RNA–Protein interactions for RNA: ENST00000410773.1

RN7SKP39-201, Transcript of RNA, 7SK small nuclear pseudogene 39, humanhuman

BASIC

Gene RN7SKP39, Length 322 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP39-201ENST00000410773 NMRK2Q9NPI5 230 aa11.43□□□□□ -0.58
RN7SKP39-201ENST00000410773 NLRP2Q9NX02 1062 aa11.43□□□□□ -0.58
RN7SKP39-201ENST00000410773 CABP1Q9NZU7 370 aa11.43□□□□□ -0.58
RN7SKP39-201ENST00000410773 TAF1LQ8IZX4 1826 aa11.42□□□□□ -0.58
RN7SKP39-201ENST00000410773 RBM46Q8TBY0 533 aaKnown RBP11.42□□□□□ -0.58
RN7SKP39-201ENST00000410773 CCNL1Q9UK58 526 aaPredicted RBP11.42□□□□□ -0.58
RN7SKP39-201ENST00000410773 KIAA1210Q9ULL0 1709 aa11.42□□□□□ -0.58
RN7SKP39-201ENST00000410773 ANKRD36BQ8N2N9 1353 aa11.41□□□□□ -0.58
RN7SKP39-201ENST00000410773 TOGARAM1Q9Y4F4 1720 aa11.41□□□□□ -0.58
RN7SKP39-201ENST00000410773 SYTL4Q96C24 671 aaPredicted RBP11.41□□□□□ -0.58
RN7SKP39-201ENST00000410773 DDX54Q8TDD1 881 aaKnown RBP11.4□□□□□ -0.58
RN7SKP39-201ENST00000410773 KIAA1551Q9HCM1 1747 aa11.4□□□□□ -0.58
RN7SKP39-201ENST00000410773 TTC21BQ7Z4L5 1316 aa11.39□□□□□ -0.59
RN7SKP39-201ENST00000410773 PRIM1P49642 420 aaKnown RBP11.39□□□□□ -0.59
RN7SKP39-201ENST00000410773 UBR3Q6ZT12 1888 aa11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 PKD1L3Q7Z443 1732 aa11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 HSPA1AP0DMV8 641 aaKnown RBP11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 HSPA1BP0DMV9 641 aaKnown RBP11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 FSTL1Q12841 308 aa11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 STAC3Q96MF2 364 aa11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 FAM208AQ9UK61 1670 aaKnown RBP11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 N4BP2Q86UW6 1770 aaPredicted RBP11.38□□□□□ -0.59
RN7SKP39-201ENST00000410773 CENPJQ9HC77 1338 aaPredicted RBP11.37□□□□□ -0.59
RN7SKP39-201ENST00000410773 KIF13BQ9NQT8 1826 aa11.37□□□□□ -0.59
RN7SKP39-201ENST00000410773 PCDH10Q9P2E7 1040 aa11.37□□□□□ -0.59
RN7SKP39-201ENST00000410773 C4BP0C0L5 1744 aa11.37□□□□□ -0.59
RN7SKP39-201ENST00000410773 TTC21AQ8NDW8 1320 aa11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 MON2Q7Z3U7 1717 aa11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 C16orf71Q8IYS4 520 aaPredicted RBP11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 FLAD1Q8NFF5 587 aa11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 ANKRD24Q8TF21 1146 aa11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 USP47Q96K76 1375 aa11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 TNRC6CQ9HCJ0 1690 aaKnown RBP11.36□□□□□ -0.59
RN7SKP39-201ENST00000410773 PXDNLA1KZ92 1463 aa11.35□□□□□ -0.59
RN7SKP39-201ENST00000410773 BRCA1P38398 1863 aaKnown RBP11.35□□□□□ -0.59
RN7SKP39-201ENST00000410773 KCPQ6ZWJ8 1503 aa11.35□□□□□ -0.59
RN7SKP39-201ENST00000410773 AMIGO3Q86WK7 504 aa11.34□□□□□ -0.59
RN7SKP39-201ENST00000410773 C10orf71Q711Q0 1435 aa11.34□□□□□ -0.59
RN7SKP39-201ENST00000410773 PLEKHG2Q9H7P9 1386 aa11.33□□□□□ -0.6
RN7SKP39-201ENST00000410773 NBPF1Q3BBV0 1214 aa11.33□□□□□ -0.6
RN7SKP39-201ENST00000410773 RGPD2P0DJD1 1756 aa11.33□□□□□ -0.6
RN7SKP39-201ENST00000410773 ARFGEF1Q9Y6D6 1849 aa11.32□□□□□ -0.6
RN7SKP39-201ENST00000410773 ZNF692Q9BU19 519 aaPredicted RBP11.32□□□□□ -0.6
RN7SKP39-201ENST00000410773 USP31Q70CQ4 1352 aa11.31□□□□□ -0.6
RN7SKP39-201ENST00000410773 KTN1Q86UP2 1357 aaKnown RBP11.31□□□□□ -0.6
RN7SKP39-201ENST00000410773 MEGF6O75095 1541 aa11.31□□□□□ -0.6
RN7SKP39-201ENST00000410773 ARHGAP27Q6ZUM4 889 aa11.31□□□□□ -0.6
RN7SKP39-201ENST00000410773 BCS1LQ9Y276 419 aa11.31□□□□□ -0.6
RN7SKP39-201ENST00000410773 PHF14O94880 888 aa11.3□□□□□ -0.6
RN7SKP39-201ENST00000410773 C9orf131Q5VYM1 1079 aa11.3□□□□□ -0.6
RN7SKP39-201ENST00000410773 SMIM5Q71RC9 77 aa11.3□□□□□ -0.6
RN7SKP39-201ENST00000410773 PALLDQ8WX93 1383 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 NSD3Q9BZ95 1437 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 SMC1BQ8NDV3 1235 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 AK7Q96M32 723 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 TNRC18O15417 2968 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 EVC2Q86UK5 1308 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 KDM2BQ8NHM5 1336 aa11.29□□□□□ -0.6
RN7SKP39-201ENST00000410773 ITGB4P16144 1822 aa11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 SBF1O95248 1867 aa11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 NME9Q86XW9 330 aa11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 ZCRB1Q8TBF4 217 aaKnown RBP11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 LTV1Q96GA3 475 aaPredicted RBP11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 RRAGCQ9HB90 399 aa11.28□□□□□ -0.6
RN7SKP39-201ENST00000410773 A0A0G2JLW4 131 aa11.27□□□□□ -0.61
RN7SKP39-201ENST00000410773 HMGB2P26583 209 aaKnown RBP11.27□□□□□ -0.61
RN7SKP39-201ENST00000410773 FAM161AQ3B820 660 aa11.27□□□□□ -0.61
RN7SKP39-201ENST00000410773 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.27□□□□□ -0.61
RN7SKP39-201ENST00000410773 MAP2P11137 1827 aaKnown RBP11.27□□□□□ -0.61
RN7SKP39-201ENST00000410773 FCHSD2O94868 740 aa11.26□□□□□ -0.61
RN7SKP39-201ENST00000410773 MMP10P09238 476 aa11.26□□□□□ -0.61
RN7SKP39-201ENST00000410773 TGFB2P61812 414 aa11.26□□□□□ -0.61
RN7SKP39-201ENST00000410773 SSFA2P28290 1259 aa11.25□□□□□ -0.61
RN7SKP39-201ENST00000410773 IP6K1Q92551 441 aa11.25□□□□□ -0.61
RN7SKP39-201ENST00000410773 C4AP0C0L4 1744 aa11.25□□□□□ -0.61
RN7SKP39-201ENST00000410773 RAB3GAP2Q9H2M9 1393 aa11.25□□□□□ -0.61
RN7SKP39-201ENST00000410773 SBNO2Q9Y2G9 1366 aa11.25□□□□□ -0.61
RN7SKP39-201ENST00000410773 DPEP1P16444 411 aa11.24□□□□□ -0.61
RN7SKP39-201ENST00000410773 RNF181Q9P0P0 153 aa11.24□□□□□ -0.61
RN7SKP39-201ENST00000410773 CD163L1Q9NR16 1453 aa11.24□□□□□ -0.61
RN7SKP39-201ENST00000410773 FOXN1O15353 648 aa11.23□□□□□ -0.61
RN7SKP39-201ENST00000410773 MPRIPQ6WCQ1 1025 aa11.23□□□□□ -0.61
RN7SKP39-201ENST00000410773 LINC00116Q8NCU8 138 aa11.22□□□□□ -0.61
RN7SKP39-201ENST00000410773 PRDM10Q9NQV6 1147 aa11.22□□□□□ -0.61
RN7SKP39-201ENST00000410773 TIAM2Q8IVF5 1701 aa11.21□□□□□ -0.61
RN7SKP39-201ENST00000410773 KCNA3P22001 575 aa11.21□□□□□ -0.61
RN7SKP39-201ENST00000410773 DCAF5Q96JK2 942 aa11.21□□□□□ -0.61
RN7SKP39-201ENST00000410773 GNPATO15228 680 aa11.2□□□□□ -0.62
RN7SKP39-201ENST00000410773 SMARCC1Q92922 1105 aaPredicted RBP11.2□□□□□ -0.62
RN7SKP39-201ENST00000410773 EDC4Q6P2E9 1401 aaKnown RBP11.19□□□□□ -0.62
RN7SKP39-201ENST00000410773 CGNL1Q0VF96 1302 aa11.19□□□□□ -0.62
RN7SKP39-201ENST00000410773 HOXC9P31274 260 aa11.19□□□□□ -0.62
RN7SKP39-201ENST00000410773 CCDC87Q9NVE4 849 aa11.19□□□□□ -0.62
RN7SKP39-201ENST00000410773 MKRN1Q9UHC7 482 aaKnown RBP11.19□□□□□ -0.62
RN7SKP39-201ENST00000410773 MAP3K19Q56UN5 1328 aa11.18□□□□□ -0.62
RN7SKP39-201ENST00000410773 PCDH11XQ9BZA7 1347 aa11.18□□□□□ -0.62
RN7SKP39-201ENST00000410773 PCDH11YQ9BZA8 1340 aa11.18□□□□□ -0.62
RN7SKP39-201ENST00000410773 ZC3H4Q9UPT8 1303 aaKnown RBP11.18□□□□□ -0.62
RN7SKP39-201ENST00000410773 LOC102724428A0A0B4J2F2 783 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms