RNA–Protein interactions for RNA: ENST00000412587.5

PBRM1-209, Transcript of polybromo 1, humanhuman

TSL 1 (best)

Gene PBRM1, Length 4,766 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBRM1-209ENST00000412587 CDR1P51861 262 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 MPNDQ8N594 471 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 C14orf93Q9H972 538 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 KDM5BQ9UGL1 1544 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 FAM177BA6PVY3 158 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 FOXO3O43524 673 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 CT47B1P0C2W7 299 aaPredicted RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 TNPO1Q92973 898 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 SARNPP82979 210 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 TRDNQ13061 729 aa10.08□□□□□ -0.8
PBRM1-209ENST00000412587 RPRD2Q5VT52 1461 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 SECISBP2LQ93073 1101 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 CWC22Q9HCG8 908 aaKnown RBP10.08□□□□□ -0.8
PBRM1-209ENST00000412587 FAM135AQ9P2D6 1515 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 A0A1B0GUL7 405 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 MARCH6O60337 910 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 MNAT1P51948 309 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 K7ELQ4 463 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-209ENST00000412587 GOLIM4O00461 696 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 EIF3JO75822 258 aaKnown RBP10.07□□□□□ -0.8
PBRM1-209ENST00000412587 NFE2L2Q16236 605 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 NME9Q86XW9 330 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 NOB1Q9ULX3 412 aaKnown RBP10.07□□□□□ -0.8
PBRM1-209ENST00000412587 BCAR3O75815 825 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 FBXW7Q969H0 707 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 DDX11Q96FC9 970 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 PHF23Q9BUL5 403 aaPredicted RBP10.07□□□□□ -0.8
PBRM1-209ENST00000412587 KIAA0754O94854 1291 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 C10orf67Q8IYJ2 551 aa10.07□□□□□ -0.8
PBRM1-209ENST00000412587 IVLP07476 585 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 SPC24Q8NBT2 197 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 RSPH14Q9UHP6 348 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TEX14Q8IWB6 1497 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
PBRM1-209ENST00000412587 GNAI2P04899 355 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TMPOP42166 694 aaKnown RBP10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TNRQ92752 1358 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 UGGT2Q9NYU1 1516 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 WDR7Q9Y4E6 1490 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TPM1P09493 284 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TTLL5Q6EMB2 1281 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 TRIM5Q9C035 493 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 SYCE3A1L190 88 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 ZNF500O60304 480 aaPredicted RBP10.06□□□□□ -0.8
PBRM1-209ENST00000412587 RABEP1Q15276 862 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 PRDM4Q9UKN5 801 aa10.06□□□□□ -0.8
PBRM1-209ENST00000412587 CPLX1O14810 134 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 CCP110O43303 1012 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 CCT4P50991 539 aaKnown RBP10.05□□□□□ -0.8
PBRM1-209ENST00000412587 FOXD4L6Q3SYB3 417 aaPredicted RBP10.05□□□□□ -0.8
PBRM1-209ENST00000412587 FOXD4L3Q6VB84 417 aaPredicted RBP10.05□□□□□ -0.8
PBRM1-209ENST00000412587 CCDC191Q8NCU4 936 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 ANKRD20A12PQ8NF67 263 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 SRCIN1Q9C0H9 1055 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 PAXBP1Q9Y5B6 917 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 ADAMTS12P58397 1594 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 WASHC4Q2M389 1173 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 VPS53Q5VIR6 699 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 A2MP01023 1474 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 SCAF11Q99590 1463 aaKnown RBP10.05□□□□□ -0.8
PBRM1-209ENST00000412587 POLR3GO15318 223 aaPredicted RBP10.05□□□□□ -0.8
PBRM1-209ENST00000412587 ATF7IPQ6VMQ6 1270 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 FSD2A1L4K1 749 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 FILIP1Q7Z7B0 1213 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 C1orf115Q9H7X2 142 aa10.05□□□□□ -0.8
PBRM1-209ENST00000412587 PES1O00541 588 aaKnown RBP10.04□□□□□ -0.8
PBRM1-209ENST00000412587 ZNF526Q8TF50 670 aaPredicted RBP10.04□□□□□ -0.8
PBRM1-209ENST00000412587 BTBD11A6QL63 1104 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 CDC45O75419 566 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 U2AF2P26368 475 aaKnown RBP eCLIP10.04□□□□□ -0.8
PBRM1-209ENST00000412587 UBXN4Q92575 508 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 GNAT3A8MTJ3 354 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 RAD21O60216 631 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 ZNF428Q96B54 188 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 ZNF518AQ6AHZ1 1483 aa10.04□□□□□ -0.8
PBRM1-209ENST00000412587 CCDC70Q6NSX1 233 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 MYL6BP14649 208 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 PTPRKQ15262 1439 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 SKAP1Q86WV1 359 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 FSD1Q9BTV5 496 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 LIG1P18858 919 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 ZNF397Q8NF99 534 aaPredicted RBP10.03□□□□□ -0.8
PBRM1-209ENST00000412587 PDZRN3Q9UPQ7 1066 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 EMILIN1Q9Y6C2 1016 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 TRAPPC8Q9Y2L5 1435 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 TRIM29Q14134 588 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 UVSSAQ2YD98 709 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 C8orf34Q49A92 452 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 RALYLQ86SE5 291 aaKnown RBP10.03□□□□□ -0.8
PBRM1-209ENST00000412587 CNTROBQ8N137 903 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 GCC1Q96CN9 775 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 SYCP2Q9BX26 1530 aa10.03□□□□□ -0.8
PBRM1-209ENST00000412587 ERC1Q8IUD2 1116 aa10.02□□□□□ -0.8
PBRM1-209ENST00000412587 KIAA0556O60303 1618 aa10.02□□□□□ -0.8
PBRM1-209ENST00000412587 DUOX2Q9NRD8 1548 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 ERLIN1O75477 346 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 DHX8Q14562 1220 aaKnown RBP10.02□□□□□ -0.81
PBRM1-209ENST00000412587 DRC1Q96MC2 740 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 PPP1R9BQ96SB3 815 aa10.02□□□□□ -0.81
PBRM1-209ENST00000412587 THUMPD2Q9BTF0 503 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms