RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 LMO7Q8WWI1 1683 aa24.88■■□□□ 1.57
LMO2-203ENST00000411482 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.87■■□□□ 1.57
LMO2-203ENST00000411482 NRAPQ86VF7 1730 aa24.87■■□□□ 1.57
LMO2-203ENST00000411482 ZNF853P0CG23 659 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 LMOD3Q0VAK6 560 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 UNC5CLQ8IV45 518 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 TSR2Q969E8 191 aaKnown RBP24.86■■□□□ 1.57
LMO2-203ENST00000411482 BTG4Q9NY30 223 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 CAMTA1Q9Y6Y1 1673 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 EXOSC9Q06265 439 aaKnown RBP24.86■■□□□ 1.57
LMO2-203ENST00000411482 HSP90AB2PQ58FF8 381 aa24.86■■□□□ 1.57
LMO2-203ENST00000411482 QTRT2Q9H974 415 aaKnown RBP24.86■■□□□ 1.57
LMO2-203ENST00000411482 ZNF428Q96B54 188 aa24.85■■□□□ 1.57
LMO2-203ENST00000411482 RGPD5Q99666 1765 aa24.84■■□□□ 1.57
LMO2-203ENST00000411482 AXIN2Q9Y2T1 843 aa24.84■■□□□ 1.57
LMO2-203ENST00000411482 LTN1O94822 1766 aa24.84■■□□□ 1.57
LMO2-203ENST00000411482 ATRNO75882 1429 aa24.84■■□□□ 1.57
LMO2-203ENST00000411482 IFT57Q9NWB7 429 aa24.83■■□□□ 1.57
LMO2-203ENST00000411482 KDRP35968 1356 aa24.82■■□□□ 1.56
LMO2-203ENST00000411482 CENPQQ7L2Z9 268 aaPredicted RBP24.82■■□□□ 1.56
LMO2-203ENST00000411482 TCERG1O14776 1098 aaKnown RBP24.81■■□□□ 1.56
LMO2-203ENST00000411482 DLG5Q8TDM6 1919 aa24.81■■□□□ 1.56
LMO2-203ENST00000411482 BRPF1P55201 1214 aaPredicted RBP24.81■■□□□ 1.56
LMO2-203ENST00000411482 GNAI1P63096 354 aa24.81■■□□□ 1.56
LMO2-203ENST00000411482 SULT6B1Q6IMI4 303 aa24.81■■□□□ 1.56
LMO2-203ENST00000411482 TRPC5Q9UL62 973 aaPredicted RBP24.81■■□□□ 1.56
LMO2-203ENST00000411482 ZBTB7CA1YPR0 619 aa24.79■■□□□ 1.56
LMO2-203ENST00000411482 ALDH1L2Q3SY69 923 aa24.79■■□□□ 1.56
LMO2-203ENST00000411482 ILDR2Q71H61 639 aa24.79■■□□□ 1.56
LMO2-203ENST00000411482 AEBP1Q8IUX7 1158 aa24.79■■□□□ 1.56
LMO2-203ENST00000411482 MS4A1P11836 297 aa24.78■■□□□ 1.56
LMO2-203ENST00000411482 VPS72Q15906 364 aa24.78■■□□□ 1.56
LMO2-203ENST00000411482 IGSF1Q8N6C5 1336 aa24.78■■□□□ 1.56
LMO2-203ENST00000411482 CANXP27824 592 aaKnown RBP24.77■■□□□ 1.56
LMO2-203ENST00000411482 PANK1Q8TE04 598 aa24.77■■□□□ 1.56
LMO2-203ENST00000411482 CFAP44Q96MT7 982 aa24.77■■□□□ 1.56
LMO2-203ENST00000411482 RTL1A6NKG5 1358 aa24.77■■□□□ 1.56
LMO2-203ENST00000411482 ZKSCAN2Q63HK3 967 aa24.76■■□□□ 1.55
LMO2-203ENST00000411482 SSH1Q8WYL5 1049 aa24.76■■□□□ 1.55
LMO2-203ENST00000411482 COL5A2P05997 1499 aaPredicted RBP24.76■■□□□ 1.55
LMO2-203ENST00000411482 AMPHP49418 695 aa24.76■■□□□ 1.55
LMO2-203ENST00000411482 FRAT1Q92837 279 aaPredicted RBP24.76■■□□□ 1.55
LMO2-203ENST00000411482 GJD4Q96KN9 370 aaPredicted RBP24.76■■□□□ 1.55
LMO2-203ENST00000411482 ABCC6O95255 1503 aa24.75■■□□□ 1.55
LMO2-203ENST00000411482 RBM6P78332 1123 aaKnown RBP24.75■■□□□ 1.55
LMO2-203ENST00000411482 GLI3P10071 1580 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 RLBP1P12271 317 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 RXRBP28702 533 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 HOXC9P31274 260 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 CLUAP1Q96AJ1 413 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 COG6Q9Y2V7 657 aa24.74■■□□□ 1.55
LMO2-203ENST00000411482 IP6K1Q92551 441 aa24.73■■□□□ 1.55
LMO2-203ENST00000411482 STRN4Q9NRL3 753 aa24.73■■□□□ 1.55
LMO2-203ENST00000411482 LARP1Q6PKG0 1096 aaKnown RBP24.72■■□□□ 1.55
LMO2-203ENST00000411482 EYA1Q99502 592 aa24.72■■□□□ 1.55
LMO2-203ENST00000411482 BCL2L13Q9BXK5 485 aa24.72■■□□□ 1.55
LMO2-203ENST00000411482 SMC4Q9NTJ3 1288 aa24.72■■□□□ 1.55
LMO2-203ENST00000411482 SPATA31A5Q5VU36 1347 aa24.71■■□□□ 1.55
LMO2-203ENST00000411482 SPATA31A7Q8IWB4 1347 aa24.71■■□□□ 1.55
LMO2-203ENST00000411482 VAMP4O75379 141 aa24.71■■□□□ 1.55
LMO2-203ENST00000411482 EVA1CP58658 441 aa24.71■■□□□ 1.55
LMO2-203ENST00000411482 THUMPD2Q9BTF0 503 aaKnown RBP24.71■■□□□ 1.55
LMO2-203ENST00000411482 MBIPQ9NS73 344 aa24.71■■□□□ 1.55
LMO2-203ENST00000411482 KIF16BQ96L93 1317 aa24.7■■□□□ 1.54
LMO2-203ENST00000411482 DZIP1LQ8IYY4 767 aaKnown RBP24.7■■□□□ 1.54
LMO2-203ENST00000411482 MVPQ14764 893 aaKnown RBP24.69■■□□□ 1.54
LMO2-203ENST00000411482 ATF7IPQ6VMQ6 1270 aa24.69■■□□□ 1.54
LMO2-203ENST00000411482 TNNQ9UQP3 1299 aa24.69■■□□□ 1.54
LMO2-203ENST00000411482 SPATA31A1Q5TZJ5 1347 aa24.68■■□□□ 1.54
LMO2-203ENST00000411482 IPO8O15397 1037 aaKnown RBP24.68■■□□□ 1.54
LMO2-203ENST00000411482 WDR17Q8IZU2 1322 aa24.67■■□□□ 1.54
LMO2-203ENST00000411482 CHL1O00533 1208 aa24.67■■□□□ 1.54
LMO2-203ENST00000411482 ONECUT3O60422 494 aaPredicted RBP24.67■■□□□ 1.54
LMO2-203ENST00000411482 ERBB3P21860 1342 aa24.67■■□□□ 1.54
LMO2-203ENST00000411482 HTATSF1O43719 755 aaKnown RBP24.66■■□□□ 1.54
LMO2-203ENST00000411482 TRIM27P14373 513 aa24.66■■□□□ 1.54
LMO2-203ENST00000411482 ARHGAP45Q92619 1136 aa24.66■■□□□ 1.54
LMO2-203ENST00000411482 CCDC9Q9Y3X0 531 aaKnown RBP24.66■■□□□ 1.54
LMO2-203ENST00000411482 CRB1P82279 1406 aa24.65■■□□□ 1.54
LMO2-203ENST00000411482 NOB1Q9ULX3 412 aaKnown RBP24.65■■□□□ 1.54
LMO2-203ENST00000411482 GAS2L2Q8NHY3 880 aa24.64■■□□□ 1.53
LMO2-203ENST00000411482 ANKRD24Q8TF21 1146 aa24.64■■□□□ 1.53
LMO2-203ENST00000411482 LAS1LQ9Y4W2 734 aaKnown RBP24.64■■□□□ 1.53
LMO2-203ENST00000411482 RGS12O14924 1447 aa24.63■■□□□ 1.53
LMO2-203ENST00000411482 IGHDP01880 384 aa24.63■■□□□ 1.53
LMO2-203ENST00000411482 MTHFSDQ2M296 383 aaKnown RBP24.63■■□□□ 1.53
LMO2-203ENST00000411482 MRPL50Q8N5N7 158 aaKnown RBP24.63■■□□□ 1.53
LMO2-203ENST00000411482 RGPD2P0DJD1 1756 aa24.62■■□□□ 1.53
LMO2-203ENST00000411482 TSPYL6Q8N831 410 aa24.62■■□□□ 1.53
LMO2-203ENST00000411482 DCTN1Q14203 1278 aa24.61■■□□□ 1.53
LMO2-203ENST00000411482 USP35Q9P2H5 1018 aa24.61■■□□□ 1.53
LMO2-203ENST00000411482 FAM98CQ17RN3 349 aaKnown RBP24.61■■□□□ 1.53
LMO2-203ENST00000411482 TOM1L2Q6ZVM7 507 aa24.61■■□□□ 1.53
LMO2-203ENST00000411482 FTSJ3Q8IY81 847 aaKnown RBP24.61■■□□□ 1.53
LMO2-203ENST00000411482 CARD10Q9BWT7 1032 aa24.61■■□□□ 1.53
LMO2-203ENST00000411482 DDX19BQ9UMR2 479 aa24.61■■□□□ 1.53
LMO2-203ENST00000411482 TWISTNBQ3B726 338 aaPredicted RBP24.6■■□□□ 1.53
LMO2-203ENST00000411482 C8orf58Q8NAV2 365 aa24.6■■□□□ 1.53
LMO2-203ENST00000411482 LTV1Q96GA3 475 aaPredicted RBP24.6■■□□□ 1.53
LMO2-203ENST00000411482 PCDHB15Q9Y5E8 787 aa24.6■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms