RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 CRIPAKQ8N1N5 446 aa7.46□□□□□ -1.22
HMGB1P11-201ENST00000413899 ARID3AQ99856 593 aa7.46□□□□□ -1.22
HMGB1P11-201ENST00000413899 OSBPL3Q9H4L5 887 aa7.46□□□□□ -1.22
HMGB1P11-201ENST00000413899 VRTNQ9H8Y1 702 aa7.46□□□□□ -1.22
HMGB1P11-201ENST00000413899 NOD1Q9Y239 953 aa7.46□□□□□ -1.22
HMGB1P11-201ENST00000413899 RFX1P22670 979 aa7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 ADD1P35611 737 aaKnown RBP7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 CTC1Q2NKJ3 1217 aa7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 IRX2Q9BZI1 471 aaPredicted RBP7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 ZFAND3Q9H8U3 227 aa7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 MKRN1Q9UHC7 482 aaKnown RBP7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 PCDHGA11Q9Y5H2 935 aa7.45□□□□□ -1.22
HMGB1P11-201ENST00000413899 ATP1A2P50993 1020 aa7.44□□□□□ -1.22
HMGB1P11-201ENST00000413899 PKDCCQ504Y2 493 aa7.44□□□□□ -1.22
HMGB1P11-201ENST00000413899 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 FAM196BA6NMK8 535 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 CAPN5O15484 640 aaPredicted RBP7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 ATG7O95352 703 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 ADH1AP07327 375 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 GTF2IP78347 998 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 CLDN10P78369 228 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 CYP2U1Q7Z449 544 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 LARGE2Q8N3Y3 721 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 MEIOBQ8N635 442 aa7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 ESF1Q9H501 851 aaKnown RBP7.43□□□□□ -1.22
HMGB1P11-201ENST00000413899 ZBTB7BO15156 539 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 CBLBQ13191 982 aa7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 SIX5Q8N196 739 aa7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 OGFOD1Q8N543 542 aa7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 KDF1Q8NAX2 398 aaPredicted RBP7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 DNAAF2Q9NVR5 837 aaKnown RBP7.42□□□□□ -1.22
HMGB1P11-201ENST00000413899 WASLO00401 505 aaPredicted RBP7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 DKK1O94907 266 aa7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 GNRH1P01148 92 aa7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 RASA1P20936 1047 aa7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 PTK7Q13308 1070 aa7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 ELOAQ14241 798 aaKnown RBP7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 LARP1Q6PKG0 1096 aaKnown RBP7.41□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L15C9J2P7 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L10C9JJH3 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L13C9JLJ4 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L12C9JPN9 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L11C9JVI0 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L21D6R901 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L18D6R9N7 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L22D6RA61 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L17D6RBQ6 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L19D6RCP7 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L20D6RJB6 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 USP17L24Q0WX57 530 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 CRTC2Q53ET0 693 aaPredicted RBP7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 KIAA1024Q9UPX6 916 aa7.4□□□□□ -1.22
HMGB1P11-201ENST00000413899 PTGIRP43119 386 aa7.39□□□□□ -1.23
HMGB1P11-201ENST00000413899 SCNN1DP51172 638 aa7.39□□□□□ -1.23
HMGB1P11-201ENST00000413899 TSEN34Q9BSV6 310 aaKnown RBP7.39□□□□□ -1.23
HMGB1P11-201ENST00000413899 AXIN1O15169 862 aa7.38□□□□□ -1.23
HMGB1P11-201ENST00000413899 CDCA8Q53HL2 280 aa7.38□□□□□ -1.23
HMGB1P11-201ENST00000413899 ESCO1Q5FWF5 840 aa7.38□□□□□ -1.23
HMGB1P11-201ENST00000413899 ANKMY2Q8IV38 441 aa7.38□□□□□ -1.23
HMGB1P11-201ENST00000413899 ARXQ96QS3 562 aa7.38□□□□□ -1.23
HMGB1P11-201ENST00000413899 ACIN1Q9UKV3 1341 aaKnown RBP7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 M0R2N6 131 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 PSME1Q06323 249 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 CCDC102BQ68D86 513 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 MRPL14Q6P1L8 145 aaKnown RBP7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 LINC00528Q8N1L1 170 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 XAGE2Q96GT9 111 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 AGBL1Q96MI9 1066 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 AAASQ9NRG9 546 aa7.37□□□□□ -1.23
HMGB1P11-201ENST00000413899 A0A1W2PRU2 124 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 TMEM229AB2RXF0 380 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 SPINT1O43278 529 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 INHAP05111 366 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 GDF10P55107 478 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 CLN3Q13286 438 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 TRIM46Q7Z4K8 759 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 TPCN2Q8NHX9 752 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 ZNF594Q96JF6 807 aaPredicted RBP7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 SLC4A9Q96Q91 983 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 ETNK1Q9HBU6 452 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 ARHGEF10LQ9HCE6 1279 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 HRH3Q9Y5N1 445 aa7.36□□□□□ -1.23
HMGB1P11-201ENST00000413899 UPP2O95045 317 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 IL2RAP01589 272 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 SEC13P55735 322 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 RELBQ01201 579 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 DPYDQ12882 1025 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 ESYT1Q9BSJ8 1104 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 ZMIZ1Q9ULJ6 1067 aa7.35□□□□□ -1.23
HMGB1P11-201ENST00000413899 BACH1O14867 736 aa7.34□□□□□ -1.23
HMGB1P11-201ENST00000413899 ST8SIA5O15466 376 aa7.34□□□□□ -1.23
HMGB1P11-201ENST00000413899 GPC1P35052 558 aa7.34□□□□□ -1.23
HMGB1P11-201ENST00000413899 FAM200AQ8TCP9 573 aa7.34□□□□□ -1.23
HMGB1P11-201ENST00000413899 ZNF358Q9NW07 568 aa7.34□□□□□ -1.23
HMGB1P11-201ENST00000413899 STAU1O95793 577 aaKnown RBP7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 BMP1P13497 986 aa7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 SCARF1Q14162 830 aa7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.33□□□□□ -1.24
HMGB1P11-201ENST00000413899 STK32AQ8WU08 396 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms