RNA–Protein interactions for RNA: ENST00000413364.6

LITAF-203, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 2 BASIC

Gene LITAF, Length 2,292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-203ENST00000413364 FAM161AQ3B820 660 aa16.43■□□□□ 0.22
LITAF-203ENST00000413364 MRPL50Q8N5N7 158 aaKnown RBP16.43■□□□□ 0.22
LITAF-203ENST00000413364 BCL11BQ9C0K0 894 aaPredicted RBP16.43■□□□□ 0.22
LITAF-203ENST00000413364 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
LITAF-203ENST00000413364 NUTM2GQ5VZR2 741 aa16.42■□□□□ 0.22
LITAF-203ENST00000413364 TMEM57Q8N5G2 664 aa16.42■□□□□ 0.22
LITAF-203ENST00000413364 NWD1Q149M9 1564 aa16.42■□□□□ 0.22
LITAF-203ENST00000413364 ARHGAP45Q92619 1136 aa16.42■□□□□ 0.22
LITAF-203ENST00000413364 HOXC9P31274 260 aa16.41■□□□□ 0.22
LITAF-203ENST00000413364 C8orf58Q8NAV2 365 aa16.41■□□□□ 0.22
LITAF-203ENST00000413364 EYA1Q99502 592 aa16.41■□□□□ 0.22
LITAF-203ENST00000413364 DDRGK1Q96HY6 314 aa16.4■□□□□ 0.22
LITAF-203ENST00000413364 CHL1O00533 1208 aa16.4■□□□□ 0.22
LITAF-203ENST00000413364 C8orf34Q49A92 452 aa16.4■□□□□ 0.22
LITAF-203ENST00000413364 NAP1L5Q96NT1 182 aaPredicted RBP16.4■□□□□ 0.22
LITAF-203ENST00000413364 RTL1A6NKG5 1358 aa16.39■□□□□ 0.21
LITAF-203ENST00000413364 ELL2O00472 640 aaPredicted RBP16.39■□□□□ 0.21
LITAF-203ENST00000413364 ESCO1Q5FWF5 840 aa16.39■□□□□ 0.21
LITAF-203ENST00000413364 MCM10Q7L590 875 aa16.39■□□□□ 0.21
LITAF-203ENST00000413364 NPM2Q86SE8 214 aaKnown RBP16.39■□□□□ 0.21
LITAF-203ENST00000413364 HDAC1Q13547 482 aaPredicted RBP16.38■□□□□ 0.21
LITAF-203ENST00000413364 NFKBIBQ15653 356 aa16.38■□□□□ 0.21
LITAF-203ENST00000413364 C14orf37Q86TY3 774 aa16.38■□□□□ 0.21
LITAF-203ENST00000413364 ZBTB40Q9NUA8 1239 aa16.38■□□□□ 0.21
LITAF-203ENST00000413364 CRB1P82279 1406 aa16.38■□□□□ 0.21
LITAF-203ENST00000413364 PSME1Q06323 249 aa16.38■□□□□ 0.21
LITAF-203ENST00000413364 MTHFSDQ2M296 383 aaKnown RBP16.38■□□□□ 0.21
LITAF-203ENST00000413364 KIAA0232Q92628 1395 aa16.37■□□□□ 0.21
LITAF-203ENST00000413364 GAS2L2Q8NHY3 880 aa16.36■□□□□ 0.21
LITAF-203ENST00000413364 PDZRN3Q9UPQ7 1066 aa16.36■□□□□ 0.21
LITAF-203ENST00000413364 HAP1P54257 671 aaPredicted RBP16.36■□□□□ 0.21
LITAF-203ENST00000413364 NFAT5O94916 1531 aa16.36■□□□□ 0.21
LITAF-203ENST00000413364 ABCC4O15439 1325 aa16.35■□□□□ 0.21
LITAF-203ENST00000413364 FOXO3O43524 673 aa16.35■□□□□ 0.21
LITAF-203ENST00000413364 RTF1Q92541 710 aaKnown RBP16.35■□□□□ 0.21
LITAF-203ENST00000413364 PDCL3Q9H2J4 239 aa16.35■□□□□ 0.21
LITAF-203ENST00000413364 CHMP4BQ9H444 224 aaKnown RBP16.35■□□□□ 0.21
LITAF-203ENST00000413364 PRDM4Q9UKN5 801 aa16.35■□□□□ 0.21
LITAF-203ENST00000413364 PROSER2Q86WR7 435 aaPredicted RBP16.34■□□□□ 0.21
LITAF-203ENST00000413364 HTATSF1O43719 755 aaKnown RBP16.34■□□□□ 0.21
LITAF-203ENST00000413364 API5Q9BZZ5 524 aaKnown RBP16.34■□□□□ 0.21
LITAF-203ENST00000413364 RRAGDQ9NQL2 400 aaPredicted RBP16.34■□□□□ 0.21
LITAF-203ENST00000413364 KCNH5Q8NCM2 988 aa16.33■□□□□ 0.2
LITAF-203ENST00000413364 IP6K1Q92551 441 aa16.33■□□□□ 0.2
LITAF-203ENST00000413364 ORAI2Q96SN7 254 aa16.33■□□□□ 0.2
LITAF-203ENST00000413364 LTN1O94822 1766 aa16.32■□□□□ 0.2
LITAF-203ENST00000413364 ZBTB7BO15156 539 aaPredicted RBP16.31■□□□□ 0.2
LITAF-203ENST00000413364 CLCN1P35523 988 aa16.31■□□□□ 0.2
LITAF-203ENST00000413364 LTV1Q96GA3 475 aaPredicted RBP16.31■□□□□ 0.2
LITAF-203ENST00000413364 KRT24Q2M2I5 525 aa16.31■□□□□ 0.2
LITAF-203ENST00000413364 SMC5Q8IY18 1101 aa16.31■□□□□ 0.2
LITAF-203ENST00000413364 PHRF1Q9P1Y6 1649 aaKnown RBP16.3■□□□□ 0.2
LITAF-203ENST00000413364 VIRMAQ69YN4 1812 aaKnown RBP16.3■□□□□ 0.2
LITAF-203ENST00000413364 C19orf44Q9H6X5 657 aa16.3■□□□□ 0.2
LITAF-203ENST00000413364 LRRC37A3O60309 1634 aa16.3■□□□□ 0.2
LITAF-203ENST00000413364 GNAT3A8MTJ3 354 aa16.29■□□□□ 0.2
LITAF-203ENST00000413364 L1TD1Q5T7N2 865 aaKnown RBP16.29■□□□□ 0.2
LITAF-203ENST00000413364 TSPYL4Q9UJ04 414 aa16.29■□□□□ 0.2
LITAF-203ENST00000413364 C1orf167Q5SNV9 1468 aa16.29■□□□□ 0.2
LITAF-203ENST00000413364 KIF1AQ12756 1690 aa16.28■□□□□ 0.2
LITAF-203ENST00000413364 SLIT3O75094 1523 aa16.28■□□□□ 0.2
LITAF-203ENST00000413364 MAP3K5Q99683 1374 aa16.28■□□□□ 0.2
LITAF-203ENST00000413364 MIS18AQ9NYP9 233 aa16.28■□□□□ 0.2
LITAF-203ENST00000413364 MSH6P52701 1360 aa16.27■□□□□ 0.2
LITAF-203ENST00000413364 TRPM3Q9HCF6 1732 aaPredicted RBP16.27■□□□□ 0.19
LITAF-203ENST00000413364 XPCQ01831 940 aaPredicted RBP16.26■□□□□ 0.19
LITAF-203ENST00000413364 USP19O94966 1318 aa16.26■□□□□ 0.19
LITAF-203ENST00000413364 GCP02774 474 aa16.26■□□□□ 0.19
LITAF-203ENST00000413364 RGS12O14924 1447 aa16.26■□□□□ 0.19
LITAF-203ENST00000413364 PTPRCP08575 1304 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 INTS3Q68E01 1043 aaKnown RBP16.25■□□□□ 0.19
LITAF-203ENST00000413364 KRT28Q7Z3Y7 464 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 USHBP1Q8N6Y0 703 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 NBPF6Q5VWK0 638 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 ARHGEF25Q86VW2 580 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 NBPF4Q96M43 638 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 MST1RQ04912 1400 aa16.25■□□□□ 0.19
LITAF-203ENST00000413364 NUCB1Q02818 461 aa16.24■□□□□ 0.19
LITAF-203ENST00000413364 IL17REQ8NFR9 667 aa16.24■□□□□ 0.19
LITAF-203ENST00000413364 BABAM1Q9NWV8 329 aa16.24■□□□□ 0.19
LITAF-203ENST00000413364 NCOA3Q9Y6Q9 1424 aa16.24■□□□□ 0.19
LITAF-203ENST00000413364 DCCP43146 1447 aa16.23■□□□□ 0.19
LITAF-203ENST00000413364 ZBTB7CA1YPR0 619 aa16.23■□□□□ 0.19
LITAF-203ENST00000413364 TPM2P07951 284 aa16.23■□□□□ 0.19
LITAF-203ENST00000413364 NCLP19338 710 aaKnown RBP16.23■□□□□ 0.19
LITAF-203ENST00000413364 TMEM94Q12767 1356 aa16.23■□□□□ 0.19
LITAF-203ENST00000413364 C1orf115Q9H7X2 142 aa16.22■□□□□ 0.19
LITAF-203ENST00000413364 SLC4A2P04920 1241 aa16.22■□□□□ 0.19
LITAF-203ENST00000413364 ATF3P18847 181 aa16.22■□□□□ 0.19
LITAF-203ENST00000413364 GCC1Q96CN9 775 aa16.22■□□□□ 0.19
LITAF-203ENST00000413364 SOS1Q07889 1333 aaPredicted RBP16.22■□□□□ 0.19
LITAF-203ENST00000413364 TAF7Q15545 349 aaPredicted RBP16.21■□□□□ 0.19
LITAF-203ENST00000413364 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
LITAF-203ENST00000413364 KDM4FA0A1W2PPD8 638 aa16.21■□□□□ 0.19
LITAF-203ENST00000413364 SIRT2Q8IXJ6 389 aa16.21■□□□□ 0.19
LITAF-203ENST00000413364 STRCP1A6NGW2 1772 aa16.21■□□□□ 0.19
LITAF-203ENST00000413364 NCAPD2Q15021 1401 aa16.21■□□□□ 0.18
LITAF-203ENST00000413364 SEC24BO95487 1268 aa16.2■□□□□ 0.18
LITAF-203ENST00000413364 CEMIPQ8WUJ3 1361 aa16.2■□□□□ 0.18
LITAF-203ENST00000413364 CHD1LQ86WJ1 897 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms