RNA–Protein interactions for RNA: ENST00000413587.5

ERGIC3-205, Transcript of ERGIC and golgi 3, humanhuman

TSL 5

Gene ERGIC3, Length 977 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-205ENST00000413587 YTHDC1Q96MU7 727 aaKnown RBP16.46■□□□□ 0.23
ERGIC3-205ENST00000413587 TNS2Q63HR2 1409 aa16.45■□□□□ 0.22
ERGIC3-205ENST00000413587 NBPF6Q5VWK0 638 aa16.45■□□□□ 0.22
ERGIC3-205ENST00000413587 NBPF4Q96M43 638 aa16.45■□□□□ 0.22
ERGIC3-205ENST00000413587 POLKQ9UBT6 870 aa16.45■□□□□ 0.22
ERGIC3-205ENST00000413587 KIF24Q5T7B8 1368 aa16.45■□□□□ 0.22
ERGIC3-205ENST00000413587 INSRP06213 1382 aa16.44■□□□□ 0.22
ERGIC3-205ENST00000413587 EXOC5O00471 708 aa16.44■□□□□ 0.22
ERGIC3-205ENST00000413587 TXNRD1Q16881 649 aa16.44■□□□□ 0.22
ERGIC3-205ENST00000413587 AMER1Q5JTC6 1135 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-205ENST00000413587 PPP1R1BQ9UD71 204 aaPredicted RBP16.44■□□□□ 0.22
ERGIC3-205ENST00000413587 FAM208AQ9UK61 1670 aaKnown RBP16.43■□□□□ 0.22
ERGIC3-205ENST00000413587 FLT4P35916 1363 aa16.43■□□□□ 0.22
ERGIC3-205ENST00000413587 IL2RBP14784 551 aa16.43■□□□□ 0.22
ERGIC3-205ENST00000413587 MRS2Q9HD23 443 aa16.43■□□□□ 0.22
ERGIC3-205ENST00000413587 PTGER2P43116 358 aa16.42■□□□□ 0.22
ERGIC3-205ENST00000413587 ZBTB7AO95365 584 aa16.41■□□□□ 0.22
ERGIC3-205ENST00000413587 ANKRD26Q9UPS8 1709 aa16.41■□□□□ 0.22
ERGIC3-205ENST00000413587 NSD2O96028 1365 aa16.4■□□□□ 0.22
ERGIC3-205ENST00000413587 YY1P25490 414 aa16.4■□□□□ 0.22
ERGIC3-205ENST00000413587 RGPD2P0DJD1 1756 aa16.4■□□□□ 0.22
ERGIC3-205ENST00000413587 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
ERGIC3-205ENST00000413587 TNNT2P45379 298 aaPredicted RBP16.39■□□□□ 0.21
ERGIC3-205ENST00000413587 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
ERGIC3-205ENST00000413587 USHBP1Q8N6Y0 703 aa16.39■□□□□ 0.21
ERGIC3-205ENST00000413587 MEGF6O75095 1541 aa16.39■□□□□ 0.21
ERGIC3-205ENST00000413587 NCAPD2Q15021 1401 aa16.38■□□□□ 0.21
ERGIC3-205ENST00000413587 ACSBG1Q96GR2 724 aa16.38■□□□□ 0.21
ERGIC3-205ENST00000413587 STK32BQ9NY57 414 aa16.38■□□□□ 0.21
ERGIC3-205ENST00000413587 SMG6Q86US8 1419 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 CCDC184Q52MB2 194 aa16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 PNISRQ8TF01 805 aaKnown RBP16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 SGIP1Q9BQI5 828 aa16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 ATF5Q9Y2D1 282 aaPredicted RBP16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 PAPPAQ13219 1627 aa16.37■□□□□ 0.21
ERGIC3-205ENST00000413587 PPM1GO15355 546 aaPredicted RBP16.36■□□□□ 0.21
ERGIC3-205ENST00000413587 MAP2P11137 1827 aaKnown RBP16.35■□□□□ 0.21
ERGIC3-205ENST00000413587 EYA1Q99502 592 aa16.35■□□□□ 0.21
ERGIC3-205ENST00000413587 EIF4A2Q14240 407 aaKnown RBP16.34■□□□□ 0.21
ERGIC3-205ENST00000413587 MORC1Q86VD1 984 aa16.34■□□□□ 0.21
ERGIC3-205ENST00000413587 CC2D1BQ5T0F9 858 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-205ENST00000413587 ZCRB1Q8TBF4 217 aaKnown RBP16.33■□□□□ 0.2
ERGIC3-205ENST00000413587 MTFR1LQ9H019 292 aa16.33■□□□□ 0.2
ERGIC3-205ENST00000413587 LRRC4BQ9NT99 713 aa16.33■□□□□ 0.2
ERGIC3-205ENST00000413587 BTAF1O14981 1849 aa16.33■□□□□ 0.2
ERGIC3-205ENST00000413587 UTRNP46939 3433 aa16.32■□□□□ 0.2
ERGIC3-205ENST00000413587 ZNF827Q17R98 1081 aa16.32■□□□□ 0.2
ERGIC3-205ENST00000413587 SHANK3Q9BYB0 1731 aa16.32■□□□□ 0.2
ERGIC3-205ENST00000413587 FHDC1Q9C0D6 1143 aaPredicted RBP16.32■□□□□ 0.2
ERGIC3-205ENST00000413587 DDX54Q8TDD1 881 aaKnown RBP16.31■□□□□ 0.2
ERGIC3-205ENST00000413587 SYT17Q9BSW7 474 aa16.31■□□□□ 0.2
ERGIC3-205ENST00000413587 FAM9BQ8IZU0 186 aa16.3■□□□□ 0.2
ERGIC3-205ENST00000413587 IGSF1Q8N6C5 1336 aa16.29■□□□□ 0.2
ERGIC3-205ENST00000413587 DCAF8L1A6NGE4 600 aa16.29■□□□□ 0.2
ERGIC3-205ENST00000413587 PPP2R1AP30153 589 aa16.29■□□□□ 0.2
ERGIC3-205ENST00000413587 CYP27B1O15528 508 aa16.28■□□□□ 0.2
ERGIC3-205ENST00000413587 TATP17735 454 aaPredicted RBP16.28■□□□□ 0.2
ERGIC3-205ENST00000413587 RAPGEF4Q8WZA2 1011 aa16.28■□□□□ 0.2
ERGIC3-205ENST00000413587 AKT1S1Q96B36 256 aa16.28■□□□□ 0.2
ERGIC3-205ENST00000413587 IL13P35225 146 aa16.27■□□□□ 0.2
ERGIC3-205ENST00000413587 HNRNPUQ00839 825 aaKnown RBP eCLIP16.27■□□□□ 0.2
ERGIC3-205ENST00000413587 MTHFSP49914 203 aa16.26■□□□□ 0.19
ERGIC3-205ENST00000413587 MAP3K5Q99683 1374 aa16.26■□□□□ 0.19
ERGIC3-205ENST00000413587 ZBED9Q6R2W3 1325 aa16.25■□□□□ 0.19
ERGIC3-205ENST00000413587 KCNQ4P56696 695 aa16.25■□□□□ 0.19
ERGIC3-205ENST00000413587 ARXQ96QS3 562 aa16.25■□□□□ 0.19
ERGIC3-205ENST00000413587 PRIM1P49642 420 aaKnown RBP16.24■□□□□ 0.19
ERGIC3-205ENST00000413587 CNGB1Q14028 1251 aaPredicted RBP16.24■□□□□ 0.19
ERGIC3-205ENST00000413587 SLC27A3Q5K4L6 730 aa16.24■□□□□ 0.19
ERGIC3-205ENST00000413587 AEBP1Q8IUX7 1158 aa16.24■□□□□ 0.19
ERGIC3-205ENST00000413587 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.24■□□□□ 0.19
ERGIC3-205ENST00000413587 PNPLA7Q6ZV29 1317 aa16.23■□□□□ 0.19
ERGIC3-205ENST00000413587 PKD1L3Q7Z443 1732 aa16.23■□□□□ 0.19
ERGIC3-205ENST00000413587 NKX1-1Q15270 411 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-205ENST00000413587 ZNF784Q8NCA9 323 aaPredicted RBP16.23■□□□□ 0.19
ERGIC3-205ENST00000413587 PCDH11XQ9BZA7 1347 aa16.22■□□□□ 0.19
ERGIC3-205ENST00000413587 PCDH11YQ9BZA8 1340 aa16.22■□□□□ 0.19
ERGIC3-205ENST00000413587 KAT6BQ8WYB5 2073 aa16.22■□□□□ 0.19
ERGIC3-205ENST00000413587 COL24A1Q17RW2 1714 aa16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 QSER1Q2KHR3 1735 aa16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 DOT1LQ8TEK3 1739 aa16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 KDRP35968 1356 aa16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 PLEKHG2Q9H7P9 1386 aa16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 COL3A1P02461 1466 aaPredicted RBP16.21■□□□□ 0.19
ERGIC3-205ENST00000413587 SYTL4Q96C24 671 aaPredicted RBP16.2■□□□□ 0.18
ERGIC3-205ENST00000413587 LY75O60449 1722 aa16.19■□□□□ 0.18
ERGIC3-205ENST00000413587 TUBGCP6Q96RT7 1819 aa16.19■□□□□ 0.18
ERGIC3-205ENST00000413587 PHKG2P15735 406 aa16.19■□□□□ 0.18
ERGIC3-205ENST00000413587 SLC16A10Q8TF71 515 aa16.19■□□□□ 0.18
ERGIC3-205ENST00000413587 SPG7Q9UQ90 795 aa16.19■□□□□ 0.18
ERGIC3-205ENST00000413587 NGEFQ8N5V2 710 aa16.18■□□□□ 0.18
ERGIC3-205ENST00000413587 TOGARAM1Q9Y4F4 1720 aa16.18■□□□□ 0.18
ERGIC3-205ENST00000413587 GOLGB1Q14789 3259 aaKnown RBP16.17■□□□□ 0.18
ERGIC3-205ENST00000413587 SULT6B1Q6IMI4 303 aa16.17■□□□□ 0.18
ERGIC3-205ENST00000413587 TFCP2L1Q9NZI6 479 aa16.17■□□□□ 0.18
ERGIC3-205ENST00000413587 WDR43Q15061 677 aaKnown RBP eCLIP16.16■□□□□ 0.18
ERGIC3-205ENST00000413587 DIAPH1O60610 1272 aaKnown RBP16.15■□□□□ 0.18
ERGIC3-205ENST00000413587 IFNL2Q8IZJ0 200 aa16.15■□□□□ 0.18
ERGIC3-205ENST00000413587 PIGBQ92521 554 aa16.15■□□□□ 0.18
ERGIC3-205ENST00000413587 CFAP53Q96M91 514 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms