RNA–Protein interactions for RNA: ENST00000411341.1

RN7SKP172-201, Transcript of RNA, 7SK small nuclear pseudogene 172, humanhuman

BASIC

Gene RN7SKP172, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP172-201ENST00000411341 MTFR1LQ9H019 292 aa13.92□□□□□ -0.18
RN7SKP172-201ENST00000411341 TFCP2L1Q9NZI6 479 aa13.92□□□□□ -0.18
RN7SKP172-201ENST00000411341 PCDH11XQ9BZA7 1347 aa13.91□□□□□ -0.18
RN7SKP172-201ENST00000411341 PCDH11YQ9BZA8 1340 aa13.91□□□□□ -0.18
RN7SKP172-201ENST00000411341 RGPD3A6NKT7 1758 aaPredicted RBP13.91□□□□□ -0.18
RN7SKP172-201ENST00000411341 RGPD4Q7Z3J3 1758 aa13.91□□□□□ -0.18
RN7SKP172-201ENST00000411341 MSH5O43196 834 aa13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 HSPA5P11021 654 aaKnown RBP13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 POLD1P28340 1107 aa13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 TNNT2P45379 298 aaPredicted RBP13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 SPG7Q9UQ90 795 aa13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 EMILIN1Q9Y6C2 1016 aa13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 FAM208AQ9UK61 1670 aaKnown RBP13.9□□□□□ -0.18
RN7SKP172-201ENST00000411341 CCNL1Q9UK58 526 aaPredicted RBP13.89□□□□□ -0.19
RN7SKP172-201ENST00000411341 SBF2Q86WG5 1849 aa13.89□□□□□ -0.19
RN7SKP172-201ENST00000411341 NHSQ6T4R5 1651 aa13.88□□□□□ -0.19
RN7SKP172-201ENST00000411341 SLC16A10Q8TF71 515 aa13.88□□□□□ -0.19
RN7SKP172-201ENST00000411341 PDGFDQ9GZP0 370 aaPredicted RBP13.88□□□□□ -0.19
RN7SKP172-201ENST00000411341 MPRIPQ6WCQ1 1025 aa13.87□□□□□ -0.19
RN7SKP172-201ENST00000411341 KLHL34Q8N239 644 aa13.87□□□□□ -0.19
RN7SKP172-201ENST00000411341 PANK3Q9H999 370 aa13.87□□□□□ -0.19
RN7SKP172-201ENST00000411341 KNSTRNQ9Y448 316 aa13.87□□□□□ -0.19
RN7SKP172-201ENST00000411341 WASHC2AQ641Q2 1341 aa13.87□□□□□ -0.19
RN7SKP172-201ENST00000411341 MEGF6O75095 1541 aa13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 YY1P25490 414 aa13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 MORC1Q86VD1 984 aa13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 SMARCC1Q92922 1105 aaPredicted RBP13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 ARXQ96QS3 562 aa13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 LRRC4BQ9NT99 713 aa13.86□□□□□ -0.19
RN7SKP172-201ENST00000411341 ZNF827Q17R98 1081 aa13.85□□□□□ -0.19
RN7SKP172-201ENST00000411341 PTGER2P43116 358 aa13.84□□□□□ -0.19
RN7SKP172-201ENST00000411341 FHDC1Q9C0D6 1143 aaPredicted RBP13.84□□□□□ -0.19
RN7SKP172-201ENST00000411341 POLKQ9UBT6 870 aa13.84□□□□□ -0.19
RN7SKP172-201ENST00000411341 KCNQ4P56696 695 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 IFNL2Q8IZJ0 200 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 FLAD1Q8NFF5 587 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 AKT1S1Q96B36 256 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 EYA1Q99502 592 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 SYT17Q9BSW7 474 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 KIF20BQ96Q89 1820 aa13.83□□□□□ -0.2
RN7SKP172-201ENST00000411341 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.82□□□□□ -0.2
RN7SKP172-201ENST00000411341 TMOD3Q9NYL9 352 aa13.82□□□□□ -0.2
RN7SKP172-201ENST00000411341 NSD2O96028 1365 aa13.82□□□□□ -0.2
RN7SKP172-201ENST00000411341 CYP27B1O15528 508 aa13.81□□□□□ -0.2
RN7SKP172-201ENST00000411341 SRCAPQ6ZRS2 3230 aa13.81□□□□□ -0.2
RN7SKP172-201ENST00000411341 HSP90AB1P08238 724 aaKnown RBP13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 EIF4A2Q14240 407 aaKnown RBP13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 PLEKHO1Q53GL0 409 aaPredicted RBP13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 AK7Q96M32 723 aa13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 BTAF1O14981 1849 aa13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 PALLDQ8WX93 1383 aa13.8□□□□□ -0.2
RN7SKP172-201ENST00000411341 GPR162Q16538 588 aa13.79□□□□□ -0.2
RN7SKP172-201ENST00000411341 PELP1Q8IZL8 1130 aaKnown RBP13.79□□□□□ -0.2
RN7SKP172-201ENST00000411341 PNPLA7Q6ZV29 1317 aa13.79□□□□□ -0.2
RN7SKP172-201ENST00000411341 NKX1-1Q15270 411 aaPredicted RBP13.78□□□□□ -0.2
RN7SKP172-201ENST00000411341 AMOTQ4VCS5 1084 aa13.78□□□□□ -0.2
RN7SKP172-201ENST00000411341 CASZ1Q86V15 1759 aa13.78□□□□□ -0.2
RN7SKP172-201ENST00000411341 KAT6BQ8WYB5 2073 aa13.78□□□□□ -0.2
RN7SKP172-201ENST00000411341 PHKG2P15735 406 aa13.77□□□□□ -0.21
RN7SKP172-201ENST00000411341 MYOM1P52179 1685 aa13.77□□□□□ -0.21
RN7SKP172-201ENST00000411341 C1orf141Q5JVX7 400 aa13.77□□□□□ -0.21
RN7SKP172-201ENST00000411341 SGIP1Q9BQI5 828 aa13.77□□□□□ -0.21
RN7SKP172-201ENST00000411341 PIGBQ92521 554 aa13.76□□□□□ -0.21
RN7SKP172-201ENST00000411341 DOT1LQ8TEK3 1739 aa13.76□□□□□ -0.21
RN7SKP172-201ENST00000411341 ATP6V1AP38606 617 aa13.75□□□□□ -0.21
RN7SKP172-201ENST00000411341 CABP4P57796 275 aa13.75□□□□□ -0.21
RN7SKP172-201ENST00000411341 COL23A1Q86Y22 540 aaPredicted RBP13.75□□□□□ -0.21
RN7SKP172-201ENST00000411341 RGPD2P0DJD1 1756 aa13.75□□□□□ -0.21
RN7SKP172-201ENST00000411341 ERVV-2B6SEH9 535 aa13.74□□□□□ -0.21
RN7SKP172-201ENST00000411341 PHF14O94880 888 aa13.74□□□□□ -0.21
RN7SKP172-201ENST00000411341 ZNF530Q6P9A1 599 aaPredicted RBP13.74□□□□□ -0.21
RN7SKP172-201ENST00000411341 DCAF5Q96JK2 942 aa13.74□□□□□ -0.21
RN7SKP172-201ENST00000411341 PLEKHG2Q9H7P9 1386 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 PAPPAQ13219 1627 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 LOC102724428A0A0B4J2F2 783 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 MTHFSP49914 203 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 SIK1P57059 783 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 MSL1Q68DK7 614 aa13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 RBM42Q9BTD8 480 aaKnown RBP13.73□□□□□ -0.21
RN7SKP172-201ENST00000411341 MAP3K5Q99683 1374 aa13.72□□□□□ -0.21
RN7SKP172-201ENST00000411341 IGSF1Q8N6C5 1336 aa13.72□□□□□ -0.21
RN7SKP172-201ENST00000411341 SULT6B1Q6IMI4 303 aa13.72□□□□□ -0.21
RN7SKP172-201ENST00000411341 KIF7Q2M1P5 1343 aa13.71□□□□□ -0.21
RN7SKP172-201ENST00000411341 GRIN3BO60391 1043 aa13.71□□□□□ -0.21
RN7SKP172-201ENST00000411341 CNGB1Q14028 1251 aaPredicted RBP13.71□□□□□ -0.21
RN7SKP172-201ENST00000411341 ASAP1Q9ULH1 1129 aa13.71□□□□□ -0.21
RN7SKP172-201ENST00000411341 NCAPD2Q15021 1401 aa13.71□□□□□ -0.22
RN7SKP172-201ENST00000411341 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.7□□□□□ -0.22
RN7SKP172-201ENST00000411341 GNPATO15228 680 aa13.7□□□□□ -0.22
RN7SKP172-201ENST00000411341 SSFA2P28290 1259 aa13.7□□□□□ -0.22
RN7SKP172-201ENST00000411341 CC2D1BQ5T0F9 858 aaKnown RBP13.7□□□□□ -0.22
RN7SKP172-201ENST00000411341 TRAPPC3LQ5T215 181 aa13.69□□□□□ -0.22
RN7SKP172-201ENST00000411341 ATG3Q9NT62 314 aa13.69□□□□□ -0.22
RN7SKP172-201ENST00000411341 RTCBQ9Y3I0 505 aaKnown RBP13.69□□□□□ -0.22
RN7SKP172-201ENST00000411341 CD2APQ9Y5K6 639 aa13.69□□□□□ -0.22
RN7SKP172-201ENST00000411341 LY75O60449 1722 aa13.68□□□□□ -0.22
RN7SKP172-201ENST00000411341 SHANK3Q9BYB0 1731 aa13.68□□□□□ -0.22
RN7SKP172-201ENST00000411341 DIAPH1O60610 1272 aaKnown RBP13.68□□□□□ -0.22
RN7SKP172-201ENST00000411341 MAP2P11137 1827 aaKnown RBP13.68□□□□□ -0.22
RN7SKP172-201ENST00000411341 AMER1Q5JTC6 1135 aaPredicted RBP13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms