RNA–Protein interactions for RNA: ENST00000412274.6

DDR1-230, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 496 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-230ENST00000412274 NCAPD2Q15021 1401 aa22.06■■□□□ 1.12
DDR1-230ENST00000412274 MEGF6O75095 1541 aa22.05■■□□□ 1.12
DDR1-230ENST00000412274 NHSQ6T4R5 1651 aa22.04■■□□□ 1.12
DDR1-230ENST00000412274 RREB1Q92766 1687 aa22.04■■□□□ 1.12
DDR1-230ENST00000412274 USHBP1Q8N6Y0 703 aa22.03■■□□□ 1.12
DDR1-230ENST00000412274 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.03■■□□□ 1.12
DDR1-230ENST00000412274 PCDH11XQ9BZA7 1347 aa22.03■■□□□ 1.12
DDR1-230ENST00000412274 PCDH11YQ9BZA8 1340 aa22.03■■□□□ 1.12
DDR1-230ENST00000412274 EIF4A2Q14240 407 aaKnown RBP22.02■■□□□ 1.12
DDR1-230ENST00000412274 EYA1Q99502 592 aa22.02■■□□□ 1.12
DDR1-230ENST00000412274 SPG7Q9UQ90 795 aa22.01■■□□□ 1.11
DDR1-230ENST00000412274 ACSBG1Q96GR2 724 aa22■■□□□ 1.11
DDR1-230ENST00000412274 KCNQ2O43526 872 aa21.99■■□□□ 1.11
DDR1-230ENST00000412274 HMGB2P26583 209 aaKnown RBP21.98■■□□□ 1.11
DDR1-230ENST00000412274 IGSF1Q8N6C5 1336 aa21.98■■□□□ 1.11
DDR1-230ENST00000412274 PTF1AQ7RTS3 328 aa21.97■■□□□ 1.11
DDR1-230ENST00000412274 NUP188Q5SRE5 1749 aa21.97■■□□□ 1.11
DDR1-230ENST00000412274 SHANK3Q9BYB0 1731 aa21.97■■□□□ 1.11
DDR1-230ENST00000412274 CC2D1BQ5T0F9 858 aaKnown RBP21.96■■□□□ 1.11
DDR1-230ENST00000412274 PKD1L3Q7Z443 1732 aa21.95■■□□□ 1.1
DDR1-230ENST00000412274 R3HDM1Q15032 1099 aaKnown RBP21.95■■□□□ 1.1
DDR1-230ENST00000412274 TXNRD1Q16881 649 aa21.95■■□□□ 1.1
DDR1-230ENST00000412274 PRIM1P49642 420 aaKnown RBP21.93■■□□□ 1.1
DDR1-230ENST00000412274 MTHFSP49914 203 aa21.93■■□□□ 1.1
DDR1-230ENST00000412274 NKX1-1Q15270 411 aaPredicted RBP21.93■■□□□ 1.1
DDR1-230ENST00000412274 SLC27A3Q5K4L6 730 aa21.93■■□□□ 1.1
DDR1-230ENST00000412274 PROM2Q8N271 834 aa21.93■■□□□ 1.1
DDR1-230ENST00000412274 BTAF1O14981 1849 aa21.92■■□□□ 1.1
DDR1-230ENST00000412274 PSDA5PKW4 1024 aaPredicted RBP21.92■■□□□ 1.1
DDR1-230ENST00000412274 AMOTQ4VCS5 1084 aa21.92■■□□□ 1.1
DDR1-230ENST00000412274 SYTL4Q96C24 671 aaPredicted RBP21.92■■□□□ 1.1
DDR1-230ENST00000412274 CYP27B1O15528 508 aa21.91■■□□□ 1.1
DDR1-230ENST00000412274 IL13P35225 146 aa21.91■■□□□ 1.1
DDR1-230ENST00000412274 ZEB1P37275 1124 aaPredicted RBP21.91■■□□□ 1.1
DDR1-230ENST00000412274 IFNL2Q8IZJ0 200 aa21.91■■□□□ 1.1
DDR1-230ENST00000412274 KAT6BQ8WYB5 2073 aa21.91■■□□□ 1.1
DDR1-230ENST00000412274 DOT1LQ8TEK3 1739 aa21.9■■□□□ 1.1
DDR1-230ENST00000412274 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
DDR1-230ENST00000412274 HSP90AB1P08238 724 aaKnown RBP21.89■■□□□ 1.09
DDR1-230ENST00000412274 STK32BQ9NY57 414 aa21.88■■□□□ 1.09
DDR1-230ENST00000412274 KDRP35968 1356 aa21.87■■□□□ 1.09
DDR1-230ENST00000412274 DIAPH1O60610 1272 aaKnown RBP21.87■■□□□ 1.09
DDR1-230ENST00000412274 LRP5O75197 1615 aa21.87■■□□□ 1.09
DDR1-230ENST00000412274 PHKG2P15735 406 aa21.86■■□□□ 1.09
DDR1-230ENST00000412274 SULT6B1Q6IMI4 303 aa21.85■■□□□ 1.09
DDR1-230ENST00000412274 SMARCC1Q92922 1105 aaPredicted RBP21.85■■□□□ 1.09
DDR1-230ENST00000412274 SLC15A2Q16348 729 aa21.84■■□□□ 1.09
DDR1-230ENST00000412274 CFAP53Q96M91 514 aa21.84■■□□□ 1.09
DDR1-230ENST00000412274 MPRIPQ6WCQ1 1025 aa21.82■■□□□ 1.08
DDR1-230ENST00000412274 DCAF5Q96JK2 942 aa21.82■■□□□ 1.08
DDR1-230ENST00000412274 ERVV-2B6SEH9 535 aa21.81■■□□□ 1.08
DDR1-230ENST00000412274 C1orf141Q5JVX7 400 aa21.81■■□□□ 1.08
DDR1-230ENST00000412274 ANO8Q9HCE9 1232 aaPredicted RBP21.81■■□□□ 1.08
DDR1-230ENST00000412274 LY75O60449 1722 aa21.8■■□□□ 1.08
DDR1-230ENST00000412274 TMOD3Q9NYL9 352 aa21.8■■□□□ 1.08
DDR1-230ENST00000412274 ZNF530Q6P9A1 599 aaPredicted RBP21.79■■□□□ 1.08
DDR1-230ENST00000412274 AEBP1Q8IUX7 1158 aa21.79■■□□□ 1.08
DDR1-230ENST00000412274 LRRC4BQ9NT99 713 aa21.79■■□□□ 1.08
DDR1-230ENST00000412274 CCNL1Q9UK58 526 aaPredicted RBP21.79■■□□□ 1.08
DDR1-230ENST00000412274 PAPPAQ13219 1627 aa21.78■■□□□ 1.08
DDR1-230ENST00000412274 CNGB1Q14028 1251 aaPredicted RBP21.78■■□□□ 1.08
DDR1-230ENST00000412274 PIGBQ92521 554 aa21.78■■□□□ 1.08
DDR1-230ENST00000412274 SPON1Q9HCB6 807 aa21.78■■□□□ 1.08
DDR1-230ENST00000412274 NUDCQ9Y266 331 aa21.78■■□□□ 1.08
DDR1-230ENST00000412274 ITGB4P16144 1822 aa21.77■■□□□ 1.08
DDR1-230ENST00000412274 TOGARAM1Q9Y4F4 1720 aa21.77■■□□□ 1.08
DDR1-230ENST00000412274 PALLDQ8WX93 1383 aa21.76■■□□□ 1.07
DDR1-230ENST00000412274 PPP2R1AP30153 589 aa21.76■■□□□ 1.07
DDR1-230ENST00000412274 COL3A1P02461 1466 aaPredicted RBP21.76■■□□□ 1.07
DDR1-230ENST00000412274 AKAP4Q5JQC9 854 aa21.75■■□□□ 1.07
DDR1-230ENST00000412274 AKT1S1Q96B36 256 aa21.75■■□□□ 1.07
DDR1-230ENST00000412274 SRCAPQ6ZRS2 3230 aa21.74■■□□□ 1.07
DDR1-230ENST00000412274 U2SURPO15042 1029 aaKnown RBP21.73■■□□□ 1.07
DDR1-230ENST00000412274 HMOX1P09601 288 aa21.73■■□□□ 1.07
DDR1-230ENST00000412274 SLC16A10Q8TF71 515 aa21.73■■□□□ 1.07
DDR1-230ENST00000412274 CASZ1Q86V15 1759 aa21.73■■□□□ 1.07
DDR1-230ENST00000412274 CABP4P57796 275 aa21.72■■□□□ 1.07
DDR1-230ENST00000412274 QSER1Q2KHR3 1735 aa21.72■■□□□ 1.07
DDR1-230ENST00000412274 RALBP1Q15311 655 aa21.71■■□□□ 1.07
DDR1-230ENST00000412274 MTFR1LQ9H019 292 aa21.71■■□□□ 1.07
DDR1-230ENST00000412274 TFCP2L1Q9NZI6 479 aa21.71■■□□□ 1.07
DDR1-230ENST00000412274 ZNF827Q17R98 1081 aa21.7■■□□□ 1.06
DDR1-230ENST00000412274 FLAD1Q8NFF5 587 aa21.7■■□□□ 1.06
DDR1-230ENST00000412274 LOC102724428A0A0B4J2F2 783 aa21.68■■□□□ 1.06
DDR1-230ENST00000412274 SIK1P57059 783 aa21.68■■□□□ 1.06
DDR1-230ENST00000412274 GAS2L2Q8NHY3 880 aa21.68■■□□□ 1.06
DDR1-230ENST00000412274 PPP1R1BQ9UD71 204 aaPredicted RBP21.68■■□□□ 1.06
DDR1-230ENST00000412274 KDM6AO15550 1401 aaPredicted RBP21.68■■□□□ 1.06
DDR1-230ENST00000412274 DDX10Q13206 875 aaKnown RBP21.67■■□□□ 1.06
DDR1-230ENST00000412274 ATG3Q9NT62 314 aa21.67■■□□□ 1.06
DDR1-230ENST00000412274 ASAP1Q9ULH1 1129 aa21.67■■□□□ 1.06
DDR1-230ENST00000412274 C5P01031 1676 aa21.66■■□□□ 1.06
DDR1-230ENST00000412274 FCHSD2O94868 740 aa21.66■■□□□ 1.06
DDR1-230ENST00000412274 MTHFSDQ2M296 383 aaKnown RBP21.66■■□□□ 1.06
DDR1-230ENST00000412274 KCNQ4P56696 695 aa21.65■■□□□ 1.06
DDR1-230ENST00000412274 ZNF831Q5JPB2 1677 aa21.65■■□□□ 1.06
DDR1-230ENST00000412274 ZBTB7AO95365 584 aa21.64■■□□□ 1.05
DDR1-230ENST00000412274 NFATC2IPQ8NCF5 419 aa21.64■■□□□ 1.05
DDR1-230ENST00000412274 SCN11AQ9UI33 1791 aa21.64■■□□□ 1.05
DDR1-230ENST00000412274 PNPLA7Q6ZV29 1317 aa21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms