RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 NLRP2Q9NX02 1062 aa13.57□□□□□ -0.24
SOX9-AS1-201ENST00000412640 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
SOX9-AS1-201ENST00000412640 PRIM1P49642 420 aaKnown RBP13.56□□□□□ -0.24
SOX9-AS1-201ENST00000412640 DDX54Q8TDD1 881 aaKnown RBP13.56□□□□□ -0.24
SOX9-AS1-201ENST00000412640 SRPK2P78362 688 aaKnown RBP13.55□□□□□ -0.24
SOX9-AS1-201ENST00000412640 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
SOX9-AS1-201ENST00000412640 CABP2Q9NPB3 220 aa13.54□□□□□ -0.24
SOX9-AS1-201ENST00000412640 PIK3C2AO00443 1686 aa13.53□□□□□ -0.24
SOX9-AS1-201ENST00000412640 ARHGAP27Q6ZUM4 889 aa13.53□□□□□ -0.24
SOX9-AS1-201ENST00000412640 KCNH5Q8NCM2 988 aa13.53□□□□□ -0.24
SOX9-AS1-201ENST00000412640 CABP1Q9NZU7 370 aa13.53□□□□□ -0.24
SOX9-AS1-201ENST00000412640 CICQ96RK0 1608 aaPredicted RBP13.53□□□□□ -0.24
SOX9-AS1-201ENST00000412640 DCAF11Q8TEB1 546 aa13.52□□□□□ -0.25
SOX9-AS1-201ENST00000412640 SIN3AQ96ST3 1273 aa13.52□□□□□ -0.25
SOX9-AS1-201ENST00000412640 LY75O60449 1722 aa13.52□□□□□ -0.25
SOX9-AS1-201ENST00000412640 SMIM5Q71RC9 77 aa13.51□□□□□ -0.25
SOX9-AS1-201ENST00000412640 RRAGCQ9HB90 399 aa13.51□□□□□ -0.25
SOX9-AS1-201ENST00000412640 BCS1LQ9Y276 419 aa13.51□□□□□ -0.25
SOX9-AS1-201ENST00000412640 NSD2O96028 1365 aa13.5□□□□□ -0.25
SOX9-AS1-201ENST00000412640 ANKRD36BQ8N2N9 1353 aa13.49□□□□□ -0.25
SOX9-AS1-201ENST00000412640 ERBB3P21860 1342 aa13.49□□□□□ -0.25
SOX9-AS1-201ENST00000412640 C9orf131Q5VYM1 1079 aa13.49□□□□□ -0.25
SOX9-AS1-201ENST00000412640 KCPQ6ZWJ8 1503 aa13.49□□□□□ -0.25
SOX9-AS1-201ENST00000412640 SMC1BQ8NDV3 1235 aa13.48□□□□□ -0.25
SOX9-AS1-201ENST00000412640 FLAD1Q8NFF5 587 aa13.48□□□□□ -0.25
SOX9-AS1-201ENST00000412640 ZNF316A6NFI3 1004 aaPredicted RBP13.47□□□□□ -0.25
SOX9-AS1-201ENST00000412640 AMIGO3Q86WK7 504 aa13.47□□□□□ -0.25
SOX9-AS1-201ENST00000412640 NFAT5O94916 1531 aa13.47□□□□□ -0.25
SOX9-AS1-201ENST00000412640 TTC21BQ7Z4L5 1316 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 KDM2BQ8NHM5 1336 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 A0A0G2JLW4 131 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 PHF14O94880 888 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 NEUROD1Q13562 356 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 ANKRD24Q8TF21 1146 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 DOT1LQ8TEK3 1739 aa13.46□□□□□ -0.25
SOX9-AS1-201ENST00000412640 USP47Q96K76 1375 aa13.45□□□□□ -0.26
SOX9-AS1-201ENST00000412640 FOXN1O15353 648 aa13.45□□□□□ -0.26
SOX9-AS1-201ENST00000412640 TONSLQ96HA7 1378 aa13.45□□□□□ -0.26
SOX9-AS1-201ENST00000412640 PXDNLA1KZ92 1463 aa13.44□□□□□ -0.26
SOX9-AS1-201ENST00000412640 C5P01031 1676 aa13.44□□□□□ -0.26
SOX9-AS1-201ENST00000412640 USP54Q70EL1 1684 aa13.44□□□□□ -0.26
SOX9-AS1-201ENST00000412640 FCHSD2O94868 740 aa13.43□□□□□ -0.26
SOX9-AS1-201ENST00000412640 QRICH2Q9H0J4 1663 aa13.43□□□□□ -0.26
SOX9-AS1-201ENST00000412640 PLEKHG2Q9H7P9 1386 aa13.43□□□□□ -0.26
SOX9-AS1-201ENST00000412640 N4BP2Q86UW6 1770 aaPredicted RBP13.43□□□□□ -0.26
SOX9-AS1-201ENST00000412640 AK7Q96M32 723 aa13.42□□□□□ -0.26
SOX9-AS1-201ENST00000412640 PRDM10Q9NQV6 1147 aa13.42□□□□□ -0.26
SOX9-AS1-201ENST00000412640 C10orf71Q711Q0 1435 aa13.41□□□□□ -0.26
SOX9-AS1-201ENST00000412640 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.41□□□□□ -0.26
SOX9-AS1-201ENST00000412640 MLLT1Q03111 559 aaPredicted RBP13.41□□□□□ -0.26
SOX9-AS1-201ENST00000412640 RNF181Q9P0P0 153 aa13.41□□□□□ -0.26
SOX9-AS1-201ENST00000412640 TGFB2P61812 414 aa13.4□□□□□ -0.26
SOX9-AS1-201ENST00000412640 ABHD8Q96I13 439 aa13.4□□□□□ -0.26
SOX9-AS1-201ENST00000412640 MKRN1Q9UHC7 482 aaKnown RBP13.4□□□□□ -0.26
SOX9-AS1-201ENST00000412640 KIAA1551Q9HCM1 1747 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 MMP10P09238 476 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 DPEP1P16444 411 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 LTV1Q96GA3 475 aaPredicted RBP13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 PKD1L3Q7Z443 1732 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 TOGARAM1Q9Y4F4 1720 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 TTC21AQ8NDW8 1320 aa13.39□□□□□ -0.27
SOX9-AS1-201ENST00000412640 ZCRB1Q8TBF4 217 aaKnown RBP13.38□□□□□ -0.27
SOX9-AS1-201ENST00000412640 ZNF692Q9BU19 519 aaPredicted RBP13.38□□□□□ -0.27
SOX9-AS1-201ENST00000412640 TAF1LQ8IZX4 1826 aa13.38□□□□□ -0.27
SOX9-AS1-201ENST00000412640 C4BP0C0L5 1744 aa13.38□□□□□ -0.27
SOX9-AS1-201ENST00000412640 CENPJQ9HC77 1338 aaPredicted RBP13.38□□□□□ -0.27
SOX9-AS1-201ENST00000412640 TNRC6CQ9HCJ0 1690 aaKnown RBP13.37□□□□□ -0.27
SOX9-AS1-201ENST00000412640 NBPF1Q3BBV0 1214 aa13.37□□□□□ -0.27
SOX9-AS1-201ENST00000412640 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
SOX9-AS1-201ENST00000412640 PALLDQ8WX93 1383 aa13.36□□□□□ -0.27
SOX9-AS1-201ENST00000412640 CTCFP49711 727 aaPredicted RBP13.36□□□□□ -0.27
SOX9-AS1-201ENST00000412640 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.36□□□□□ -0.27
SOX9-AS1-201ENST00000412640 LBX1P52954 281 aa13.35□□□□□ -0.27
SOX9-AS1-201ENST00000412640 UBR3Q6ZT12 1888 aa13.35□□□□□ -0.27
SOX9-AS1-201ENST00000412640 LTN1O94822 1766 aa13.35□□□□□ -0.27
SOX9-AS1-201ENST00000412640 KIF13BQ9NQT8 1826 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 CCDC85CA6NKD9 419 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 VEGFAP15692 232 aaPredicted RBP13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 KCNA3P22001 575 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 HMGB2P26583 209 aaKnown RBP13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 SSFA2P28290 1259 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 MPRIPQ6WCQ1 1025 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 L3MBTL2Q969R5 705 aa13.34□□□□□ -0.27
SOX9-AS1-201ENST00000412640 KTN1Q86UP2 1357 aaKnown RBP13.33□□□□□ -0.27
SOX9-AS1-201ENST00000412640 NME9Q86XW9 330 aa13.33□□□□□ -0.28
SOX9-AS1-201ENST00000412640 AIDAQ96BJ3 306 aa13.33□□□□□ -0.28
SOX9-AS1-201ENST00000412640 KIAA1210Q9ULL0 1709 aa13.33□□□□□ -0.28
SOX9-AS1-201ENST00000412640 RGS19P49795 217 aa13.32□□□□□ -0.28
SOX9-AS1-201ENST00000412640 NSD3Q9BZ95 1437 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 MEGF6O75095 1541 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 GNPATO15228 680 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 LINC00116Q8NCU8 138 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 DCAF5Q96JK2 942 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 CREBZFQ9NS37 354 aa13.31□□□□□ -0.28
SOX9-AS1-201ENST00000412640 BRCA1P38398 1863 aaKnown RBP13.3□□□□□ -0.28
SOX9-AS1-201ENST00000412640 DIEXFQ68CQ4 756 aaKnown RBP13.3□□□□□ -0.28
SOX9-AS1-201ENST00000412640 IP6K1Q92551 441 aa13.3□□□□□ -0.28
SOX9-AS1-201ENST00000412640 CCDC87Q9NVE4 849 aa13.3□□□□□ -0.28
SOX9-AS1-201ENST00000412640 PIM2Q9P1W9 311 aa13.3□□□□□ -0.28
SOX9-AS1-201ENST00000412640 USP31Q70CQ4 1352 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms