RNA–Protein interactions for RNA: ENST00000413374.1

NCKIPSD-202, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 725 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-202ENST00000413374 CC2D1BQ5T0F9 858 aaKnown RBP13.91□□□□□ -0.18
NCKIPSD-202ENST00000413374 KIF24Q5T7B8 1368 aa13.91□□□□□ -0.18
NCKIPSD-202ENST00000413374 KCNQ4P56696 695 aa13.9□□□□□ -0.18
NCKIPSD-202ENST00000413374 AMER1Q5JTC6 1135 aaPredicted RBP13.9□□□□□ -0.18
NCKIPSD-202ENST00000413374 KIF20BQ96Q89 1820 aa13.9□□□□□ -0.18
NCKIPSD-202ENST00000413374 PDGFDQ9GZP0 370 aaPredicted RBP13.89□□□□□ -0.19
NCKIPSD-202ENST00000413374 STK32BQ9NY57 414 aa13.89□□□□□ -0.19
NCKIPSD-202ENST00000413374 WNK3Q9BYP7 1800 aa13.88□□□□□ -0.19
NCKIPSD-202ENST00000413374 CYP27B1O15528 508 aa13.88□□□□□ -0.19
NCKIPSD-202ENST00000413374 PER1O15534 1290 aaPredicted RBP13.88□□□□□ -0.19
NCKIPSD-202ENST00000413374 SRCAPQ6ZRS2 3230 aa13.88□□□□□ -0.19
NCKIPSD-202ENST00000413374 LRRC4BQ9NT99 713 aa13.87□□□□□ -0.19
NCKIPSD-202ENST00000413374 SPG7Q9UQ90 795 aa13.87□□□□□ -0.19
NCKIPSD-202ENST00000413374 NSD2O96028 1365 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 SLC15A2Q16348 729 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 MPRIPQ6WCQ1 1025 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 PCDH11XQ9BZA7 1347 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 PCDH11YQ9BZA8 1340 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 RGPD2P0DJD1 1756 aa13.86□□□□□ -0.19
NCKIPSD-202ENST00000413374 FAM208AQ9UK61 1670 aaKnown RBP13.85□□□□□ -0.19
NCKIPSD-202ENST00000413374 ZBTB7AO95365 584 aa13.85□□□□□ -0.19
NCKIPSD-202ENST00000413374 MTHFSP49914 203 aa13.84□□□□□ -0.19
NCKIPSD-202ENST00000413374 AEBP1Q8IUX7 1158 aa13.84□□□□□ -0.19
NCKIPSD-202ENST00000413374 ATF5Q9Y2D1 282 aaPredicted RBP13.84□□□□□ -0.19
NCKIPSD-202ENST00000413374 SBF2Q86WG5 1849 aa13.83□□□□□ -0.2
NCKIPSD-202ENST00000413374 ZNF827Q17R98 1081 aa13.83□□□□□ -0.2
NCKIPSD-202ENST00000413374 SPON1Q9HCB6 807 aa13.83□□□□□ -0.2
NCKIPSD-202ENST00000413374 IL13P35225 146 aa13.82□□□□□ -0.2
NCKIPSD-202ENST00000413374 SULT6B1Q6IMI4 303 aa13.82□□□□□ -0.2
NCKIPSD-202ENST00000413374 PPP1R1BQ9UD71 204 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-202ENST00000413374 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
NCKIPSD-202ENST00000413374 NUP188Q5SRE5 1749 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 PHKG2P15735 406 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 SLC27A3Q5K4L6 730 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 IFNL2Q8IZJ0 200 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 PIGBQ92521 554 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 IGSF1Q8N6C5 1336 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 RREB1Q92766 1687 aa13.81□□□□□ -0.2
NCKIPSD-202ENST00000413374 NKX1-1Q15270 411 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-202ENST00000413374 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
NCKIPSD-202ENST00000413374 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.8□□□□□ -0.2
NCKIPSD-202ENST00000413374 NHSQ6T4R5 1651 aa13.79□□□□□ -0.2
NCKIPSD-202ENST00000413374 MAP2P11137 1827 aaKnown RBP13.79□□□□□ -0.2
NCKIPSD-202ENST00000413374 HMOX1P09601 288 aa13.79□□□□□ -0.2
NCKIPSD-202ENST00000413374 AKT1S1Q96B36 256 aa13.79□□□□□ -0.2
NCKIPSD-202ENST00000413374 TFCP2L1Q9NZI6 479 aa13.79□□□□□ -0.2
NCKIPSD-202ENST00000413374 ZNF530Q6P9A1 599 aaPredicted RBP13.78□□□□□ -0.2
NCKIPSD-202ENST00000413374 TMOD3Q9NYL9 352 aa13.78□□□□□ -0.2
NCKIPSD-202ENST00000413374 NCAPD2Q15021 1401 aa13.78□□□□□ -0.2
NCKIPSD-202ENST00000413374 MSH5O43196 834 aa13.77□□□□□ -0.21
NCKIPSD-202ENST00000413374 DIAPH1O60610 1272 aaKnown RBP13.77□□□□□ -0.21
NCKIPSD-202ENST00000413374 ASAP1Q9ULH1 1129 aa13.77□□□□□ -0.21
NCKIPSD-202ENST00000413374 KAT6BQ8WYB5 2073 aa13.76□□□□□ -0.21
NCKIPSD-202ENST00000413374 PALLDQ8WX93 1383 aa13.76□□□□□ -0.21
NCKIPSD-202ENST00000413374 U2SURPO15042 1029 aaKnown RBP13.76□□□□□ -0.21
NCKIPSD-202ENST00000413374 AMOTQ4VCS5 1084 aa13.76□□□□□ -0.21
NCKIPSD-202ENST00000413374 BTAF1O14981 1849 aa13.76□□□□□ -0.21
NCKIPSD-202ENST00000413374 PTGER2P43116 358 aa13.75□□□□□ -0.21
NCKIPSD-202ENST00000413374 C1orf141Q5JVX7 400 aa13.75□□□□□ -0.21
NCKIPSD-202ENST00000413374 SMIM5Q71RC9 77 aa13.75□□□□□ -0.21
NCKIPSD-202ENST00000413374 SMARCC1Q92922 1105 aaPredicted RBP13.75□□□□□ -0.21
NCKIPSD-202ENST00000413374 MTFR1LQ9H019 292 aa13.75□□□□□ -0.21
NCKIPSD-202ENST00000413374 PNPLA7Q6ZV29 1317 aa13.74□□□□□ -0.21
NCKIPSD-202ENST00000413374 SHANK3Q9BYB0 1731 aa13.74□□□□□ -0.21
NCKIPSD-202ENST00000413374 ANKRD26Q9UPS8 1709 aa13.74□□□□□ -0.21
NCKIPSD-202ENST00000413374 CABP4P57796 275 aa13.74□□□□□ -0.21
NCKIPSD-202ENST00000413374 ATG3Q9NT62 314 aa13.74□□□□□ -0.21
NCKIPSD-202ENST00000413374 DOT1LQ8TEK3 1739 aa13.73□□□□□ -0.21
NCKIPSD-202ENST00000413374 HSP90AB1P08238 724 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-202ENST00000413374 DCAF5Q96JK2 942 aa13.73□□□□□ -0.21
NCKIPSD-202ENST00000413374 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
NCKIPSD-202ENST00000413374 LRP5O75197 1615 aa13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 LOC102724428A0A0B4J2F2 783 aa13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 ATP6V1AP38606 617 aa13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 SIK1P57059 783 aa13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 COL23A1Q86Y22 540 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 RGPD3A6NKT7 1758 aaPredicted RBP13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 RGPD4Q7Z3J3 1758 aa13.72□□□□□ -0.21
NCKIPSD-202ENST00000413374 NPC1L1Q9UHC9 1359 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 ERVV-2B6SEH9 535 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 PHF14O94880 888 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 PPP2R1AP30153 589 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 MTHFSDQ2M296 383 aaKnown RBP13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 NFATC2IPQ8NCF5 419 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 LGR6Q9HBX8 967 aa13.71□□□□□ -0.21
NCKIPSD-202ENST00000413374 ITPK1Q13572 414 aa13.7□□□□□ -0.22
NCKIPSD-202ENST00000413374 MSL1Q68DK7 614 aa13.7□□□□□ -0.22
NCKIPSD-202ENST00000413374 KLHL34Q8N239 644 aa13.7□□□□□ -0.22
NCKIPSD-202ENST00000413374 LINC00116Q8NCU8 138 aa13.7□□□□□ -0.22
NCKIPSD-202ENST00000413374 AK7Q96M32 723 aa13.7□□□□□ -0.22
NCKIPSD-202ENST00000413374 PTCD1O75127 700 aaKnown RBP13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 AKAP4Q5JQC9 854 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 AMIGO3Q86WK7 504 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 CFAP53Q96M91 514 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 ARXQ96QS3 562 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 SGIP1Q9BQI5 828 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 FHDC1Q9C0D6 1143 aaPredicted RBP13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 KDRP35968 1356 aa13.69□□□□□ -0.22
NCKIPSD-202ENST00000413374 DDX10Q13206 875 aaKnown RBP13.68□□□□□ -0.22
NCKIPSD-202ENST00000413374 SLC16A10Q8TF71 515 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms