RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 IGSF1Q8N6C5 1336 aa13.79□□□□□ -0.2
LRRTM4-204ENST00000409884 NBPF6Q5VWK0 638 aa13.79□□□□□ -0.2
LRRTM4-204ENST00000409884 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
LRRTM4-204ENST00000409884 NBPF4Q96M43 638 aa13.79□□□□□ -0.2
LRRTM4-204ENST00000409884 EXOC6Q8TAG9 804 aa13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 BBXQ8WY36 941 aaPredicted RBP13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 SLIT3O75094 1523 aa13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 RGPD2P0DJD1 1756 aa13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 MTHFSDQ2M296 383 aaKnown RBP13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 MCM10Q7L590 875 aa13.78□□□□□ -0.2
LRRTM4-204ENST00000409884 SPATA31A3Q5VYP0 1347 aa13.77□□□□□ -0.2
LRRTM4-204ENST00000409884 ARHGEF10O15013 1369 aa13.77□□□□□ -0.2
LRRTM4-204ENST00000409884 CHRNA2Q15822 529 aa13.77□□□□□ -0.21
LRRTM4-204ENST00000409884 IPO4Q8TEX9 1081 aaKnown RBP13.77□□□□□ -0.21
LRRTM4-204ENST00000409884 CHMP4BQ9H444 224 aaKnown RBP13.77□□□□□ -0.21
LRRTM4-204ENST00000409884 EXOSC9Q06265 439 aaKnown RBP13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 NPM2Q86SE8 214 aaKnown RBP13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 PRDM4Q9UKN5 801 aa13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 TNS3Q68CZ2 1445 aa13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 KDRP35968 1356 aa13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 RGPD5Q99666 1765 aa13.76□□□□□ -0.21
LRRTM4-204ENST00000409884 MYH16Q9H6N6 1097 aa13.75□□□□□ -0.21
LRRTM4-204ENST00000409884 HAP1P54257 671 aaPredicted RBP13.75□□□□□ -0.21
LRRTM4-204ENST00000409884 RTL1A6NKG5 1358 aa13.75□□□□□ -0.21
LRRTM4-204ENST00000409884 KIF24Q5T7B8 1368 aa13.75□□□□□ -0.21
LRRTM4-204ENST00000409884 ANKRD24Q8TF21 1146 aa13.74□□□□□ -0.21
LRRTM4-204ENST00000409884 PPP4R2Q9NY27 417 aa13.74□□□□□ -0.21
LRRTM4-204ENST00000409884 TNNQ9UQP3 1299 aa13.74□□□□□ -0.21
LRRTM4-204ENST00000409884 SOS2Q07890 1332 aaPredicted RBP13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 ELL2O00472 640 aaPredicted RBP13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 GTF2E1P29083 439 aaPredicted RBP13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 RARSP54136 660 aaKnown RBP13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 CRBNQ96SW2 442 aa13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 USP35Q9P2H5 1018 aa13.73□□□□□ -0.21
LRRTM4-204ENST00000409884 FRAT1Q92837 279 aaPredicted RBP13.72□□□□□ -0.21
LRRTM4-204ENST00000409884 MIS18AQ9NYP9 233 aa13.72□□□□□ -0.21
LRRTM4-204ENST00000409884 TSPYL6Q8N831 410 aa13.72□□□□□ -0.21
LRRTM4-204ENST00000409884 MBIPQ9NS73 344 aa13.72□□□□□ -0.21
LRRTM4-204ENST00000409884 KIAA0232Q92628 1395 aa13.71□□□□□ -0.21
LRRTM4-204ENST00000409884 LTBP4Q8N2S1 1624 aa13.71□□□□□ -0.21
LRRTM4-204ENST00000409884 PHRF1Q9P1Y6 1649 aaKnown RBP13.71□□□□□ -0.21
LRRTM4-204ENST00000409884 IL16Q14005 1332 aa13.71□□□□□ -0.22
LRRTM4-204ENST00000409884 CALD1Q05682 793 aaKnown RBP13.71□□□□□ -0.22
LRRTM4-204ENST00000409884 KRT24Q2M2I5 525 aa13.71□□□□□ -0.22
LRRTM4-204ENST00000409884 TCERG1O14776 1098 aaKnown RBP13.7□□□□□ -0.22
LRRTM4-204ENST00000409884 ERBB3P21860 1342 aa13.69□□□□□ -0.22
LRRTM4-204ENST00000409884 ZNF853P0CG23 659 aa13.69□□□□□ -0.22
LRRTM4-204ENST00000409884 CRYBG1Q9Y4K1 1723 aa13.69□□□□□ -0.22
LRRTM4-204ENST00000409884 HSP90AA1P07900 732 aaKnown RBP13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 PANK1Q8TE04 598 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 LMOD3Q0VAK6 560 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 C8orf58Q8NAV2 365 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 CFAP44Q96MT7 982 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 IFT57Q9NWB7 429 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 NLRP2Q9NX02 1062 aa13.68□□□□□ -0.22
LRRTM4-204ENST00000409884 GNAI1P63096 354 aa13.67□□□□□ -0.22
LRRTM4-204ENST00000409884 RLBP1P12271 317 aa13.67□□□□□ -0.22
LRRTM4-204ENST00000409884 IL17REQ8NFR9 667 aa13.67□□□□□ -0.22
LRRTM4-204ENST00000409884 COL18A1P39060 1754 aa13.67□□□□□ -0.22
LRRTM4-204ENST00000409884 ROBO1Q9Y6N7 1651 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 CANXP27824 592 aaKnown RBP13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 GAS2L2Q8NHY3 880 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 RTF1Q92541 710 aaKnown RBP13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 PRDM11Q9NQV5 511 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 SMC4Q9NTJ3 1288 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 CRB1P82279 1406 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 CSB-PGBD3P0DP91 1061 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 PIP4K2BP78356 416 aa13.66□□□□□ -0.22
LRRTM4-204ENST00000409884 NHSL1Q5SYE7 1610 aa13.65□□□□□ -0.22
LRRTM4-204ENST00000409884 GNAT3A8MTJ3 354 aa13.65□□□□□ -0.22
LRRTM4-204ENST00000409884 LGR6Q9HBX8 967 aa13.65□□□□□ -0.22
LRRTM4-204ENST00000409884 VAMP4O75379 141 aa13.64□□□□□ -0.23
LRRTM4-204ENST00000409884 COG6Q9Y2V7 657 aa13.64□□□□□ -0.23
LRRTM4-204ENST00000409884 CHL1O00533 1208 aa13.64□□□□□ -0.23
LRRTM4-204ENST00000409884 RGS3P49796 1198 aa13.64□□□□□ -0.23
LRRTM4-204ENST00000409884 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.64□□□□□ -0.23
LRRTM4-204ENST00000409884 MPRIPQ6WCQ1 1025 aa13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 ZFP91Q96JP5 570 aaPredicted RBP13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 IPO9Q96P70 1041 aaKnown RBP13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 MAP3K5Q99683 1374 aa13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 TWISTNBQ3B726 338 aaPredicted RBP13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 ZNF530Q6P9A1 599 aaPredicted RBP13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 CAMTA1Q9Y6Y1 1673 aa13.63□□□□□ -0.23
LRRTM4-204ENST00000409884 NOB1Q9ULX3 412 aaKnown RBP13.62□□□□□ -0.23
LRRTM4-204ENST00000409884 CPDO75976 1380 aa13.62□□□□□ -0.23
LRRTM4-204ENST00000409884 ZBTB47Q9UFB7 747 aaPredicted RBP13.62□□□□□ -0.23
LRRTM4-204ENST00000409884 ABCA3Q99758 1704 aa13.61□□□□□ -0.23
LRRTM4-204ENST00000409884 NCAPD2Q15021 1401 aa13.61□□□□□ -0.23
LRRTM4-204ENST00000409884 SKAP1Q86WV1 359 aa13.61□□□□□ -0.23
LRRTM4-204ENST00000409884 STRN4Q9NRL3 753 aa13.61□□□□□ -0.23
LRRTM4-204ENST00000409884 TSPYL4Q9UJ04 414 aa13.61□□□□□ -0.23
LRRTM4-204ENST00000409884 TRIM27P14373 513 aa13.6□□□□□ -0.23
LRRTM4-204ENST00000409884 MEGF6O75095 1541 aa13.6□□□□□ -0.23
LRRTM4-204ENST00000409884 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
LRRTM4-204ENST00000409884 PLEKHO1Q53GL0 409 aaPredicted RBP13.59□□□□□ -0.23
LRRTM4-204ENST00000409884 CNKSR2Q8WXI2 1034 aa13.59□□□□□ -0.23
LRRTM4-204ENST00000409884 LMO7Q8WWI1 1683 aa13.59□□□□□ -0.23
LRRTM4-204ENST00000409884 FAM208AQ9UK61 1670 aaKnown RBP13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms