RNA–Protein interactions for RNA: ENST00000412167.6

KIT-202, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene KIT, Length 3,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-202ENST00000412167 MEX3CQ5U5Q3 659 aaKnown RBP13.17□□□□□ -0.3
KIT-202ENST00000412167 GNAI1P63096 354 aa13.16□□□□□ -0.3
KIT-202ENST00000412167 SMIM5Q71RC9 77 aa13.16□□□□□ -0.3
KIT-202ENST00000412167 RBM42Q9BTD8 480 aaKnown RBP13.16□□□□□ -0.3
KIT-202ENST00000412167 NEURL4Q96JN8 1562 aa13.16□□□□□ -0.3
KIT-202ENST00000412167 ZKSCAN2Q63HK3 967 aa13.16□□□□□ -0.3
KIT-202ENST00000412167 DZIP1LQ8IYY4 767 aaKnown RBP13.16□□□□□ -0.3
KIT-202ENST00000412167 IGHDP01880 384 aa13.15□□□□□ -0.3
KIT-202ENST00000412167 TATP17735 454 aaPredicted RBP13.15□□□□□ -0.3
KIT-202ENST00000412167 SBNO1A3KN83 1393 aa13.15□□□□□ -0.3
KIT-202ENST00000412167 WDR63Q8IWG1 891 aa13.15□□□□□ -0.3
KIT-202ENST00000412167 PHAXQ9H814 394 aaKnown RBP13.15□□□□□ -0.3
KIT-202ENST00000412167 SETD1AO15047 1707 aaKnown RBP13.15□□□□□ -0.3
KIT-202ENST00000412167 CDC42BPGQ6DT37 1551 aa13.15□□□□□ -0.3
KIT-202ENST00000412167 CCDC85AQ96PX6 553 aaPredicted RBP13.14□□□□□ -0.31
KIT-202ENST00000412167 PLEKHO1Q53GL0 409 aaPredicted RBP13.14□□□□□ -0.31
KIT-202ENST00000412167 HDGFL1Q5TGJ6 251 aa13.14□□□□□ -0.31
KIT-202ENST00000412167 GAS2L2Q8NHY3 880 aa13.14□□□□□ -0.31
KIT-202ENST00000412167 VAMP4O75379 141 aa13.13□□□□□ -0.31
KIT-202ENST00000412167 PCDHB15Q9Y5E8 787 aa13.13□□□□□ -0.31
KIT-202ENST00000412167 LRRC7Q96NW7 1537 aa13.13□□□□□ -0.31
KIT-202ENST00000412167 PIK3R4Q99570 1358 aa13.13□□□□□ -0.31
KIT-202ENST00000412167 OVOS2A0A0J9YW53 1432 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 OVOS2Q6IE36 1432 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 STK31Q9BXU1 1019 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 SPATA31A3Q5VYP0 1347 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 CFAP44Q96MT7 982 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 LMOD3Q0VAK6 560 aa13.12□□□□□ -0.31
KIT-202ENST00000412167 FAM98CQ17RN3 349 aaKnown RBP13.11□□□□□ -0.31
KIT-202ENST00000412167 ERBB3P21860 1342 aa13.11□□□□□ -0.31
KIT-202ENST00000412167 MST1RQ04912 1400 aa13.11□□□□□ -0.31
KIT-202ENST00000412167 NALCNQ8IZF0 1738 aa13.11□□□□□ -0.31
KIT-202ENST00000412167 CABP4P57796 275 aa13.11□□□□□ -0.31
KIT-202ENST00000412167 LNPKQ9C0E8 428 aa13.11□□□□□ -0.31
KIT-202ENST00000412167 TOM1O60784 492 aa13.1□□□□□ -0.31
KIT-202ENST00000412167 ATF7IPQ6VMQ6 1270 aa13.1□□□□□ -0.31
KIT-202ENST00000412167 CHPF2Q9P2E5 772 aa13.1□□□□□ -0.31
KIT-202ENST00000412167 USP32Q8NFA0 1604 aa13.1□□□□□ -0.31
KIT-202ENST00000412167 PROSER3Q2NL68 480 aa13.09□□□□□ -0.31
KIT-202ENST00000412167 TTC5Q8N0Z6 440 aa13.09□□□□□ -0.31
KIT-202ENST00000412167 PNPLA6Q8IY17 1366 aa13.09□□□□□ -0.31
KIT-202ENST00000412167 IGSF1Q8N6C5 1336 aa13.08□□□□□ -0.31
KIT-202ENST00000412167 TAF7Q15545 349 aaPredicted RBP13.08□□□□□ -0.31
KIT-202ENST00000412167 TSHZ3Q63HK5 1081 aa13.08□□□□□ -0.31
KIT-202ENST00000412167 RBM19Q9Y4C8 960 aaKnown RBP13.08□□□□□ -0.31
KIT-202ENST00000412167 CHMP3Q9Y3E7 222 aa13.08□□□□□ -0.32
KIT-202ENST00000412167 ATP5J2-PTCD1G3V325 749 aa13.08□□□□□ -0.32
KIT-202ENST00000412167 CYP27B1O15528 508 aa13.07□□□□□ -0.32
KIT-202ENST00000412167 SLC4A3P48751 1232 aa13.07□□□□□ -0.32
KIT-202ENST00000412167 IFT57Q9NWB7 429 aa13.07□□□□□ -0.32
KIT-202ENST00000412167 INSRP06213 1382 aa13.07□□□□□ -0.32
KIT-202ENST00000412167 CALD1Q05682 793 aaKnown RBP13.07□□□□□ -0.32
KIT-202ENST00000412167 SMARCA5O60264 1052 aaPredicted RBP13.07□□□□□ -0.32
KIT-202ENST00000412167 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
KIT-202ENST00000412167 MEIS3Q99687 375 aa13.06□□□□□ -0.32
KIT-202ENST00000412167 ANKRD45Q5TZF3 282 aa13.06□□□□□ -0.32
KIT-202ENST00000412167 ITSN1Q15811 1721 aa13.06□□□□□ -0.32
KIT-202ENST00000412167 USP16Q9Y5T5 823 aa13.05□□□□□ -0.32
KIT-202ENST00000412167 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
KIT-202ENST00000412167 ZCRB1Q8TBF4 217 aaKnown RBP13.05□□□□□ -0.32
KIT-202ENST00000412167 ZNF496Q96IT1 587 aaPredicted RBP13.05□□□□□ -0.32
KIT-202ENST00000412167 IPO8O15397 1037 aaKnown RBP13.05□□□□□ -0.32
KIT-202ENST00000412167 RNMTO43148 476 aaKnown RBP13.05□□□□□ -0.32
KIT-202ENST00000412167 HSPA1LP34931 641 aa13.05□□□□□ -0.32
KIT-202ENST00000412167 ZBTB3Q9H5J0 574 aa13.05□□□□□ -0.32
KIT-202ENST00000412167 COL3A1P02461 1466 aaPredicted RBP13.04□□□□□ -0.32
KIT-202ENST00000412167 CWF19L2Q2TBE0 894 aaKnown RBP13.04□□□□□ -0.32
KIT-202ENST00000412167 CHD2O14647 1828 aaKnown RBP13.04□□□□□ -0.32
KIT-202ENST00000412167 PI4KAP2A4QPH2 592 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 PI4KAP1Q8N8J0 262 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 SSH2Q76I76 1423 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 A1BGP04217 495 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 MVPQ14764 893 aaKnown RBP13.04□□□□□ -0.32
KIT-202ENST00000412167 SPRYD3Q8NCJ5 442 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 ZBTB47Q9UFB7 747 aaPredicted RBP13.04□□□□□ -0.32
KIT-202ENST00000412167 ASAP1Q9ULH1 1129 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 SPG7Q9UQ90 795 aa13.04□□□□□ -0.32
KIT-202ENST00000412167 USP31Q70CQ4 1352 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 CHL1O00533 1208 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 MRPL50Q8N5N7 158 aaKnown RBP13.03□□□□□ -0.32
KIT-202ENST00000412167 CDK12Q9NYV4 1490 aaPredicted RBP13.03□□□□□ -0.32
KIT-202ENST00000412167 MAP3K5Q99683 1374 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 EXOC6BQ9Y2D4 811 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 PRIM1P49642 420 aaKnown RBP13.03□□□□□ -0.32
KIT-202ENST00000412167 PTF1AQ7RTS3 328 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 CCDC24Q8N4L8 307 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 SIL1Q9H173 461 aa13.03□□□□□ -0.32
KIT-202ENST00000412167 STRCP1A6NGW2 1772 aa13.02□□□□□ -0.32
KIT-202ENST00000412167 IL2RBP14784 551 aa13.02□□□□□ -0.32
KIT-202ENST00000412167 CCDC27Q2M243 656 aa13.02□□□□□ -0.32
KIT-202ENST00000412167 IFNL2Q8IZJ0 200 aa13.02□□□□□ -0.32
KIT-202ENST00000412167 KIF20BQ96Q89 1820 aa13.02□□□□□ -0.33
KIT-202ENST00000412167 KCNQ2O43526 872 aa13.02□□□□□ -0.33
KIT-202ENST00000412167 FLIIQ13045 1269 aa13.02□□□□□ -0.33
KIT-202ENST00000412167 PIK3C2AO00443 1686 aa13.01□□□□□ -0.33
KIT-202ENST00000412167 XRN1Q8IZH2 1706 aaKnown RBP13.01□□□□□ -0.33
KIT-202ENST00000412167 GPTP24298 496 aa13.01□□□□□ -0.33
KIT-202ENST00000412167 RIC3Q7Z5B4 369 aa13.01□□□□□ -0.33
KIT-202ENST00000412167 C16orf71Q8IYS4 520 aaPredicted RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms