCLIP13.98□□□□□ -0.17
ITSN1-213ENST00000415023 SYTL4Q96C24 671 aaPredicted RBP13.98□□□□□ -0.17
ITSN1-213ENST00000415023 MAP2P11137 1827 aaKnown RBP13.98□□□□□ -0.17
ITSN1-213ENST00000415023 NSD3Q9BZ95 1437 aa13.98□□□□□ -0.17
ITSN1-213ENST00000415023 COL13A1Q5TAT6 717 aaPredicted RBP13.97□□□□□ -0.17
ITSN1-213ENST00000415023 JMYQ8N9B5 988 aa13.97□□□□□ -0.17
ITSN1-213ENST00000415023 ANKRD26Q9UPS8 1709 aa13.97□□□□□ -0.17
ITSN1-213ENST00000415023 PXDNLA1KZ92 1463 aa13.96□□□□□ -0.17
ITSN1-213ENST00000415023 MSH5O43196 834 aa13.96□□□□□ -0.17
ITSN1-213ENST00000415023 RRS1Q15050 365 aaKnown RBP13.96□□□□□ -0.17
ITSN1-213ENST00000415023 ZCRB1Q8TBF4 217 aaKnown RBP13.96□□□□□ -0.17
ITSN1-213ENST00000415023 TOMM70O94826 608 aa13.95□□□□□ -0.18
ITSN1-213ENST00000415023 FLAD1Q8NFF5 587 aa13.95□□□□□ -0.18
ITSN1-213ENST00000415023 RTL1A6NKG5 1358 aa13.95□□□□□ -0.18
ITSN1-213ENST00000415023 PALLDQ8WX93 1383 aa13.95□□□□□ -0.18
ITSN1-213ENST00000415023 SMIM5Q71RC9 77 aa13.94□□□□□ -0.18
ITSN1-213ENST00000415023 ITGB4P16144 1822 aa13.93□□□□□ -0.18
ITSN1-213ENST00000415023 LTV1Q96GA3 475 aaPredicted RBP13.93□□□□□ -0.18
ITSN1-213ENST00000415023 WWC3Q9ULE0 1092 aa13.93□□□□□ -0.18
ITSN1-213ENST00000415023 BRCA1P38398 1863 aaKnown RBP13.93□□□□□ -0.18
ITSN1-213ENST00000415023 HSP90AB2PQ58FF8 381 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 NBPF6Q5VWK0 638 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 NBPF4Q96M43 638 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 NMRK2Q9NPI5 230 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 INSRP06213 1382 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 KIF24Q5T7B8 1368 aa13.92□□□□□ -0.18
ITSN1-213ENST00000415023 NCAPD2Q15021 1401 aa13.91□□□□□ -0.18
ITSN1-213ENST00000415023 KLRG1Q96E93 195 aa13.91□□□□□ -0.18
ITSN1-213ENST00000415023 C10orf71Q711Q0 1435 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 PKD1L3Q7Z443 1732 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 AMPHP49418 695 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 HTRA3P83110 453 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 PANK3Q9H999 370 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 N4BP2Q86UW6 1770 aaPredicted RBP13.9□□□□□ -0.18
ITSN1-213ENST00000415023 PCNTO95613 3336 aa13.9□□□□□ -0.18
ITSN1-213ENST00000415023 CGNL1Q0VF96 1302 aa13.9□□□□□ -0.19
ITSN1-213ENST00000415023 FLT4P35916 1363 aa13.89□□□□□ -0.19
ITSN1-213ENST00000415023 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.89□□□□□ -0.19
ITSN1-213ENST00000415023 PRELPP51888 382 aa13.89□□□□□ -0.19
ITSN1-213ENST00000415023 RBM46Q8TBY0 533 aaKnown RBP13.89□□□□□ -0.19
ITSN1-213ENST00000415023 POLKQ9UBT6 870 aa13.89□□□□□ -0.19
ITSN1-213ENST00000415023 KIF7Q2M1P5 1343 aa13.89□□□□□ -0.19
ITSN1-213ENST00000415023 CYP27B1O15528 508 aa13.88□□□□□ -0.19
ITSN1-213ENST00000415023 SSFA2P28290 1259 aa13.88□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms