RNA–Protein interactions for RNA: ENST00000414317.6

SNCAIP-206, Transcript of synuclein alpha interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SNCAIP, Length 1,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-206ENST00000414317 BCL9O00512 1426 aa18.16■□□□□ 0.5
SNCAIP-206ENST00000414317 DIAPH1O60610 1272 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-206ENST00000414317 TRIM37O94972 964 aa18.16■□□□□ 0.5
SNCAIP-206ENST00000414317 DDX54Q8TDD1 881 aaKnown RBP18.16■□□□□ 0.5
SNCAIP-206ENST00000414317 CFAP53Q96M91 514 aa18.15■□□□□ 0.5
SNCAIP-206ENST00000414317 TNS1Q9HBL0 1735 aaKnown RBP18.15■□□□□ 0.5
SNCAIP-206ENST00000414317 RALBP1Q15311 655 aa18.14■□□□□ 0.49
SNCAIP-206ENST00000414317 COL3A1P02461 1466 aaPredicted RBP18.14■□□□□ 0.49
SNCAIP-206ENST00000414317 PKD1L3Q7Z443 1732 aa18.14■□□□□ 0.49
SNCAIP-206ENST00000414317 SULT6B1Q6IMI4 303 aa18.13■□□□□ 0.49
SNCAIP-206ENST00000414317 PCDH11XQ9BZA7 1347 aa18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 PCDH11YQ9BZA8 1340 aa18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 BAG6P46379 1132 aa18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 AEBP1Q8IUX7 1158 aa18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 SPG7Q9UQ90 795 aa18.12■□□□□ 0.49
SNCAIP-206ENST00000414317 KDRP35968 1356 aa18.11■□□□□ 0.49
SNCAIP-206ENST00000414317 DEFB132Q7Z7B7 95 aa18.11■□□□□ 0.49
SNCAIP-206ENST00000414317 PLEKHG2Q9H7P9 1386 aa18.11■□□□□ 0.49
SNCAIP-206ENST00000414317 APBA3O96018 575 aa18.09■□□□□ 0.49
SNCAIP-206ENST00000414317 BCL11BQ9C0K0 894 aaPredicted RBP18.09■□□□□ 0.49
SNCAIP-206ENST00000414317 NHSQ6T4R5 1651 aa18.09■□□□□ 0.49
SNCAIP-206ENST00000414317 U2SURPO15042 1029 aaKnown RBP18.08■□□□□ 0.49
SNCAIP-206ENST00000414317 HMOX1P09601 288 aa18.08■□□□□ 0.49
SNCAIP-206ENST00000414317 ACSBG1Q96GR2 724 aa18.08■□□□□ 0.49
SNCAIP-206ENST00000414317 CYP27B1O15528 508 aa18.08■□□□□ 0.48
SNCAIP-206ENST00000414317 NUDCQ9Y266 331 aa18.08■□□□□ 0.48
SNCAIP-206ENST00000414317 DOT1LQ8TEK3 1739 aa18.07■□□□□ 0.48
SNCAIP-206ENST00000414317 EN1Q05925 392 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-206ENST00000414317 PLEKHO1Q53GL0 409 aaPredicted RBP18.07■□□□□ 0.48
SNCAIP-206ENST00000414317 KCNQ2O43526 872 aa18.06■□□□□ 0.48
SNCAIP-206ENST00000414317 AMOTQ4VCS5 1084 aa18.06■□□□□ 0.48
SNCAIP-206ENST00000414317 PTF1AQ7RTS3 328 aa18.06■□□□□ 0.48
SNCAIP-206ENST00000414317 MYBBP1AQ9BQG0 1328 aaKnown RBP18.06■□□□□ 0.48
SNCAIP-206ENST00000414317 IFNL2Q8IZJ0 200 aa18.05■□□□□ 0.48
SNCAIP-206ENST00000414317 PRKRIP1Q9H875 184 aaPredicted RBP18.05■□□□□ 0.48
SNCAIP-206ENST00000414317 PHKG2P15735 406 aa18.04■□□□□ 0.48
SNCAIP-206ENST00000414317 BTAF1O14981 1849 aa18.04■□□□□ 0.48
SNCAIP-206ENST00000414317 PRIM1P49642 420 aaKnown RBP18.03■□□□□ 0.48
SNCAIP-206ENST00000414317 NKX1-1Q15270 411 aaPredicted RBP18.03■□□□□ 0.48
SNCAIP-206ENST00000414317 SYTL4Q96C24 671 aaPredicted RBP18.03■□□□□ 0.48
SNCAIP-206ENST00000414317 RGPD3A6NKT7 1758 aaPredicted RBP18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 RGPD4Q7Z3J3 1758 aa18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 U2AF1L5P0DN76 240 aaPredicted RBP18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 U2AF1Q01081 240 aaKnown RBP eCLIP18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 EZH2Q15910 746 aaKnown RBP18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 ZNF530Q6P9A1 599 aaPredicted RBP18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 CAMKK2Q96RR4 588 aa18.02■□□□□ 0.48
SNCAIP-206ENST00000414317 PLSCR1O15162 318 aa18.01■□□□□ 0.47
SNCAIP-206ENST00000414317 ITGB4P16144 1822 aa18.01■□□□□ 0.47
SNCAIP-206ENST00000414317 TOGARAM1Q9Y4F4 1720 aa18■□□□□ 0.47
SNCAIP-206ENST00000414317 C1orf141Q5JVX7 400 aa18■□□□□ 0.47
SNCAIP-206ENST00000414317 HSP90AB1P08238 724 aaKnown RBP18■□□□□ 0.47
SNCAIP-206ENST00000414317 RSPH6AQ9H0K4 717 aa17.99■□□□□ 0.47
SNCAIP-206ENST00000414317 RREB1Q92766 1687 aa17.99■□□□□ 0.47
SNCAIP-206ENST00000414317 PRKAR2BP31323 418 aa17.98■□□□□ 0.47
SNCAIP-206ENST00000414317 FCHSD2O94868 740 aa17.97■□□□□ 0.47
SNCAIP-206ENST00000414317 MTHFSDQ2M296 383 aaKnown RBP17.97■□□□□ 0.47
SNCAIP-206ENST00000414317 DCAF5Q96JK2 942 aa17.97■□□□□ 0.47
SNCAIP-206ENST00000414317 AKAP4Q5JQC9 854 aa17.96■□□□□ 0.47
SNCAIP-206ENST00000414317 MPRIPQ6WCQ1 1025 aa17.96■□□□□ 0.47
SNCAIP-206ENST00000414317 ANP32CO43423 234 aa17.96■□□□□ 0.46
SNCAIP-206ENST00000414317 VIRMAQ69YN4 1812 aaKnown RBP17.95■□□□□ 0.46
SNCAIP-206ENST00000414317 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
SNCAIP-206ENST00000414317 GAS2L2Q8NHY3 880 aa17.95■□□□□ 0.46
SNCAIP-206ENST00000414317 KDM6AO15550 1401 aaPredicted RBP17.94■□□□□ 0.46
SNCAIP-206ENST00000414317 ERVV-2B6SEH9 535 aa17.94■□□□□ 0.46
SNCAIP-206ENST00000414317 TXNRD1Q16881 649 aa17.94■□□□□ 0.46
SNCAIP-206ENST00000414317 TMOD3Q9NYL9 352 aa17.94■□□□□ 0.46
SNCAIP-206ENST00000414317 SCN11AQ9UI33 1791 aa17.94■□□□□ 0.46
SNCAIP-206ENST00000414317 PROM2Q8N271 834 aa17.93■□□□□ 0.46
SNCAIP-206ENST00000414317 PIGBQ92521 554 aa17.93■□□□□ 0.46
SNCAIP-206ENST00000414317 PHACTR3Q96KR7 559 aa17.93■□□□□ 0.46
SNCAIP-206ENST00000414317 LY75O60449 1722 aa17.92■□□□□ 0.46
SNCAIP-206ENST00000414317 NEFMP07197 916 aa17.91■□□□□ 0.46
SNCAIP-206ENST00000414317 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
SNCAIP-206ENST00000414317 CABP4P57796 275 aa17.91■□□□□ 0.46
SNCAIP-206ENST00000414317 GNAT3A8MTJ3 354 aa17.9■□□□□ 0.46
SNCAIP-206ENST00000414317 WDR43Q15061 677 aaKnown RBP eCLIP17.9■□□□□ 0.46
SNCAIP-206ENST00000414317 NBPF14Q5TI25 921 aa17.9■□□□□ 0.46
SNCAIP-206ENST00000414317 SMARCC1Q92922 1105 aaPredicted RBP17.9■□□□□ 0.46
SNCAIP-206ENST00000414317 MAP3K5Q99683 1374 aa17.9■□□□□ 0.46
SNCAIP-206ENST00000414317 SLC27A3Q5K4L6 730 aa17.89■□□□□ 0.45
SNCAIP-206ENST00000414317 RNMTO43148 476 aaKnown RBP17.88■□□□□ 0.45
SNCAIP-206ENST00000414317 PLEKHF1Q96S99 279 aa17.88■□□□□ 0.45
SNCAIP-206ENST00000414317 LGR6Q9HBX8 967 aa17.88■□□□□ 0.45
SNCAIP-206ENST00000414317 ADAMTS7Q9UKP4 1686 aa17.88■□□□□ 0.45
SNCAIP-206ENST00000414317 PALLDQ8WX93 1383 aa17.88■□□□□ 0.45
SNCAIP-206ENST00000414317 NFATC2IPQ8NCF5 419 aa17.87■□□□□ 0.45
SNCAIP-206ENST00000414317 MAPK8IP3Q9UPT6 1336 aa17.87■□□□□ 0.45
SNCAIP-206ENST00000414317 LRRC4BQ9NT99 713 aa17.87■□□□□ 0.45
SNCAIP-206ENST00000414317 ASAP1Q9ULH1 1129 aa17.87■□□□□ 0.45
SNCAIP-206ENST00000414317 DLG5Q8TDM6 1919 aa17.86■□□□□ 0.45
SNCAIP-206ENST00000414317 SLC52A2Q9HAB3 445 aa17.86■□□□□ 0.45
SNCAIP-206ENST00000414317 ATG3Q9NT62 314 aa17.86■□□□□ 0.45
SNCAIP-206ENST00000414317 CCNL1Q9UK58 526 aaPredicted RBP17.86■□□□□ 0.45
SNCAIP-206ENST00000414317 MRC1P22897 1456 aa17.85■□□□□ 0.45
SNCAIP-206ENST00000414317 R3HDM1Q15032 1099 aaKnown RBP17.85■□□□□ 0.45
SNCAIP-206ENST00000414317 PSDA5PKW4 1024 aaPredicted RBP17.84■□□□□ 0.45
SNCAIP-206ENST00000414317 KCNQ4P56696 695 aa17.84■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms